Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	2,942,775	(GTTGTGTT)2→1	noncoding (80‑87/206 nt)	gcvB →	small regulatory RNA GcvB

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2942775	2942782	8	30 [1]	[0] 29	gcvB	small regulatory RNA GcvB

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2942774	1 (0.030)	29 (0.880)	27/468	0.3	98.4%	noncoding (79/206 nt)	gcvB	small regulatory RNA GcvB
	?	NC_000913	2942783 =	0 (0.000)					noncoding (88/206 nt)	gcvB	small regulatory RNA GcvB

AAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTA  >  NC_000913/2942526‑2943014                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                 aaaaaCTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTATATCACACTATGTAACCTATTAGGTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTTGCGGCACTTCCTGAGCCGTAACGAAAAGGTTTATCGGAATGCTGGTTGGGGTGAACTTTGGGCTGACTGTTGTGATTTTATGTTtg                                                                                                                                                                                                                                                <  2:149342‑M1/251‑3 (MQ=255)        cGTAAGGCATGTATCGGTGGTAAGCTTTTAGACATTGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAGATCACTCTGTGTAACCTATTAGTTTTTTTCATCTGAGCCATTATCAATATTCCGTTGAGCTTCTCACAGCAATTACCTATAGTTGCGGCACTTCCTGAGCCGTAACTAAAAGTTTTATCGGAATGCTTGTTCTGGTGAGCTTTTGGCTTACGGTTGTGAtgttttgttggcaattg                                                                                                                                                                                                                                          <  2:153660/250‑8 (MQ=255)                              aTCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAGATCACGCTGTGTAACCTATTAGGTTTTTTAATCTGAGCCATAGTGAATTGGCCGTTGAGCTTCTAGCAGCAAATACCTATAGTGGCGGCACTTCGTGTGCCGGAATGAAAAGTGTTATCGGAATGTGTGTGCTGGTGAACTTTTGGCTTACTGTTGTGATTTTGGGTTtgcaattggtctgcgagtcagaccatggtag                                                                                                                                                                                                                   <  1:106918‑M1/251‑32 (MQ=255)                                            gCTATTAAACTTTGATGTTAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctacctttt                                                                                                                                                                                                     >  1:332553‑M1/1‑206 (MQ=255)                                                 tAAACTTTGATGTTAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATTTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttca                                                                                                                                                                                                 <  1:288246‑M1/250‑50 (MQ=255)                                                    aCTTTGATGTTAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGCACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTAAGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttc                                                                                                                                                                                             >  2:310190‑M1/1‑198 (MQ=255)                                                                    aaTTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAAGCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctg                                                                                                                                                                             <  1:175226‑M1/251‑70 (MQ=255)                                                                    aaTTTAACAATTAGATCACACTATGTAACCTATTAGATTTTTTAATCTGAGCAATTATAAATTGTCCGTTGCGCTTCTACCAGCACATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccattgtagcaaaactacctttttttacttcctgtacatttaccctg                                                                                                                                                                             >  2:298035‑M1/1‑182 (MQ=255)                                                                        tAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtct                                                                                                                                                                          <  2:71260‑M1/250‑73 (MQ=255)                                                                                                 cTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgc                                                                                                                                                >  2:322741‑M1/1‑153 (MQ=255)                                                                                                   aTTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcc                                                                                                                                               <  1:166963‑M1/250‑100 (MQ=255)                                                                                                              tAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgc                                                                                                                                   >  1:293488‑M1/1‑140 (MQ=255)                                                                                                               aaTCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgct                                                                                                                                  <  2:101286‑M1/251‑113 (MQ=255)                                                                                                                           tataAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttacctt                                                                                                                      >  1:276149‑M1/1‑127 (MQ=255)                                                                                                                                      cGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaa                                                                                                           <  1:310190‑M1/251‑136 (MQ=255)                                                                                                                                         tGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattcatgtagcaccgcctaattgcggtgcttttttttaccttgtgatcgcgaatt                                                                                                         >  1:105315‑M1/1‑113 (MQ=255)                                                                                                                                                cTACCAGCAAATACCTATAGTGGCGGCACTTCCAGAACCGAAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattagtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgactaattgcggtgcttttttttaccttgcgatcgcgaattactgatcc                                                                                                 >  1:128487‑M1/1‑106 (MQ=255)                                                                                                                                                             ccTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagttcgaccatct                                                                                    <  1:356037‑M1/251‑159 (MQ=255)                                                                                                                                                                         gcACTTCCTGAGCCGGAACGAAAAGTTTTATAGGAATGCGTGTTCTGGTGAATTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtatgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagttcgaccatctctttcacgtc                                                                          >  1:352479‑M1/1‑81 (MQ=255)                                                                                                                                                                          cACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGCTGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagttcgaccatctctttcacgtcagt                                                                       >  2:39280‑M1/1‑80 (MQ=255)                                                                                                                                                                           aCTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATTCTTGTTCTGGTGCACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtcttcgattcagaccatggcagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattactgtagcaccgcctaattgcggtgcttttttttaacttgcgatcgcgaattactgatccagttcgaacatctctttcacgtcagt                                                                       >  1:183786‑M1/1‑79 (MQ=255)                                                                                                                                                                           aCTTCCTGAGCCGGAACGAAAAGGTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagttcgaccatctctttcacgtcagt                                                                       >  2:310812‑M1/1‑79 (MQ=255)                                                                                                                                                                               ccTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagtgcgaccatctctttcacggcagtacgg                                                                   <  2:140080‑M1/250‑176 (MQ=255)                                                                                                                                                                               ccTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattgggctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagttattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagttcgaccatctctttcacgtcagtacgg                                                                   <  2:206067‑M1/250‑176 (MQ=255)                                                                                                                                                                                                    ttATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagttcgaccatctctttcacgtcagtacggttgatctgctgtttgttgccat                                             >  1:122174‑M1/1‑54 (MQ=255)                                                                                                                                                                                                        cGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagttcgaccatctctttcacgtcagtacggttgatctgctgtttgttgccattagc                                         >  1:219846‑M1/1‑50 (MQ=255)                                                                                                                                                                                                              gCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagttcgaccatctctttcacgtcagtacggttgatctgctgtttgttgccattagcgtctt                                    <  1:136735‑M1/250‑207 (MQ=255)                                                                                                                                                                                                                 tgtTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagttcgaccatctctttcacgtcagtacggttgatctgctgtttgttgccattagcgtctttat                                 >  2:57136‑M1/1‑41 (MQ=255)                                                                                                                                                                                                                       ggTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagttcgaccatctctttcacgtcagtacggttgatctgctgtttgttgccattagcgtctttatacgaaat                          >  1:280135‑M1/1‑35 (MQ=255)                                                                                                                                                                                                                                               gATGTTGTGTTtgcaattggtctgcgattcagaccatggtagcaaagctaccttttttcacttcctgtacatttaccctgtctgtccatagtgattaatgtagcaccgcctaattgcggtgcttttttttaccttgcgatcgcgaattactgatccagttcgaccatctctttcacgtcagtacggttgatctgctgtttgttgccattagcgtctttatacgaaatcataccggtatcgttatcagtctg  <  1:310812‑M1/251‑241 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                 AAAAACTCGTAAGGCATTTAGCGGTGGTAATCGTTTAGACATGGCTATTAAACTTTGATGTTAAATGAATTTAACAATTAGATCACACTATGTAACCTATTAGTTTTTTTAATCTGAGCCATTATAAATTGTCCGTTGAGCTTCTACCAGCAAATACCTATAGTGGCGGCACTTCCTGAGCCGGAACGAAAAGTTTTATCGGAATGCGTGTTCTGGTGAACTTTTGGCTTACGGTTGTGATGTTGTGTTGTTGTGTTTGCAATTGGTCTGCGATTCAGACCATGGTAGCAAAGCTACCTTTTTTCACTTCCTGTACATTTACCCTGTCTGTCCATAGTGATTAATGTAGCACCGCCTAATTGCGGTGCTTTTTTTTACCTTGCGATCGCGAATTACTGATCCAGTTCGACCATCTCTTTCACGTCAGTACGGTTGATCTGCTGTTTGTTGCCATTAGCGTCTTTATACGAAATCATACCGGTATCGTTA  >  NC_000913/2942526‑2943014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑