Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,291,049	IS1 (+) +9 bp	coding (808‑816/1014 nt)	rssB →	regulator of RpoS

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	257908 =	NA (NA)	31 (0.550)	29/492	0.8	93.7%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	1291049 =	2 (0.040)					coding (808/1014 nt)	rssB	regulator of RpoS
*	?	NC_000913	= 258675	NA (NA)	41 (0.730)	38/492	0.5	95.2%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 1291057	2 (0.040)					coding (816/1014 nt)	rssB	regulator of RpoS

CGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258431‑258675 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCAGCAAGTACGCCATTATGTCCAGCTCGGGTGACATCAAGGCAATAAAATGCCAGATCGTTTTCCGAAAGT  <  NC_000913/1291057‑1290817                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTC                                                                                                                                                                                                                                             <  1:564248/251‑1    CATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAGCACCATCATACACTAAAGCAGTAAGTTGGGAGCATCACCCAGTTCGCG                                                                                                                                                                                                                                          <  2:391633/251‑1            GCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAA                                                                                                                                                                                                                                   >  2:7895/1‑250                   CAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAA                                                                                                                                                                                                                            <  1:249016/250‑1                        ATTTTTTGGTGCGTACCGGGTTGAGAAGCGGTGGAAGTGAACGGCAGTTGCCATGTTTGACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCATTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATA                                                                                                                                                                                                                      <  2:418904/251‑1                                 gGCGTACCGTGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCAATGTTTTACGGCAGGGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACGCGAAATCAGTAAGGTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACT                                                                                                                                                                                                             <  1:274156/250‑1                                  GCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCTGAAACTG                                                                                                                                                                                                            <  1:415545/251‑1                                     TACCGGGTTGAGAAGCGGTGTGAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAACTGATAGAAACAGAAGCCACTGGAGCACCTCAAAACCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGATCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCC                                                                                                                                                                                                         >  1:125526/1‑251                                      ACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCC                                                                                                                                                                                                        <  2:125526/251‑1                                      ACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGACATGTTTTACGGCAGTGCGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCAACACCCCGGCAGTAGCTGCACAGGAGGGCCGGCTGATAGAAACAGAAGCCCCTGGAGCACCTCAAAAACCCCATCATAACCTACATCAGTAAGTTAGCAGCCTCCCCCAGTTCGCGATGATAATAGCACACTAATAGAGGAAACTGCCCC                                                                                                                                                                                                        >  2:200622/1‑251                                        CGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGG                                                                                                                                                                                                      <  1:6722/251‑1                                         GGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGC                                                                                                                                                                                                     <  1:283261/251‑1                                          GGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGC                                                                                                                                                                                                     >  1:558070/1‑250                                                GAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGG                                                                                                                                                                                              >  1:490576/1‑251                                                          AAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAG                                                                                                                                                                                    <  1:189503/251‑1                                                              GAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAA                                                                                                                                                                                <  1:7895/251‑1                                                                      GTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGATGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCAGACACTAAATCAGTAAGGTGGCAGCATCACCCAGGTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTAC                                                                                                                                                                        <  2:83420/251‑1                                                                                  TACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATA                                                                                                                                                             <  1:474970/250‑1                                                                                  TACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATA                                                                                                                                                             <  2:300082/250‑1                                                                                        AGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATGGGCCTGACGAAGTAAATGGTTTAACTGCTTCAATAACGCGCC                                                                                                                                                      >  2:306520/1‑251                                                                                                                      CGGTGCTTTTGCCGTTCCGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGAGAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTGGGCAGCATCACCCAGTTCGCGATGATAATAGACAATGAATAGCGGAAACTGCCCCGGCAGATTTGCCTGACTTAGTAAATGGTTTATCGGCTTCAATAACGCGCCCATCTCTGGCAACCGTTGATTGTGGTGTGC                                                                                                                        <  2:212768/251‑1                                                                                                                             TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAAATCTGGCAACCGTTGATTTTGGTGTGCAAGCTGT                                                                                                                 >  2:309909/1‑251                                                                                                                                GCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTC                                                                                                               <  1:516423/250‑1                                                                                                                                  CGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATA                                                                                                                                                                                                                                    >  1:530166/1‑131                                                                                                                                  CGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAAGCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATA                                                                                                                                                                                                                                    <  2:530166/131‑1                                                                                                                                   GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGT                                                                                                           <  2:50511/251‑1                                                                                                                                             ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGT                                                                                                 >  1:531144/1‑251                                                                                                                                                   TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATCATCCGTTAAAC                                                                                            >  2:261118/1‑250                                                                                                                                                                       acaaCTGATAGAAACAGAAGCCACCGGAGCACCCCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCA                                                                       <  2:490576/247‑1                                                                                                                                                                       ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCATGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCA                                                                       <  1:100594/251‑1                                                                                                                                                                                      AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAACCTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCAGCAAGTACGCCATT                                                         >  1:43349/1‑250                                                                                                                                                                                              CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCAGCAAGTAAGCCATTATGTCAAGC                                                >  2:139049/1‑251                                                                                                                                                                                                  AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCAGCAAGTACGCCATTATGTCCAGCTCGG                                            >  1:346162/1‑251                                                                                                                                                                                                            AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCACCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTATGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCAGCAAGTACGCCATTATGTCCAGCTAGGGTGACATCA                                   >  1:354636/1‑250                                                                                                                                                                                                            AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACACAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCAGCAAGAACGCCATTATGTCCAGCTCGGGTGACATCA                                   >  2:479496/1‑250                                                                                                                                                                                                                     CATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTGCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCAGCAAGTACGCCAGTATGTCCAGCTCGGGTGACATCAAGGCAATAAA                         <  2:506781/251‑1                                                                                                                                                                                                                             AAATCAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACGAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCAGCAAGTACGCCATTATGTCCAGCTCGGGTGACATCAAGGCAATAAAATGCCAG                  <  1:261118/250‑1                                                                                                                                                                                                                                 CAGTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCGGGCAACCGTTGATTTTGGTGTGCAAGCTGTGCCTGTAATAATCCGTTAAACAATGCGCGGAATAACAAGGCAGCAAGTACGCCAGTATGTCCAGCTCGGGTGACATCAAGGCAATAAAATGCCAGATCGT             <  1:231519/251‑1                                                                                                                                                                                                                                   GTAAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCAGCAAGTACGCCATTATGTCCAGCTCGGGTGACATCAAGGCAATAAAATGCCAGATCGTTT           <  1:416973/251‑1                                                                                                                                                                                                                                     AAGTTGGCAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCTGCAGATTGGCCTGACGAAGTAAATGTTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATGTTGGTGTGCAAGCTGTTCCTGTAAGAAGCCGTCAAGCAATGCGGCTAATAACAAGGCAGCAAGTACGCCATTATGTCCAGCTCGGGTGACATCAAGGCAATTAAATGCCAGATCGTTTTC         <  1:216661/251‑1                                                                                                                                                                                                                                            CAGCATCACCCAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCAGCAAGTACGCCATTATGTCCAGCTCGGGTGACATCAAGGCAATAAAATGCCAGATCGTTTTCCGAAAGg  >  2:134772/1‑250                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/258431‑258675 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGTTCGCGATGATAATAGCCAACTAATAGCGGAAACTGCCCCGGCAGATTGGCCTGACGAAGTAAATGGTTTACCTGCTTCAATAACGCGCCCAACTCTGGCAACCGTTGATTTTGGTGTGCAAGCTGTTCCTGTAATAATCCGTTAAACAATGCGCGTAATAACAAGGCAGCAAGTACGCCATTATGTCCAGCTCGGGTGACATCAAGGCAATAAAATGCCAGATCGTTTTCCGAAAGT  <  NC_000913/1291057‑1290817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.