Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,938,983 IS2 (–) +5 bp coding (757‑761/993 nt) rbsR → DNA‑binding transcriptional dual regulator RbsR

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3938983 =0 (0.000)33 (0.760) 27/486 0.6 100% coding (757/993 nt) rbsR DNA‑binding transcriptional dual regulator RbsR
?NC_000913 4498181 = NA (NA)noncoding (1/1331 nt) IS2 repeat region
* ? NC_000913 = 39389870 (0.000)41 (0.950) 33/486 0.3 100% coding (761/993 nt) rbsR DNA‑binding transcriptional dual regulator RbsR
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

TGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGAACGCGGTTCGGCTTAGATTTACG  >  NC_000913/3938741‑3939226
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                   
tacgccagagaaataactggctggctgctacaccatgttgccgggcaacgagggtgaccgtcatccccggttcaaagctatgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctagttttcca                                                                                                                                                                                                                                              >  2:88667‑M1/243‑246 (MQ=255)
     cagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGtt                                                                                                                                                                                                                                        <  1:282043‑M1/14‑1 (MQ=255)
               actggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCa                                                                                                                                                                                                                              >  1:412691‑M1/228‑251 (MQ=255)
                          gctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctggtctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatagtggttttctggagattcagggggccagtctaGTGTACCAGGCGTTATATCAGGCAGAGTTACAg                                                                                                                                                                                                                     >  2:289201‑M1/217‑249 (MQ=255)
                             atgctatgtctctcggcaactagggagtccctcattcccggttcaaacctctgctgaacaattgcgatcttttcctgcgtggtacgccgtctgcgtttctccggccctaagacatcaatcatcttttctccaatgacgagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGTCAGAGTtacagtttc                                                                                                                                                                                                                 >  2:257627‑M1/214‑246 (MQ=255)
                                aTTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatca                                                                                                                                                                                                             <  1:192017‑M1/251‑37 (MQ=255)
                                 catgttgccgggcaacgagtgagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAg                                                                                                                                                                                                            >  1:200547‑M1/210‑251 (MQ=255)
                                 catgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagtgggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAg                                                                                                                                                                                                            >  2:89478‑M1/210‑251 (MQ=255)
                                  tACCGGCCCGCGGGAGAAAACTCCGGCGCGCTTGCGGGTGGAAGGTTATCGGGGGGCGATGAAACGTGCGGGTCTCAACATTCCTGAGGGCTATGAAGTCCTTGGTGATTTTGAATTTAACGGCGGTTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGCTTAtggatttgcccctatatttccatacatctgttatcac                                                                                                                                                                                                            <  2:35929‑M1/250‑38 (MQ=255)
                                           ggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGCTATCGCgg                                                                                                                                                                                                  <  1:355356‑M1/52‑1 (MQ=255)
                                            gcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGt                                                                                                                                                                                                 >  1:56227‑M1/199‑251 (MQ=255)
                                            gcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGt                                                                                                                                                                                                 >  1:54651‑M1/199‑251 (MQ=255)
                                                  agacctcgtgcgtgcctgcggttggaatGTTACCGGGCGGCGATGAAACGTGCGGGTCTCAACATGCCTTATGGCTATGAAGTCACTGGTGATTTTGAAGTTAACGGCGGGTTTTACGCTATGCGCCAACTGCTATCGCATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttagcacttaacccattacaatc                                                                                                                                                                                            <  2:237127‑M1/237‑54 (MQ=255)
                                                       cccgGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTAAGCGCCAACTGCTATCACATCCGCTTCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctg                                                                                                                                                                                      <  2:335445‑M1/250‑60 (MQ=255)
                                                        ccGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct                                                                                                                                                                                       <  1:195367‑M1/249‑59 (MQ=255)
                                                            tcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaacaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGAAATCGCGGTGATTGGCTATGACGat                                                                                                                                                                                 <  2:169354‑M1/69‑1 (MQ=255)
                                                                ccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATc                                                                                                                                                                              >  1:190583‑M1/179‑250 (MQ=255)
                                                                ccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCg                                                                                                                                                                             <  2:8236‑M1/73‑1 (MQ=255)
                                                                   cggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtccgccgtctgcgtttctccggccctaagacatcaatcctctgttctccaatgactagtctacacaatagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggcaagtctaGTTTCCCAGGAGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCTGTGCTTGGATCTAACGATATCGAAc                                                                                                                                                                          <  2:211881‑M1/76‑1 (MQ=255)
                                                                              gTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCGATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagc                                                                                                                                                               <  1:55302‑M1/251‑83 (MQ=255)
                                                                                         gcgATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagc                                                                                                                                                    <  1:313019‑M1/251‑94 (MQ=255)
                                                                                         attgctatcttttcctgtgtggtacgccgtctgcgttgctccggccctaagacatcaatcatcttttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGccacc                                                                                                                                                    >  1:278536‑M1/154‑251 (MQ=255)
                                                                                            aTGAAAGGTGCGGGTCTCAACATTCCTGAGGGCTAGGAAGCCCCTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgca                                                                                                                                                 <  2:117001‑M1/251‑97 (MQ=255)
                                                                                              gAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcact                                                                                                                                               <  1:428250‑M1/251‑99 (MQ=255)
                                                                                                 aCGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatg                                                                                                                                            <  1:162268‑M1/251‑102 (MQ=255)
                                                                                                       gggTATCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACGGCTATCACATCCGCTGCGTCCTCAGGCCGTCTGTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagacagtcccgtggcgagcgataacccagcgcactatgcggatg                                                                                                                                      <  2:83504‑M1/251‑108 (MQ=255)
                                                                                                              aacactacggtaggctatgaagtcacTGGTGATTTTGAACTTCAAGGCGGGTTTGACGTTATGCGACAACTGCTATCACATCCGCTGTGTCCGCTGGCCGTCTTTACCGTAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttacagaaatctgttatcacttaccccattacaagccctctgccgcagatattcccgtggcgagcgataacccagagcactatgcggatgccattct                                                                                                                               <  2:128154‑M1/239‑115 (MQ=255)
                                                                                                                acgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCg                                                                                                                              >  1:440562‑M1/131‑250 (MQ=255)
                                                                                                                         gcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAAc                                                                                                                    >  1:100466‑M1/122‑251 (MQ=255)
                                                                                                                               ctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTggggg                                                                                                              <  1:344661‑M1/136‑1 (MQ=255)
                                                                                                                                     ccctgGTGAGTTTGAATTTAACGGCGGGTTTGAAGCTATGCGCCAACTGCTATCACTGCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggagttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggaggccattcgttataatgctcgaacgcctctt                                                                                                         <  2:304055‑M1/248‑137 (MQ=255)
                                                                                                                                           gacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTg                                                                                                  >  1:157976‑M1/104‑251 (MQ=255)
                                                                                                                                                caatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGGGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCTCCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTa                                                                                             >  1:215454‑M1/99‑251 (MQ=255)
                                                                                                                                                aaatcctctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGCTATCGAACTGGCAAGCTTTATGACGCCACCATTAACCCCTAACCACCACCCGAAAGATGAACTGGGGGAGCTGGCGATTgattt                                                                                              <  2:157432‑M1/152‑3 (MQ=255)
                                                                                                                                                 tGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttat                                                                                                                           <  1:141665‑M1/220‑119 (MQ=255)
                                                                                                                                                  gAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCGGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGGTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggattccattcgttataatgctcgaactcctctgcaaggttcgttgc                                                                                            <  2:282036‑M1/250‑150 (MQ=255)
                                                                                                                                                    catctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTca                                                                                         >  1:329474‑M1/95‑251 (MQ=255)
                                                                                                                                                      ttAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgcc                                                                                        <  1:159982‑M1/250‑154 (MQ=255)
                                                                                                                                                         gttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTcat                                                                                        >  2:395230‑M1/90‑247 (MQ=255)
                                                                                                                                                              gggTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac                                                                                                                <  1:107967‑M1/218‑130 (MQ=255)
                                                                                                                                                                  ttGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctg                                                                           >  1:186535‑M1/1‑85 (MQ=255)
                                                                                                                                                                  tgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTTGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAAcc                                                                           <  1:74180‑M1/171‑1 (MQ=255)
                                                                                                                                                                       gCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgcatggtttg                                                                      >  1:288969‑M1/1‑80 (MQ=255)
                                                                                                                                                                              aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATc                                                                                                                                                                              >  2:47752‑M1/69‑140 (MQ=255)
                                                                                                                                                                              aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATc                                                                                                                                                                              <  1:47752‑M1/72‑1 (MQ=255)
                                                                                                                                                                                  aCTGCTATCACATCCGCGGCGTCCTCTGGCCGGCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacctctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgtatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatact                                                           <  1:316547‑M1/251‑183 (MQ=255)
                                                                                                                                                                                    tGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactg                                                          >  2:233229‑M1/1‑67 (MQ=255)
                                                                                                                                                                                      cTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgggcgctaacccagcgcactatgcggctgccattcgttataatgctcgcacgcctctgcaagggtcttttctgccgttaacccctctggtttgggcatgcacctggtg                                                       >  2:217989‑M1/1‑65 (MQ=255)
                                                                                                                                                                                        aTCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTCtggatttgcccctatatttccagccatctgttatcacttaacccattacaagcccgctgccgccgatcttcccgtggcgctcgataacccagcgcactatgcggttgccattcgttataatgatagaacgactctgcaaggtttttttctgccgttaacccgtctggcttgggcatgatactgctgt                                                      >  2:241‑M1/1‑63 (MQ=255)
                                                                                                                                                                                        aTCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatg                                                       <  1:59728‑M1/249‑187 (MQ=255)
                                                                                                                                                                                             aTCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgcgcgataacccagcgcactatacggatgccattcgttataatgctcgaacgcctctgcaaggctctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcac                                                >  1:258963‑M1/1‑58 (MQ=255)
                                                                                                                                                                                             aTCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatatagtcac                                                >  1:81487‑M1/1‑58 (MQ=255)
                                                                                                                                                                                                 gCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGGTGGCGCTGTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgtcgagcgctaacacagcgcactatgcggatgccattcgttataatgctcgcacgactctgcaaggttcattgctgccgataacccgtctggtttgggcattatactgattcaaccacgctt                                            >  2:139226‑M1/1‑54 (MQ=255)
                                                                                                                                                                                                 gCTGCGTCCTCAGACCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtaacgctt                                            >  1:126395‑M1/1‑54 (MQ=255)
                                                                                                                                                                                                 cacttatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAAc                                            <  1:115107‑M1/202‑1 (MQ=255)
                                                                                                                                                                                                     tatttaagtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTAc                                        <  1:100061‑M1/206‑1 (MQ=255)
                                                                                                                                                                                                         cTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttt                                    >  1:176846‑M1/1‑46 (MQ=255)
                                                                                                                                                                                                           agtgatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGAt                                  <  1:134839‑M1/212‑1 (MQ=255)
                                                                                                                                                                                                             ggctgtcttTACCGGAAAAGACGCTATGGCTGTTGGCGTGTAtggattagcccctatatttccagacatctgttataacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactaggcggatgccattcgttagaatgcgcgaacgcctctgcatggttctttgctgccgttaacacgtctggtttgggcatgatactgaggtaggcacgctttatcgttttctc                                <  2:18169‑M1/247‑210 (MQ=255)
                                                                                                                                                                                                              gatattggttgtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCt                               >  1:405727‑M1/37‑251 (MQ=255)
                                                                                                                                                                                                                 gTCTTTACCGGAATTGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacctctgttatcacttaacccattccaagcccgctgccgcagatattcccatggcgatcgataccccagcgcactaggcggatgccattcgttataatgctcgaccgcctctgcacggttctttgcttccgttcacccgtcttgtttgggcattgtactgctgtagtcccgctttatcgttttcacta                              >  2:120362‑M1/1‑38 (MQ=255)
                                                                                                                                                                                                                 gTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaag                            <  1:35621‑M1/251‑214 (MQ=255)
                                                                                                                                                                                                                 gTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaac                            >  1:164175‑M1/1‑38 (MQ=255)
                                                                                                                                                                                                                   cTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagct                          >  1:12001‑M1/1‑36 (MQ=255)
                                                                                                                                                                                                                   cTTTACCGGAAATCACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagct                          >  1:125371‑M1/1‑36 (MQ=255)
                                                                                                                                                                                                                     ttagcggaaATGACGGTATGGCTGTTGGCTTTTAgggatttgcccctatatttcccgacctctgttatcacttaacccattacaagccctctgccgcagatattcccgtggcgagcgataacccagcgcactatgctgatgccattcgttataatgctcgaactcctctgcaagggtctttgctgccgttaacccggctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagc                           <  1:441307‑M1/244‑215 (MQ=255)
                                                                                                                                                                                                                       aCCGGAAATGACGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctc                       <  1:213199‑M1/250‑219 (MQ=255)
                                                                                                                                                                                                                        gtctggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGAAcg                      >  1:265959‑M1/27‑250 (MQ=255)
                                                                                                                                                                                                                            ggagattcagggggccagtctaGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGAACGCGGtt                 <  1:271661‑M1/229‑1 (MQ=255)
                                                                                                                                                                                                                                  cGCTATGGCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactattcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgtt           >  1:112559‑M1/1‑21 (MQ=255)
                                                                                                                                                                                                                                       gggccagtctaGTTTACCAGGCTGTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGAATGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACGTACTCCGATTCTGATGGAACGCGGTTCGGCTTAGAtt      >  2:22530‑M1/12‑251 (MQ=255)
                                                                                                                                                                                                                                        ggCTGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctc     >  2:75209‑M1/1‑15 (MQ=255)
                                                                                                                                                                                                                                           tGTTGGCGTTTAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttcctctccgg  >  2:424718‑M1/1‑12 (MQ=255)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                   
TGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGAACGCGGTTCGGCTTAGATTTACG  >  NC_000913/3938741‑3939226

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.