Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,105,376 IS2 (–) +5 bp intergenic (+83/‑34) csgC → / → ymdA curlin chaperone/uncharacterized protein YmdA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 381260 =NA (NA)23 (0.630) 22/486 0.6 91.8% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 1105376 = 2 (0.060)intergenic (+83/‑38) csgC/ymdA curlin chaperone/uncharacterized protein YmdA
* ? NC_000913 = 11053803 (0.080)30 (0.820) 27/488 0.4 90.7% intergenic (+87/‑34) csgC/ymdA curlin chaperone/uncharacterized protein YmdA
?NC_000913 1467910 = NA (NA)noncoding (1331/1331 nt) IS2 repeat region

AGCAAGAAAAGACCCTTTCATTGCCTGCTAATCAACCCATTGCTTTGACGAAGTTGAGTTTAAATATTTCCCCGGACGATCGGGTGAAAATAGTTGTTACTGTTTCTGATGGACAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTT  >  NC_000913/1105130‑1105625
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                     
aGCAAGAAAAGACCCTTTCAGTGCCTGCTAATCAACCCATTGCTTTGACGAAGTTGAGTTTAAATATTTCCCCGGACGATCGGGTGAAAATAGTTGTTACTGTTTCTGATGGACAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTTAAAGTATGGATAACACAACCCt                                                                                                                                                                                                                                                       <  2:294182/251‑1 (MQ=255)
     acgacagagaaagaactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAg                                                                                                                                                                                                                                                   <  1:232985‑M2/9‑1 (MQ=255)
           gagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACt                                                                                                                                                                                                                                            >  1:256728‑M2/236‑251 (MQ=255)
                ttCATTGCCTGCTAATCAACCCATTGCTTTGACGAAGTTGAGTTTAAATATTTCCCCGGACGATCGGGTGAAAATAGTTGTTACTGTTTCTGATGGACAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgccccta                                                                                                                                                                                                                                         <  1:191715‑M1/249‑15 (MQ=255)
                  tcttgcCTGCTAATCAACCCATTGCTTTGACGAAGATGAGTTTAAATATTTCACCGGACGATCGGATGAAAATAGTAGTTACTGTTTCTGATGGACAGTCACTTCATTTAACACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGTATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATATCCAAACCCTtggatttgcccctatatt                                                                                                                                                                                                                                     >  2:314432‑M1/3‑233 (MQ=255)
                  aactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctgtagattcagggggccagtctaACCCTCAAGGATGACTAATCAt                                                                                                                                                                                                                                      <  1:176085‑M2/22‑1 (MQ=255)
                   actggctggctgctacaccatgttgccgggcaacgatggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTg                                                                                                                                                                                                                                    <  1:283079‑M2/24‑1 (MQ=255)
                   actggctggctgctacaccatgttgcagggcaacgagggagaccgtcatccccggttcaaatctctgctgaacaattgcgatcttttcctttgtggtacaccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaacctagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGCCTAATCATTg                                                                                                                                                                                                                                    >  2:427921‑M2/228‑251 (MQ=255)
                   aTTGCCTGCGAATCAACCCAATGCTTTGACGAAGTTGAGTTTAAAGATTTCCCCGGACGATCGGGTGAAAAGAGTTGTTACTGTTTCTGATGGACAGTCACTTCAATTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAAGTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATTGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTggtatttgcccctatattt                                                                                                                                                                                                                                    <  2:379689‑M1/251‑20 (MQ=255)
                      ggctggccactccaccatgttgccgggcaacgagggataccgtcatcaccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTATTCATTGagc                                                                                                                                                                                                                                 <  2:218277‑M2/27‑2 (MQ=255)
                             aaTCAACCCATTGCTTTGACGAAGTTGAGTTTAAATATTTCCCCGGACGATCGGGTGAAAATAGTTGTTACTGTTTCTGATGGACAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatct                                                                                                                                                                                                                          <  1:7741‑M1/251‑30 (MQ=255)
                                     catgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGt                                                                                                                                                                                                                  >  1:143519‑M2/210‑251 (MQ=255)
                                          cTTTGACGAAGTTGAGTTTAAATATTTACCCGGACGATCGGGTGAAAATAGTTGTTACTGTTTCTGATGGACAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACACTtggatttgcccctatatttccagacatctgttatcacttaac                                                                                                                                                                                                             >  1:360293‑M1/1‑209 (MQ=255)
                                               aCGAAGTTGATTTTAAATATTTCCCCGTACGATCGGGTGAAAATAGTTGTTACTGTTTCTGATGGCCAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAATCCTtggatttgctcctatatttccagacatctgttatcacttaacccatt                                                                                                                                                                                                        <  2:350281‑M1/251‑48 (MQ=255)
                                                    cgagggagaccgtcatccccggttcaaagctccgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTaa                                                                                                                                                                                                   <  1:184775‑M2/57‑1 (MQ=255)
                                                         gagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAActct                                                                                                                                                                                              >  1:297890‑M2/190‑251 (MQ=255)
                                                              cgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTAt                                                                                                                                                                                         <  1:439282‑M2/67‑1 (MQ=255)
                                                                tcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGc                                                                                                                                                                                       >  1:233909‑M2/183‑251 (MQ=255)
                                                                 catccccggttcaaagctcttctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaatacatcaatcttctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGATGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGCt                                                                                                                                                                                      <  2:101053‑M2/70‑1 (MQ=255)
                                                                  atccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGCTc                                                                                                                                                                                     >  1:54333‑M2/181‑251 (MQ=255)
                                                                             aaagctctgctgaacaattgcgatcctttcctgtttggtacgccgtctgcgtttctccggccctaatacatcaatcatctgttctccaatgtctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAAGAAATGTTCAGACCTTTTTTAAACTCTCTTATGCTCGGCAgtttgtt                                                                                                                                                                          <  2:273768‑M2/82‑1 (MQ=255)
                                                                              aTCGGGTGAAAATAGTTGTTACTGTTTCTGATGGACAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggc                                                                                                                                                                         >  1:279645‑M1/1‑173 (MQ=255)
                                                                                     gctgaacaatttcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagcctatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGCTGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAAATCTCTTATGCTCGGCCTTTTGTTTTTTCCtt                                                                                                                                                                  >  2:377944‑M2/162‑251 (MQ=255)
                                                                                                           gATGGACAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGc                                                                                                                                              <  1:23709/249‑1 (MQ=255)
                                                                                                              ggACATTCACTTCATTTCTCACAACAATCGCCGCACTCTTCAGAACAGTCTTAATTTGTTGCAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGATTCAGCCAACATGAAAGTATGGATAACACAACCCTtggatttgaccctatatttccagacatctgatatcacttaacccattacaagcccgctgccgcagatatatccgtggcgagcgataacccagctacctatgcggatgac                                                                                                                                          >  2:393043‑M1/1‑141 (MQ=255)
                                                                                                               ttggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTTCTGGAAGCACCGt                                                                                                                                         <  1:141432‑M2/115‑1 (MQ=255)
                                                                                                               gACAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagctataccccagcgcactatgcggatgccat                                                                                                                                        >  2:130501‑M1/1‑140 (MQ=255)
                                                                                                                 ggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGc                                                                                                                                       <  1:199795‑M2/117‑1 (MQ=255)
                                                                                                                    tCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGCTGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtt                                                                                                                                   >  1:273983‑M1/1‑135 (MQ=255)
                                                                                                                    acgccgtctgcgtttctccggccctaggacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACACTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTCTGCTCGGCAGTTTGTTTTTTCATTTTATTGCAATTTCTGGAAgcaccgttcatgg                                                                                                                                   >  2:11174‑M2/131‑245 (MQ=255)
                                                                                                                        ttCATTTATCACAACAATGGCCTCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGCAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgctaacccagcgcactatgcggatgccattcgttata                                                                                                                                >  1:290059‑M1/1‑131 (MQ=255)
                                                                                                                           aTTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcccttcgttataatgc                                                                                                                            >  2:451256‑M1/1‑128 (MQ=255)
                                                                                                                             cattataacgaatggccgccctCTTCAGAAAAGTCTTAATTTGTTGAAATATCGGGCATAAGATGAATCTGGCGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagaaatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgaaaacccagcgcactatgcggataccattcgttataatg                                                                                                                             >  2:382651‑M1/11‑126 (MQ=255)
                                                                                                                             cattataacgaatggccgccctCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatg                                                                                                                             <  1:382651‑M1/238‑123 (MQ=255)
                                                                                                                                            ccgcctacatcaagaaagtctgaatttggtgAAAAATCGAGCATAAGATGAATCTGGAGCGAATGGTCTGCTGCGAATCAGCCAACCTGAAATTATGGATAACACAACCCTgtgatttgcccctaaagttccagacagctgttatcacttaacccattacaagcccgctgccggagatattcccgttgcgagcgataacccagcgcactatgcggatgccattcgttagaatgctcgaacgcttctgcaag                                                                                                           <  2:208851‑M1/237‑141 (MQ=255)
                                                                                                                                               cccTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggtt                                                                                                        >  1:446958‑M1/1‑108 (MQ=255)
                                                                                                                                               cccTCTTCAGAAAAGTCATAAATTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAAAGTTCTTCTGCGAACCAGCCAACCTGAAAGTATGGATAACACACCCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgttgcgagcgataacccatcgcactatgctgaggccattcgttataatgctcgaacgcctctgcaaggtt                                                                                                        <  2:195265‑M1/251‑144 (MQ=255)
                                                                                                                                                ccgcgtcagaaAAGTCGTAATTTGTTGAAATATCGAGCATAAGATGAAGCTGGAGAGAATGGTCTGCGGCGAAGCAGCCAACCTTAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttagcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggttgccattcgttagaatgcgcgaacgcctctgcaaggttc                                                                                                       <  1:406411‑M1/246‑145 (MQ=255)
                                                                                                                                                                       gttgAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCAAACCTGAAAGTATGGAAAACACATCCCTtggatgtgcccctatatttccagacatctgttatcacttaacccattacaagcccgcagccgcagatatgcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttcttggatgccgttaccccgtctgg                                                                                <  2:115586‑M1/251‑168 (MQ=255)
                                                                                                                                                                         tgAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggt                                                                               <  1:130501‑M1/250‑169 (MQ=255)
                                                                                                                                                                         tgAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATTCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGc                                                                               >  1:17393/1‑250 (MQ=255)
                                                                                                                                                                          tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggcaagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCAc                                                                             >  1:218808‑M2/77‑251 (MQ=255)
                                                                                                                                                                          gAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggttt                                                                             <  1:225477‑M1/251‑171 (MQ=255)
                                                                                                                                                                            gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACATTTTTTAAACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGTGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCAccc                                                                           <  1:152811‑M2/177‑1 (MQ=255)
                                                                                                                                                                               atCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggc                                                                         >  1:265014‑M1/1‑76 (MQ=255)
                                                                                                                                                                                   aGCATAAGATTCATCTGGAGAGCATGGTCTGCTGAGACTAAGCAAACCTGCAAGTCTGGATAACACAACCCTtggatttgcccctctatttccagccatctgttatcacttaacccattacaagcccgctgccgcagctattcccgtggcgagcgataacccagcgcactatgcggatgccattcgatataatgctcgaaccccactgcaaggttctttgccgccgttaacccgtatggtttgtgcatcat                                                                    >  2:407417‑M1/1‑72 (MQ=255)
                                                                                                                                                                                        aaGATGAATCTGGAGAGAATGGGCTGATGCGAATCAGCCAACCTGACAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcacgctgccgcagatattcccgtgccgtgcgataccccagcgcactatgcggatgccattcgttataatgctcgaacgactctgcaatgttctttgctgccgttacacggtctggtttgggcatgatactgt                                                               >  2:143086‑M1/1‑67 (MQ=255)
                                                                                                                                                                                                   atcacttatttaagtgatattggttgtctggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAAc                                                    <  1:92117‑M2/200‑1 (MQ=255)
                                                                                                                                                                                                    gagagaATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgct                                                   >  1:4791‑M1/1‑55 (MQ=255)
                                                                                                                                                                                                     agagaATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctt                                                  >  1:276556‑M1/1‑54 (MQ=255)
                                                                                                                                                                                                      gagaATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgcttt                                                 >  1:307197‑M1/1‑53 (MQ=255)
                                                                                                                                                                                                                             ccAACCTGAAAGTATGGATAACACAACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgc                          >  1:176497‑M1/1‑30 (MQ=255)
                                                                                                                                                                                                                                ggagattcagggggccagtctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCggg                          <  1:224682‑M2/226‑1 (MQ=255)
                                                                                                                                                                                                                                           tGGATAACACCACCCTtggatgtgaccctatatttccagacatctgttataacttaacccattataatcccgcggccgcagatattaccgttgcgagcgataacccagcgcaatatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctatgctgccgttaacccgtctggtttgggcatgatactgatttagtcacgctttatcgttttcacgaagctctctgctatgccgttacgc             <  2:379494‑M1/250‑235 (MQ=255)
                                                                                                                                                                                                                                                   ctaACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTACACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCg    >  1:30295‑M2/4‑251 (MQ=255)
                                                                                                                                                                                                                                                   acaACCCTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctccggactc    >  1:380646‑M1/1‑8 (MQ=255)
                                                                                                                                                                                                                                                     aaCCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGtt  <  1:10908/251‑1 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                     
AGCAAGAAAAGACCCTTTCATTGCCTGCTAATCAACCCATTGCTTTGACGAAGTTGAGTTTAAATATTTCCCCGGACGATCGGGTGAAAATAGTTGTTACTGTTTCTGATGGACAGTCACTTCATTTATCACAACAATGGCCGCCCTCTTCAGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTCAAGGATGACTAATCATTGAGGAAATAGAATAAATGTTCAGACCTTTTTTAAACTCTCTTATGCTCGGCAGTTTGTTTTTTCCTTTTATTGCCATTGCTGGAAGCACCGTGCAAGGGGGCGTGATCCATTTTTATGGCCAAATTGTGGAACCGGCATGTGACGTCAGCACCCAGTCATCACCCGTAGAAATGAACTGCCCACAGAATGGTTCTATTCCGGGCAAAACCTACTCCAGCAAAGCGTT  >  NC_000913/1105130‑1105625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.