| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 28 (0.690) | 28/496 | 0.4 | 93.3% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 4215399 | 2 (0.050) | intergenic (+190/‑79) | metA/aceB | homoserine O‑succinyltransferase/malate synthase A | |||||
GGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289164‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCTGAGGTACGTTTCGGAAATAAAAAAGGCACCCGAAGGTGCCTGAGGTAAGGTGCTGAATCGCTTAACGATCGACTATCACAGAAGATTAATCCAGCGTTGGATTCATGTGCCGTAGATCGTAT < NC_000913/4215399‑4215173 GGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATATCGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGATAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAG < 1:429025/251‑1 GTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACT < 1:285680/251‑1 GCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACT < 1:237169/251‑1 CGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAA < 1:447297/251‑1 AACCAACTGGCGATGTTATTCACGCTGGACAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGC < 1:223644/250‑1 gcctatgcTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGTAGAGATCTCACTAAAAACTGGGTATTACGCCTTAAATTGCGAAGAAACGGTCTAAATAGGTTGATGCAAGGCATTTACGGGAGAAAAATTCGGCTCAAACATGAAGAAATGAAATGACTGATTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCAGTTCAAATGCAAAATCAAA < 2:99527/243‑1 GGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAA > 1:219392/1‑250 GATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAAC < 1:250440/251‑1 TGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGACACGTCAGTGGGCGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGTACCGGTCTAAATAGGATGATTCAAGGCATTTACGGGAGAAAAAATCAGCTCAAACATGCAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAACACA > 1:298630/1‑250 TATTCACGCTGGCCAACATGTTTAGGGCGGACCACATGATACGTCAGTGGGAGAGATCTAACTAAAAACTGGGGATCACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATAGGCACAAACATGAAGAACTGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTACCTCAGACTACTCCTTTAACATGCAAAATCAAAAACAATTT > 2:23693/1‑251 CACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCA < 1:429210/250‑1 GCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAACAACTGGGGATAACGCCTTACATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGCAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCCTTTT > 2:352875/1‑251 GCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATT < 1:115972/251‑1 CGGGCGGACCAAATGATACGGCAGTGGGAGAGATCTCACTAAAAACTGGGGATATCGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGTCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGTAATGAAATGACTGAGTCAGCTGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAATACTACTCATTTAAAATGCAAAATCATAAACAATTTCCATTTTAATTAAAAATACTTG < 1:286715/250‑1 AATGATACGTCAGTGAGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAAAATGAAGAAATGAAATGACTGAGTCAGCCGCGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTG > 1:84824/1‑250 ATACGTCAGTGGGAGAGAGCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCTGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAAGGCAAAATCAAAAACAAGTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAAC < 1:137238/251‑1 CTAAAAACTGGGGATACCGCCTTAAATGGCGCAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAACATAGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATAAAAAACAATTTCCATTTTAATTAACAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACC > 2:316800/1‑251 AAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATATGCTGATTCAAGGCATTTACGTGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAATAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATCCTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCT < 2:316672/251‑1 GGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCTGAGGTA < 1:232959/251‑1 AAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCTGAGGTACGTTTCGGAAATAAAAAAGGCACC < 1:165559/251‑1 AAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCTGAGGTACGTTTCGGAAATAAAAAAGGCACCCGAAGGT < 1:146271/249‑1 CAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCTGAGGTACGTTTCGGAAATAAAAAAGGCACCCGAAGGTGCCTGAGGTAAGGTG < 1:159561/251‑1 GCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCTGAGGTACGTTTCGGAAATAAAAAAGGCACCCGAAGGTGCCTGAGGTAAGGTGCTG > 2:154135/1‑250 ACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCTGAGGTACGTTTCGGAAATAAAAAAGGCACCCGAAGGTGCCTGAGGTAAGGTGCTGAATCGCT > 1:304575/1‑251 AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCTGAGGTACGTTTCGGAAATAAAAAAGGCACCCGAAGGTGCCTGAGGTAAGGTGCTGAATCGCTTAACGATCGACTATCACAGAA < 2:219392/251‑1 GTCAGCCGAGAAAAAATGCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCAGTTTAATTAAAAATACTTGATAACTTGTTGATAACAAGATGAATAAAATTTATTCACCTGCTGAGGTACTTTTCGGAAATAAAAAAGGCACCCGAAGTTGCCTGAGGTAAGGTGCTGAATCGCTTTACGATCGACTATCACAGAAGATTAATCCAGCGTTGGATTCATG < 2:32319/251‑1 AATTTCCCCGCTTATTCGCACCTTCCCTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCTGAGGTACGTTTCGGAAATAAAAAAGGCACCCGAAGGTGCCTGAGGTAAGGTGCTGAATCGCTTAACGATCGACTATCACAGAAGATTAATCCAGCGTTGGATTCATGTGCCGTAGATCGT > 1:330876/1‑251 TTCCCCGCTTATTCGCCCCTTCCCTAAGACTACTCAATTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCTGAGGTACGTTTCGGAAATAAAAAATGCACCCGAAGGGGCTTGAGGTAAGGTGCTGAATCGCTTAACGATCGACTATCACAGAAGATTAATCCAGCGTGGGATTCATTTGCCGTAGATCGTAT < 2:451827/250‑1 GGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAAAAACTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289164‑2288919‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAAGACTACTCATTTAAAATGCAAAATCAAAAACAATTTCCATTTTAATTAAAAATACTTGATAACTTGTTGATAACAATATGAATAAAATTTATTCACCTGCTGAGGTACGTTTCGGAAATAAAAAAGGCACCCGAAGGTGCCTGAGGTAAGGTGCTGAATCGCTTAACGATCGACTATCACAGAAGATTAATCCAGCGTTGGATTCATGTGCCGTAGATCGTAT < NC_000913/4215399‑4215173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |