| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,639,657 | (TCCGGCGTA)2→1 | coding (642‑650/717 nt) | arcA ← | DNA‑binding transcriptional dual regulator ArcA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4639656 | 1 (0.090) | 11 (1.000) | 10/286 | 0.1 | 91.9% | coding (651/717 nt) | arcA | DNA‑binding transcriptional dual regulator ArcA |
| ? | NC_000913 | 4639666 = | 1 (0.090) | coding (641/717 nt) | arcA | DNA‑binding transcriptional dual regulator ArcA | |||||
ATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGT > NC_000913/4639429‑4639873 | gccggcatgatgtttgtgacccgtaatatcgactggtatgcgttttcactgccgaaaatgaaagccagtaaagaagttacaacggacgatgagttacgtatctggaaataaggttgaaaaataaaaacggcgctaaaaagcgccgttttttttgacggtggtaaagccgattaatcttccagatcaccgcagaagcgataaccttcaccgtgaatggtggcgatgatttccggcgtaGATTCGAAATGttt > 1:65733‑M2/238‑251 (MQ=255) cgaaaatgaaagccagtaaagaagttacaacggacgatgagttacgtatctggaaataaggttgaaaaataaaaacggcgctaaaaagcgccgttttttttaacggtggtaaagccgattaatcttccagatcaccgcagaagcgataaccttcaccgtgaatggtggcgatgatttccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTc < 1:273378‑M2/65‑1 (MQ=255) gaaaatgaaagccagtaaagaagttacaacggacgatgagttacgtatctggacataaggttgaaaaataaaaacggcgctaaaaagcgccgttttttttgacggtggtaaagccgattaatcttccagatcaccgcagaagcgataaccttcaccgtgaatggtggcgatgatttccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCAc > 1:123664‑M2/185‑251 (MQ=255) acgatgagttacgtatctggaaataaggttgaaaaataaaaacggcgctaaacagcgccgttttttttgacggtggtaaagccgattaatcttcccgatcaccgcagaagcgataaccttcaccgtgaatggaggcgatgatttccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGCTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACgg > 1:37235‑M2/153‑251 (MQ=255) aataaaaacggcgctcaccagcgccgttttttttgacggtggtaaagccgattcatcttcaagatcaacgcagaagcgataaccttcaccgtgaatggtggcgatgatttccggcgtcGATTAGAAATGTTTACGAATACGGCGGATCGTCACGTCGCCAGAACGGTCGTGCGGTTTCAGCTCACGGCCGCTCcttttcttcggc > 1:161414‑M2/119‑202 (MQ=255) gctaaaanncgccgttttntttgacggtggtaaagccgattaatcttccagatcaccgcagaagcgataaccntcaccgtgannggnggcgangnnntnnngcntaGATTCGAAATGTTTACGNATNNGGCGGANCGTCACGTCTACAGTACGGTCGTGCg < 2:59772‑M2/55‑1 (MQ=255) gctaaaaagcgccgttttttttgacggtggtaaagccgattaatcttccagatcaccgcagaagcgataaccttcaccgtgaatggtggcgatgatttccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTCCAGTACGGTCGTGCg > 1:59772‑M2/107‑161 (MQ=255) ttttgacggtggtaaagccgattaatcttccagatcaccgcagaagcgataaccttcaccgtgaatggtggcgatgatttccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCagn < 1:53723‑M2/162‑2 (MQ=255) tttgacggtggtaaagccgattaatcttccagatcaccgcagaagcgagaaccttcaccgtgaatggtggcgatgatttccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCgg < 1:228450‑M2/73‑1 (MQ=255) ggtaaagccgattaatcttccagatcaccgcagaagcgataaccttcaccgtgaatggtggcgatgatttccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTc > 1:84877‑M2/79‑251 (MQ=255) gCGATAACCTTCACCGTGAATGGTGGCGAGGATT‑‑‑‑‑‑‑‑‑TCCGGCGTAGATTCGAAATGGTTAGGAATATGGCGGGTCGCCACGTCTACAATAAGGTAGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGGTAAGCACGGGACTGAATTTTGCCTGGGTTTTCCCAGAAGTGCAGCATGGGGCGGAACTCGCGGAGCGGCGGCATGTACTGCTCGCCATCAGGGCCGATCAAAGAACGGCTGTTGATGt > 1:252692/1‑251 (MQ=255) tgatttccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTGCAGCACGGGACTGAATTTTGCCTGGGt < 1:218009‑M2/118‑1 (MQ=255) | ATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGT > NC_000913/4639429‑4639873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |