| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,639,657 | (TCCGGCGTA)2→1 | coding (642‑650/717 nt) | arcA ← | DNA‑binding transcriptional dual regulator ArcA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4639656 | 1 (0.090) | 11 (1.000) | 10/286 | 0.1 | 91.9% | coding (651/717 nt) | arcA | DNA‑binding transcriptional dual regulator ArcA |
| ? | NC_000913 | 4639666 = | 1 (0.090) | coding (641/717 nt) | arcA | DNA‑binding transcriptional dual regulator ArcA | |||||
GCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGT > NC_000913/4639420‑4639873 | gCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTAgattcgaaatgttt > 1:65733‑M1/1‑237 (MQ=255) cGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTAACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTAgattcgaaatgtttacgaatacggcggatcgtcacgtctacagtacggtcgtgcggtttcagctc < 1:273378‑M1/250‑66 (MQ=255) gAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGACATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTAgattcgaaatgtttacgaatacggcggatcgtcacgtctacagtacggtcgtgcggtttcagctcac > 1:123664‑M1/1‑184 (MQ=255) aCGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAACAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCCGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGAGGCGATGATTTCCGGCGTAgattcgaaatgtttacgaatacggcggatcgtcacgtctacagtacggtcgtgcggcttcagctcacggccggtcattttcttcagcagttcagcacgg > 1:37235‑M1/1‑152 (MQ=255) aaTAAAAACGGCGCTCACCAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTCATCTTCAAGATCAACGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTCgattagaaatgtttacgaatacggcggatcgtcacgtcgccagaacggtcgtgcggtttcagctcacggccgctccttttcttcggc > 1:161414‑M1/1‑118 (MQ=255) gcTAAAANNCGCCGTTTTNTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCNTCACCGTGANNGGNGGCGANGNNNTNNNGCNTAgattcgaaatgtttacgnatnnggcggancgtcacgtctacagtacggtcgtgcg < 2:59772‑M1/161‑56 (MQ=255) gcTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTAgattcgaaatgtttacgaatacggcggatcgtcacgtctccagtacggtcgtgcg > 1:59772‑M1/1‑106 (MQ=255) ttttGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTAgattcgaaatgtttacgaatacggcggatcgtcacgtctacagtacggtcgtgcggtttcagctcacggccggtcattttcttcagcagttcagcacgggactgaattttgcctgggttttcacagaagtgaagcatggcgcggaactcgctgcgcggcagn < 1:53723‑M1/250‑163 (MQ=255) tttGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGAGAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTAgattcgaaatgtttacgaatacggcggatcgtcacgtctacagtacggtcgtgcggtttcagctcacggccgg < 1:228450‑M1/160‑74 (MQ=255) ggtAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTAgattcgaaatgtttacgaatacggcggatcgtcacgtctacagtacggtcgtgcggtttcagctcacggccggtcattttcttcagcagttcagcacgggactgaattttgcctgggttttcacagaagtgaagcatggcgcggaactcgctgcgcggcagcttgtactgctc > 1:84877‑M1/1‑78 (MQ=255) gCGATAACCTTCACCGTGAATGGTGGCGAGGATT‑‑‑‑‑‑‑‑‑TCCGGCGTAGATTCGAAATGGTTAGGAATATGGCGGGTCGCCACGTCTACAATAAGGTAGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGGTAAGCACGGGACTGAATTTTGCCTGGGTTTTCCCAGAAGTGCAGCATGGGGCGGAACTCGCGGAGCGGCGGCATGTACTGCTCGCCATCAGGGCCGATCAAAGAACGGCTGTTGATGt > 1:252692/1‑251 (MQ=255) tgatTTCCGGCGTAgattcgaaatgtttacgaatacggcggatcgtcacgtctacagtacggtcgtgcggtttcagctcacggccggtcattttcttcagcagtgcagcacgggactgaattttgcctgggt < 1:218009‑M1/132‑119 (MQ=255) | GCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGT > NC_000913/4639420‑4639873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |