| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,521,130 | Δ122 bp | valY | valY | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2521130 | 2521251 | 122 | 25 [0] | [5] 30 | valY | valY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2521129 | 0 (0.000) | 25 (0.780) | 21/326 | 0.5 | 100% | intergenic (+3/‑44) | valX/valY | tRNA‑Val/tRNA‑Val |
| ? | NC_000913 | 2521252 = | 0 (0.000) | intergenic (+4/‑1) | valY/lysV | tRNA‑Val/tRNA‑Lys | |||||
ACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCG > NC_000913/2521007‑2521497 | gttgactcattttgaactctccctataatgcgactccacacagcgggggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccaactactttatgtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTc < 1:16641‑M2/6‑1 (MQ=255)gttgactcattttgaaccctccctataatgctactccccacagcgggggtgattagcacagctggtagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccaactactttatgtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaatgagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTc < 1:349224‑M2/6‑1 (MQ=255) cctataatgcgactccacacagcgggggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccaactactttatgtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTTGCTCAGTTGGTAGAGc > 1:121562‑M2/225‑250 (MQ=255) cgtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccaactactttatgtattcgccgctgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggatggggtcggcggttcgagcccgtcatcacccatcacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGt < 1:44724‑M2/48‑1 (MQ=255) gtttacctcatctgggtgggcacctccctgacaagggggggggcggcggttcgattccgtcagcacccgccaactactttatgtagtctccgccgtgtagcaagacattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatctcccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGtt < 2:359109‑M2/56‑1 (MQ=255) gattagctcagctgggagagcaccttccttacaaggagggggtcggcggttcgatcccgtcatcacccaccaactactttatgtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGtt < 1:289082‑M2/56‑1 (MQ=255) aggagagcacctaccttacaaggagggggtcggcggttcgatcccgtcatcacccaccaactactttaagtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagcttggagagcacctcccttacaaggagggggtcgtcggttcgatcctgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAGCAATTGGTCGCAGGTTCGAATCCTGCAc < 1:205826‑M2/68‑1 (MQ=255) tacaaggagggggtcggcggttcgatcccgtcatcacccaccaactactttatgtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccactgCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATGGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaa < 2:315764‑M2/83‑1 (MQ=255) aagagggggtcggctgttcgatcccgtcatcacccaccaactactgtatgtagtctgcgccgtgtagcaagaaattgagacgtgggtgattagctcagctgggagagcacctcccttacaaggaggggttcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTTGTAGAGCAGTTGACTTTTAATCAGTGGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAgc < 1:319502‑M2/89‑1 (MQ=255) cggctggtcgatcccgtcatcacccaccaactactttatgtaatctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAgg < 2:398809‑M2/99‑1 (MQ=255) gcggttcgatcccgtcatcacccaccaactacgttatgtagtcgccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgcg < 2:141228‑M2/101‑1 (MQ=255) gcggttcgatcccgtcatcaaccaccaactactttatgtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgcg < 2:95190‑M2/101‑1 (MQ=255) gttcgatcccgtcaacaccccccaactactttatgtattctccgccgtgtagcaagaaagtgagaagtgggtgattagctcagttgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcccccaccccttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGCCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCtt < 1:495589‑M2/104‑1 (MQ=255) cgatcccgtcatcacccaccatatactttatgtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCtttt < 1:281652‑M2/106‑1 (MQ=255) gatcccgtcatcacccaccacctactttatgtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttagatcccgtcatcacccaccacttCGGGTCGTTAGCTCCGTTGGTAGAGCAGTTGAATTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCtttttt > 1:429678‑M2/144‑251 (MQ=255) catcacccaccaactactttatgtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCTCTTTTTTACTATCt < 1:145974‑M2/115‑1 (MQ=255) catcaaccaccaactactttatgtagtctccgccgtgtagcaagaaatggagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgagcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCATGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCt < 1:303317‑M2/115‑1 (MQ=255) cacccaccaactactttatgtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCg < 1:465557‑M2/118‑1 (MQ=255) actactttatgtagtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAg < 1:249558‑M2/128‑1 (MQ=255) atgtattccccgccgtgtagcaagaaattgaaaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAAc < 2:119756‑M2/136‑1 (MQ=255) gtctccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAGCCTgca < 2:214295‑M2/141‑1 (MQ=255) tccgccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGGCGATAGCACAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGACGCAAGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAAGAGCTTTTTTAATATCTGCGATACTCAAAAATTCGAACCTgcagc > 2:306869‑M2/108‑250 (MQ=255) gccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccccttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAAGTTCGAATCCTGCACGGCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGt > 1:51884‑M2/105‑251 (MQ=255) gccgtgtagcaagaaattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGt < 2:108848‑M2/147‑1 (MQ=255) aattgagaagtgggtgattagctcagctgggagagcacctcccttacaaggagggggtcggcggttcgatcccgtcatcacccaccacttCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCa < 1:368677‑M2/161‑1 (MQ=255) tGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGAGGGTCGATACCGTCATCCCCAACAAATTGGGGTCGGTCTCTCAGTTGGTAGAGCAGTTGACATTTAATCAAATGGGCGCAGAGTCGAAACCTGCCAGAACCACCAATGTAAAAAAGCGCCCTAAAGTAGCTTTTTTACTATCTTCGATACTAAAAGATTTGAACCTGCAGCAGGTTTGACTTGCGCGCAACGAaacaa > 2:503785/1‑250 (MQ=16) gggTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGTGGTCGTCGGTTCGATCCCGGCATCTCCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACGCAAAGATTCGAACCTGCAGCAGGTTGGAGTTGATCGCAGCGAAACAACg < 2:215812/251‑1 (MQ=18) catcgtgccctacTTCGGATCGTTAGATCATTGGGTAGAGCAGTTGACTTTTAATCAAAAGGTCGCAGGATAGAATCCTGTAAGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGAGCCGAACCGGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACTGCCCGATGGGCGAGCGAAGCGAGTCATCCTGCACAACCCTCCAATg < 2:121562/240‑1 (MQ=11) ccaccaCTTCGGGGCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATACTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGAGAGTCATCCTGCACGACCCACCAATGTaaaa > 1:327096/1‑250 (MQ=255) cacTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAgcg < 1:306869/251‑1 (MQ=33) | ACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTACTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTAAAAAAGCG > NC_000913/2521007‑2521497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |