| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,583,432 | Δ3,267 bp | coding (64‑3330/3513 nt) | hsdR ← | type I restriction enzyme EcoKI endonuclease subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4583432 | 4586698 | 3267 | 5 [0] | [0] 5 | hsdR | type I restriction enzyme EcoKI endonuclease subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4583431 | 0 (0.000) | 5 (0.680) | 4/326 | 0.3 | 100% | coding (3331/3513 nt) | hsdR | type I restriction enzyme EcoKI endonuclease subunit |
| ? | NC_000913 | 4586699 = | 0 (0.000) | coding (63/3513 nt) | hsdR | type I restriction enzyme EcoKI endonuclease subunit | |||||
AGCCTGAAGGATGAAGTGTATACGTGTCAGGCCAGCTCGTCCCAGATATAATCGCTGAATTTGCCCAGCAGGGTATCGAGATTATCGTCAAAGGTTCTTTGCAGCATCGCCTTCCCGCCGCGACGGTGGAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAATTGCTCGCTGCTCCAGTCGTTTTCGCCCTTAATGCGCGTCAGCGCGTGATCGACACGTTCCTCAAACGGTTTCAGCGCATCGCCCACCGCAGCGCGGCGAATATGACCAATCAGCCGGGCGGCGATATCTTCATTGCGCGTCTCTTTCCATGCTTTGCGCAGGGAAGATTCCTCAAAGTGCTGG > NC_000913/4583223‑4583615 | aGCCGGAAGGAGGAAGTGTATAGGTGTCAGGCCAGCTCGTCCCAGATAGAATCGCTGAATTTGCCCAGCAGGGTTTCGAGATTATCGTCAAAGGTTCTTTGCAGCATCGCCTTCCCGCCGCGGCGGTGGAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTGTCTCTGTCAGCGCCTGCGCTAAACGATCGAGGCAGCTTAAggcgatggcataagtgaagtcgttgacgcccttcaggaattc < 1:76095‑M1/251‑43 (MQ=255) gtCAGGCCAGCTCGTCCCAGATATAATCGCTGAATTTGCCCAGCAGGGAATAGAGATTATAGTCCATGGTTATTTGCAGCCTCGCCTTCCCGCCGCGACGGTGGAAGTTGCCGGTTTTGTAGAGATCGTCGTCGCGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgatggcataagtgaagtcgttgacgcccttcaggaattcaaaattggatttattcatccttgtt > 1:110537‑M1/1‑184 (MQ=255) ggAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgatggcataagtgaagtcgttgacgcccttcaggaattcaaaattggatttattcatcattgttattaatccattgctgtgcgggcctgtccaaatatttaagn < 1:94867‑M1/189‑108 (MQ=255) ggAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgatggcataagtgaagtcgttgacgcccttcaggaattcaaaattgganttannnnncann > 2:94867‑M1/1‑82 (MQ=255) gAAGACATCGTCGTCGAGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAAggcgatggcataagtgaagtcgttgacgcccttcaggaattcaaaattggatttattcatcattgttattaatccatttctttgctggcctgtccaaatatttaaggcccataacatctcatcttagctttctgtacctttccggtcaatgaccacggtcacagcaactgactcatttctaacg < 1:152410‑M1/250‑185 (MQ=255) | AGCCTGAAGGATGAAGTGTATACGTGTCAGGCCAGCTCGTCCCAGATATAATCGCTGAATTTGCCCAGCAGGGTATCGAGATTATCGTCAAAGGTTCTTTGCAGCATCGCCTTCCCGCCGCGACGGTGGAAGTTGCCGGTTTTGAAGACATCGTCGTCGAGCACCACTTTCTCTTTCAGCGCCTGCGCTAAACGATCGAGCCAGCTTAATTGCTCGCTGCTCCAGTCGTTTTCGCCCTTAATGCGCGTCAGCGCGTGATCGACACGTTCCTCAAACGGTTTCAGCGCATCGCCCACCGCAGCGCGGCGAATATGACCAATCAGCCGGGCGGCGATATCTTCATTGCGCGTCTCTTTCCATGCTTTGCGCAGGGAAGATTCCTCAAAGTGCTGG > NC_000913/4583223‑4583615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |