| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,583,432 | Δ3,267 bp | coding (64‑3330/3513 nt) | hsdR ← | type I restriction enzyme EcoKI endonuclease subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4583432 | 4586698 | 3267 | 5 [0] | [0] 5 | hsdR | type I restriction enzyme EcoKI endonuclease subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4583431 | 0 (0.000) | 5 (0.680) | 4/326 | 0.3 | 100% | coding (3331/3513 nt) | hsdR | type I restriction enzyme EcoKI endonuclease subunit |
| ? | NC_000913 | 4586699 = | 0 (0.000) | coding (63/3513 nt) | hsdR | type I restriction enzyme EcoKI endonuclease subunit | |||||
TTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACAAGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACG > NC_000913/4586490‑4586882 | agccggaaggaggaagtgtataggtgtcaggccagctcgtcccagatagaatcgctgaatttgcccagcagggtttcgagattatcgtcaaaggttctttgcagcatcgccttcccgccgcggcggtggaagttgccggttttgaagacatcgtcgtcgagcaccactgtctctgtcagcgcctgcgctaaacgatcgaggcagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTc < 1:76095‑M2/42‑1 (MQ=255) gtcaggccagctcgtcccagatataatcgctgaatttgcccagcagggaatagagattatagtccatggttatttgcagcctcgccttcccgccgcgacggtggaagttgccggttttgtagagatcgtcgtcgcgcaccactttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCCTTGtt > 1:110537‑M2/185‑251 (MQ=255) ggaagttgccggttttgaagacatcgtcgtcgagcaccactttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAagn < 1:94867‑M2/107‑2 (MQ=255) ggaagttgccggttttgaagacatcgtcgtcgagcaccactttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGANTTannnnncann > 2:94867‑M2/83‑144 (MQ=255) gaagacatcgtcgtcgagcaccactttctctttcagcgcctgcgctaaacgatcgagccagcttaaGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTTCTTTGCTGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGTCAATGACCACGGTCACAGCAACTGACTCATTTCTAACg < 1:152410‑M2/184‑1 (MQ=255) | TTACCAATGCGGCGTAATTTGTGAAATACAGAGAGGATGTTGTCATCAACAAAGGCGATTTTGCCGAGTTCACGCAGGAGATCGTGTTGATTCTCACAAGGGGGGATGTTGAGTAACAGACCAAGATGTTTCGCTGTGGCTTCGCCAAACATACGCATTTTAATCAGCGTCGTGTTGGGATCATCCGGGTAGTTATTTTCCGCCGCACAGGCGATGGCATAAGTGAAGTCGTTGACGCCCTTCAGGAATTCAAAATTGGATTTATTCATCATTGTTATTAATCCATTGCTGTGCGGGCCTGTCCAAATATTTAAGGCCCATAACATCTCATCTTAGCTTTCTGTACCTTTCCGGGCAATGACCACGGTCACAGCAACTGACTCATTTCTAACG > NC_000913/4586490‑4586882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |