Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,291,049 IS1 (+) +9 bp coding (808‑816/1014 nt) rssB → regulator of RpoS

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)31 (0.550) 29/492 0.8 93.7% noncoding (768/768 nt) IS1 repeat region
?NC_000913 1291049 = 2 (0.040)coding (808/1014 nt) rssB regulator of RpoS
* ? NC_000913 = 258675NA (NA)41 (0.730) 38/492 0.5 95.2% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 1291057 2 (0.040)coding (816/1014 nt) rssB regulator of RpoS

ATTGCCGCACTTTCGGAAAACGATCTGGCATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGAATGAGCAAACGATAACGCGGGCTAAATTTGCATTACCTGCTAATGTCGGCTGGTGG  >  NC_000913/1290809‑1291307
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                          
gacgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGaa                                                                                                                                                                                                                                                          <  2:374314‑M2/11‑1 (MQ=255)
 acgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGaaa                                                                                                                                                                                                                                                         <  1:418904‑M2/12‑1 (MQ=255)
    tggtgttatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgcattgagcggcataacctgaatctgaggcagcacctggcacggctgggccggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaccactatcaataagttggagtcattaccCGAGAACTGAAAAAt                                                                                                                                                                                                                                                      >  2:101823‑M2/237‑251 (MQ=255)
        gatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacggaatcatcaagcgatatacgcagcgaattgagtggcatatcctgaatctgaggcagcacctggcacgggtgggacggaagtcgctgtcgttcgcaaaatcggtggagctggatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAAtctc                                                                                                                                                                                                                                                   <  1:67856‑M2/18‑1 (MQ=255)
        cctTTCGGAAAACGATCTGGCATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctg                                                                                                                                                                                                                                                  >  2:134772‑M2/2‑241 (MQ=255)
               gAAAACGATCTGGCATTTAATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTAGCCGCATTGCTTGACGGCTTCTTACAGGAACAGCTTGCACACCAACATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAAACATTTACTTCGTCAGGCCAATCTGCAGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaactt                                                                                                                                                                                                                                           <  1:216661‑M2/251‑18 (MQ=255)
                 aaaCGATCTGGCATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttac                                                                                                                                                                                                                                         <  1:416973‑M2/251‑20 (MQ=255)
                   aCGATCTGGCATTTTATTGCCTTGATGTCACCCGAGCTGGACATACTGGCGTACTTGCTGCCTTGTTATTCCGCGCATTGTTTAACGGATTATTACAGGCACAGCTTGCACACCAAAATCAACGGTTGCCCGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactg                                                                                                                                                                                                                                       <  1:231519‑M2/251‑22 (MQ=255)
                        cTGGCATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTCGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgattt                                                                                                                                                                                                                                   <  1:261118‑M2/250‑26 (MQ=255)
                          ggCATTTTATTGCCTTGATGTCTCCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGc                                                                                                                                                                                                                                     <  1:191256/246‑1 (MQ=255)
                            ggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCt                                                                                                                                                                                                                               <  2:62732‑M2/38‑1 (MQ=255)
                               tttATTGCCTTGATGTCACCCGAGCTGGACATACTGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGCACTGggtgatgctgccaacttactgatttagtgtatg                                                                                                                                                                                                                           <  2:506781‑M2/251‑34 (MQ=255)
                                         tGATGTCACCCTAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCATACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGTGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgttt                                                                                                                                                                                                                  >  1:354636‑M2/1‑208 (MQ=255)
                                         tGATGTCACCCGAGCTGGACATAATGGCGTTCTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGtgtgatgctgccaacttactgatttagtgtatgatggtgttt                                                                                                                                                                                                                  >  2:479496‑M2/1‑208 (MQ=255)
                                              gcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATAcc                                                                                                                                                                                                            >  1:265154‑M2/195‑251 (MQ=255)
                                                  ccGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                                                                                                                                                                                        >  1:346162‑M2/1‑199 (MQ=255)
                                                     aGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAac                                                                                                                                                                                                     >  1:103996/1‑251 (MQ=255)
                                                      gCTTGACATAATGGCTTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccag                                                                                                                                                                                                    >  2:139049‑M2/1‑195 (MQ=255)
                                                               aaTGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGGTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct                                                                                                                                                                                            >  1:43349‑M2/1‑186 (MQ=255)
                                                                   taatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATc                                                                                                                                                                                       >  1:215265‑M2/174‑251 (MQ=255)
                                                                       cagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGt                                                                                                                                                                                    >  2:152234‑M2/170‑250 (MQ=255)
                                                                             tgcCTTGTTATTACGCGCATTGTTTAACGGATTATTACATGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt                                                                                                                                                                             <  1:100594‑M2/251‑80 (MQ=255)
                                                                             tgcCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttggggtgctccggtggcttctgtttctatcagttgt                                                                                                                                                                             <  2:490576‑M2/251‑80 (MQ=255)
                                                                                  atacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGAGAACGCCATGTGCAAATCAGTAATGGTGTTCCg                                                                                                                                                                        <  2:59352‑M2/93‑1 (MQ=255)
                                                                                          cgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCAc                                                                                                                                                                <  1:153929‑M2/101‑1 (MQ=255)
                                                                                             attgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACttt                                                                                                                                                             <  1:145010‑M2/104‑1 (MQ=255)
                                                                                              ttgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGGAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACttt                                                                                                                                                             >  1:44263‑M2/147‑250 (MQ=255)
                                                                                                  gTTTAACGGATGATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga                                                                                                                                                         >  2:261118‑M2/1‑151 (MQ=255)
                                                                                                       aCGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggt                                                                                                                                                   >  1:531144‑M2/1‑146 (MQ=255)
                                                                                                                 aCAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaac                                                                                                                                         <  2:50511‑M2/251‑116 (MQ=255)
                                                                                                                     gAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc                                                                                                                                      <  1:516423‑M2/250‑119 (MQ=255)
                                                                                                                       aCAGCTTGCACACCAAAATCAACGGTTGCCAGATTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaa                                                                                                                                   >  2:309909‑M2/1‑130 (MQ=255)
                                                                                                                        cagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAg                                                                                                                                  <  1:389622‑M2/131‑1 (MQ=255)
                                                                                                                             cctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAgc                                                                                                                             >  1:546191‑M2/116‑251 (MQ=255)
                                                                                                                              gCACACCACAATCAACGGTTGCCAGAGATGGGCGCGTTATTGAAGCCGATAAACCATTTACTAAGTCAGGCAAATCTGCCGGGGCAGTTTCCGCTATTCATTGTCTATTATCATCGCGAACTGggtgatgctgcccacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctctcagctgtccctcctgttcagctactgacggggtggtgcggaacggcaaaagcaccg                                                                                                                            <  2:212768‑M2/251‑129 (MQ=255)
                                                                                                                                  cacggctgggacggaagtcgctgtagttctcaaaataggtggagctgcctgacaaagtcatcgggcattatctgaacatcaaacactatcaataagttggagtcattaccCGCGAACTGCAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACCCCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGGGCCAgcgatgc                                                                                                                        >  2:356234‑M2/111‑251 (MQ=255)
                                                                                                                                         gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCt                                                                                                                 >  1:510386‑M2/104‑251 (MQ=255)
                                                                                                                                          ggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGAGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTAGTTGAATCAATTGAGCCAGCTATGCGATGCCTg                                                                                                                <  1:425436‑M2/149‑1 (MQ=255)
                                                                                                                                                            ggCGCGTTATTGAAGCAGTTAAACCATTTACTTCGTCAGGCCCATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACGGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcact                                                                                              >  2:306520‑M2/1‑93 (MQ=255)
                                                                                                                                                                   tATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgta                                                                                        <  2:300082‑M2/250‑165 (MQ=255)
                                                                                                                                                                   tATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgta                                                                                        <  1:474970‑M2/250‑165 (MQ=255)
                                                                                                                                                                    atcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGCTGCGATGCCTGGCAATGCCAAATATGGGGAACCggtg                                                                                      >  2:456115‑M2/77‑251 (MQ=255)
                                                                                                                                                                      cggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGTCAATGCCAAATATGGGGAACCtgtggt                                                                                    <  2:510386‑M2/177‑1 (MQ=255)
                                                                                                                                                                            agctgcatgacaaagtcatcgggcattatctgaacataaaacactatcactaagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTg                                                                              >  2:192983‑M2/69‑251 (MQ=255)
                                                                                                                                                                              gTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGACCTGggtgatgctgccaccttactgatttagtgtctgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccatcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaac                                                                            <  2:83420‑M2/251‑177 (MQ=255)
                                                                                                                                                                                  atgacaaagtcatcgggcattatctgaacataaaacactatcactaagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGACTCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTg                                                                        >  1:201309‑M2/63‑251 (MQ=255)
                                                                                                                                                                                      tttACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttc                                                                    <  1:7895‑M2/251‑185 (MQ=255)
                                                                                                                                                                                          cTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcactt                                                                <  1:189503‑M2/251‑189 (MQ=255)
                                                                                                                                                                                                    ccAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttc                                                      >  1:490576‑M2/1‑53 (MQ=255)
                                                                                                                                                                                                       atctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGAATGAGc                                                    <  2:546191‑M2/209‑1 (MQ=255)
                                                                                                                                                                                                       atctgaacataaaacactatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGAATGAGc                                                    <  1:376933‑M2/209‑1 (MQ=255)
                                                                                                                                                                                                           gCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaaccc                                               <  1:283261‑M2/251‑206 (MQ=255)
                                                                                                                                                                                                           gCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacc                                                >  1:558070‑M2/1‑46 (MQ=255)
                                                                                                                                                                                                            ccGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccg                                              <  1:6722‑M2/251‑207 (MQ=255)
                                                                                                                                                                                                              ggggCAGTTTCCTCTATTAGTGTGCTATTATCATCGCGAACTGggggaggctgctaacttactgatgtaggttatgatggggtttttgaggtgctccaggggcttctgtttctatcagccggccctcctgtgcagctactgccggggtgttgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctcgcactgccgtaaaacatgtcaactgcagttcacttacaccgcttctcaacccggt                                            >  2:200622‑M2/1‑43 (MQ=255)
                                                                                                                                                                                                              ggggCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggt                                            <  2:125526‑M2/251‑209 (MQ=255)
                                                                                                                                                                                                               gggCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGATCTGggtgatgctgccaacttactgatttagtgtatgatggtggttttgaggtgctccagtggcttctgtttctatcagttgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcactcacaccgcttctcaacccggta                                           >  1:125526‑M2/1‑42 (MQ=255)
                                                                                                                                                                                                                  cAGTTTCAGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgc                                        <  1:415545‑M2/251‑213 (MQ=255)
                                                                                                                                                                                                                   aGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaccttactgatttcgcgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctccctgccgtaaaacattgcaactgcagttcacttacaccgcttctcaacacggtacgcc                                       <  1:274156‑M2/251‑214 (MQ=255)
                                                                                                                                                                                                                     cactatcaataagttggcgacattaccAGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGACTGAGCAAACGATAACGCggg                                     >  2:507222‑M2/28‑251 (MQ=255)
                                                                                                                                                                                                                      attaccaataagttggagtcattaccCGATAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGGTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCCCGTTAGGGAACGCGTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGTCTATGCCAAATATGGGGAACCGGTGGTGGACTTCGCTTGATGTTGTCCGCAGAATGAGCAAACTATCACGcgggg                                    <  2:183155‑M2/225‑2 (MQ=255)
                                                                                                                                                                                                                        tatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGATCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTAtt                                                                                                                                               >  1:11743‑M2/25‑142 (MQ=255)
                                                                                                                                                                                                                        tatcaataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGATCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTAtt                                                                                                                                               <  2:11743‑M2/118‑1 (MQ=255)
                                                                                                                                                                                                                            tATTAGTTGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctaatgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtcaaacatggcaactgccgttcacttccaccgcttctcaacccggtacgcaccaaaaaat                              <  2:418904‑M2/251‑223 (MQ=255)
                                                                                                                                                                                                                            aataagttggagtcattaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGAATGAGCAAACGATAACGCGGGCTAAAtt                              >  1:256305‑M2/21‑251 (MQ=255)
                                                                                                                                                                                                                                  ttGGCTATTATCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattg                         <  1:249016‑M2/250‑228 (MQ=255)
                                                                                                                                                                                                                                         ttatCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggc                  >  2:7895‑M2/1‑16 (MQ=255)
                                                                                                                                                                                                                                          tatCATCGCGAACTGggtgatgctgccaacttactgctttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacg                                                                                                                                        <  2:530166‑M2/131‑117 (MQ=255)
                                                                                                                                                                                                                                          tatCATCGCGAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacg                                                                                                                                        >  1:530166‑M2/1‑15 (MQ=255)
                                                                                                                                                                                                                                          attaccCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGAATGAGCAAACGATAACGCGGGCTAAATTTGCATTACCTGCt                 >  1:198831‑M2/7‑250 (MQ=255)
                                                                                                                                                                                                                                                cgcgAACTGggtgatgctcccaacttactgctttagtgtatgatggtgcttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatgaatg          <  2:391633‑M2/251‑243 (MQ=255)
                                                                                                                                                                                                                                                cgcgAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGAATGAGCAAACGATAACGCGGGCTAAATTTGCATTACCTGCTAATGTCg          >  1:17290/1‑251 (MQ=255)
                                                                                                                                                                                                                                                   gAACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatgaatggcg       <  1:564248‑M2/251‑246 (MQ=255)
                                                                                                                                                                                                                                                   gAACTGAAAAATCTCATTCGGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGAGGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGAATGAGCAAACGATAACGCGGGCTAAATTTGCATTACCTGCTAATGTCGGCt       <  2:88725/251‑1 (MQ=255)
                                                                                                                                                                                                                                                        gAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGAATGAGCAAACGATAACGCGGGCTAAATTTGCATTACCTGCTAATGTCGGCtggtgg  >  1:40393/1‑251 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                          
ATTGCCGCACTTTCGGAAAACGATCTGGCATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGAATGAGCAAACGATAACGCGGGCTAAATTTGCATTACCTGCTAATGTCGGCTGGTGG  >  NC_000913/1290809‑1291307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.