| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,995,620 | IS5 (–) +4 bp | intergenic (‑261/‑32) | uvrY ← / → yecU | DNA‑binding transcriptional activator UvrY/protein YecU |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1995620 = | 0 (0.000) | 5 (0.500) | 4/318 | 0.6 | 100% | intergenic (‑261/‑35) | uvrY/yecU | DNA‑binding transcriptional activator UvrY/protein YecU |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1995623 | 0 (0.000) | 8 (0.830) | 5/308 | 0.4 | 100% | intergenic (‑264/‑32) | uvrY/yecU | DNA‑binding transcriptional activator UvrY/protein YecU |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
AATAGGGATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCAAGAACTGGCAAA > NC_000913/1995375‑1995867 | aaTAGGGATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAgg < 1:32740‑M1/251‑3 (MQ=255) cTTTGAAACGTTAAAAATGGTGGGTATTCGAGTTTTCTCTCGTTTTTGTCAATTCGATTGACAACAGTTATGGTCACGACCGTAACCAACAGCTTACCGGCTCGTTTCACAGTAAGCCCTACGATGCAATGCGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcgggaaaattcttctaggctgcatcagtaatttcatttcttc > 1:163069‑M1/1‑192 (MQ=255) aatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGc > 1:52066‑M1/138‑251 (MQ=255) gacggcgcttactgctgcattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcctatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCAATGCCGATATCACGCTCAAAAAACAACAACTGCTATTTTTTGCAAAGCtt < 1:48764‑M1/131‑1 (MQ=255) aCCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTTCGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAACTCAGCCCGCTGCATATGACACATTACggatggtgcgaataagcggggaatttcttctcggctgactcagtcatttcatttcttaatgtttgagcagattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc > 1:75883‑M1/1‑108 (MQ=255) aaTGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcagttggtccgcc < 1:159701‑M1/251‑187 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCAc < 1:39489‑M1/163‑1 (MQ=255) ttATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagn < 1:57161‑M1/250‑205 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTg < 1:13990‑M1/211‑1 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttacTTAATTAACCAGAACAATGCGGGCAAAAAACATTCATGATAACACTATTTATTGGTCATTATATTAACGTATTTTATAGAACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTg < 1:172572‑M1/211‑1 (MQ=255) aGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcgtttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggtn < 1:21349‑M1/251‑228 (MQ=255) cccGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatn < 1:59049‑M1/196‑175 (MQ=255) aCATTAAggaaggtgcgaataagcggggaaattcgtctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccggaaatgccttgaatcagcctatttataccggttcgtcgccatttaatgcgttatccccagttttgagtgagatctctcccactgacgtatcatttgggccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttcagcaacc < 1:32628‑M1/251‑245 (MQ=255) | AATAGGGATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCAAGAACTGGCAAA > NC_000913/1995375‑1995867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |