| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,931,171 | IS4 (–) +12 bp | intergenic (‑78/‑134) | ravA ← / → kup | regulatory ATPase RavA/K(+):H(+) symporter Kup |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3931171 = | 0 (0.000) | 19 (1.080) | 15/292 | 0.1 | 100% | intergenic (‑78/‑145) | ravA/kup | regulatory ATPase RavA/K(+):H(+) symporter Kup |
| ? | NC_000913 | = 4503515 | NA (NA) | noncoding (1/1426 nt) | IS4 | repeat region | |||||
| * | ? | NC_000913 | = 3931182 | 0 (0.000) | 24 (1.380) | 17/290 | 0.1 | 100% | intergenic (‑89/‑134) | ravA/kup | regulatory ATPase RavA/K(+):H(+) symporter Kup |
| ? | NC_000913 | 4502090 = | NA (NA) | noncoding (1426/1426 nt) | IS4 | repeat region | |||||
CAATACCTGGCGGGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGCACACATTTCATATTTCAACGAAAGACTAGTCTATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATA > NC_000913/3930943‑3931385 | cAATACCTGGCGGGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACCCAACCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAAATGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtc > 1:246313‑M1/1‑240 (MQ=255) cgcttgcgaagcgttacagtacctgattcggcaaggcaacgagagatgagtgcgggttcgaggtaagcccccagagaagtcagtgtgttacgtagagaaacgtaacgggataccagatcaagagcgtgtccaatgtgcataaaaaaatccggagacaagtgagcatttccggagtcttgcacagccactatatcgggcaactgagccttagcttatcggcattaCTCAAAGGGGGGGTATTTTTCTTTGAg > 1:219718‑M1/225‑251 (MQ=255) ntgGCGGGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGGCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagtta > 1:275699‑M1/2‑234 (MQ=255) ttCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactggctctttttcgn < 1:269064‑M1/249‑41 (MQ=255) ggcaaggcaacgagagatgagttcggggtcgaggtaatcccccagagatgtcagtgggttacgcagagactcgtaacgggatacgagatcaagagcatgtcaaatgtgcataaaaaaatccggaaacaagtgagagtttccggattcttacacagccactggatcggtcaactgatcattaactgatcggcattaCTCAACGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAg < 1:200376‑M1/51‑1 (MQ=255) aataaACACAAGCGGATGTCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactggctctttttcggggctgtgggggatttccan < 1:117744‑M1/249‑60 (MQ=255) gCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactggctctttttcggggctgtggggtatttccagggcctctcctttaccactct > 1:70456‑M1/1‑172 (MQ=255) cGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactggctctttttcggggctgtggggtatttccagggcctctcctttaccactctn < 1:278577‑M1/251‑81 (MQ=255) gTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAgggggg < 1:21239/170‑1 (MQ=255) aCGTTCATAAAGCCCCTTTTCCAACGAACTGCGCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGGCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTGTCTTGCTGGTGGCTAAAATAGTCGCAAAGGGGGGtaaggccagtcagttaagcaactgactggctctttgtcggggctgtggggtatttccagggcctctcctttaccactctcgggaag < 1:219041‑M1/250‑87 (MQ=255) agaagtcagtgggttacgcagagaatcgtaacgggataccagatcaagagcctgtccaatgtgcataaaaaaatccggaaacaagtgagcgtttccggattcttacacagccactggatcggtcaactgatccttaactgatcggcattaCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTgg > 1:369699‑M1/151‑248 (MQ=255) gtcagtgggttacgcagagaatcgtaacgggataccagatcaagagcctgtccaatgtgcataaaaaaatccggaaacaagtgagcgtttccggattcttacaccgccactggatcggtcaactgatccttaactgatcggcattaCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAgg < 1:415386‑M1/105‑1 (MQ=255) ccAACGAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGAATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactggctctttttcggggctgtggggtatttccagggcctctcctttaccactctcgggaaggccctttcccttcttgtcggt > 1:422584‑M1/1‑144 (MQ=255) aCGAACTGCTCAGGCGGGAAATTCTTTCCGCGAATAAATGATGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAAGAGTCTCAAA‑GGGGGtaatgccagtctgttaatcaactgactggctctttttcggggctgtggggtatttccagggcctctcctttaccactctcgggaaggccctttcccttcttgtcggtaatt < 1:256854‑M1/251‑112 (MQ=255) acgggataccagatcaagagcctgtccaatgtgcataaacaaatccggaaacaagtgagcgtttccggattcttacacagccacaggatcggtcaactgatccttaactgatcggcattaCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAAtg < 1:161962‑M1/38‑1 (MQ=255) ggAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactggctctttttcggggctgtggggtatttccagggcctctcctttaccactctcgggaaggccctttcccttcttgtcggtaatttcacaagttgtccc > 1:384999‑M1/1‑125 (MQ=255) natcaagagcctgtccaatgtgcataaaaaaatccggaaacaagtgagcgtttccggattcttacacagccactggatcggtcaactgatccttaactgatcggcattaCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCg < 1:79255‑M1/67‑1 (MQ=255) ncgCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactgg > 1:43240‑M1/2‑114 (MQ=255) gcctgtccaatgtgcataaaaaaatccggaaacaagtgancgtntccgnatncttacacagccactgnatcggtcaactgatccttaactgatcggcattaCTCAAAGGGGGNNTNNNTNTCTTTGAg > 2:310415‑M1/102‑128 (MQ=255) gcctgtccaatgtgcataaaaaaatccggaaacaagtgagcgtttccggattcttacacagccactggatcggtcaactgatccttaactgatcggcattaCTCAAAGGGGGGGTATTTTTCTTTGAg < 1:310415‑M1/27‑1 (MQ=255) aaaTGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactngctnn > 2:282627‑M1/1‑106 (MQ=255) aaaTGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactggctctttttcn < 1:282627‑M1/145‑40 (MQ=255) cataaaaaaatccggaaacaagtgagcgtttccggattcttacacagccactggatcggtcaactgatccttaacggatcggcattaCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGATTACGATTTTGCCGTTAATCGTGc > 1:140286‑M1/88‑164 (MQ=255) gAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcatttaagcaact < 1:194065‑M1/109‑24 (MQ=255) gAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGGAGAGACATTTCTTGCTGGTGGCTAAAATAGTCTCAAAGTGGGGtaatgccagtcagttaagcaactgactgtctctttttcggggttgtggggtatttccagggcctctccgttaccactctctggaaggcccgtccccttcttgtcggtaatttcacaagttgtcccattcttgcaagatcgcgcatcagctccggtatacgtcccg < 1:203294‑M1/251‑166 (MQ=255) gtgagcgtttccggattcttacaaagccactggatcggtcaactgatccttaactgatcggcattaCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGNTAANNNNncann < 2:281575‑M1/80‑3 (MQ=255) gTCCTTTCTGCAAAAGTTCTGCGTAAAATGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcaggttagcaactggcttgctctttttcggggctgtggggtatttccaggggctctcctttaccactctcgggaaggccctttcccttcttgtn < 1:359689‑M1/182‑105 (MQ=255) ttccggactctgacacagccactggatcggtcaactgatcctgaactgagctgcattaTTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAgg > 1:68009‑M1/59‑110 (MQ=255) cTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactggctctttttcggggctgtggggt > 1:442880‑M1/1‑60 (MQ=255) tGCGTAAATTGCAAGGATAGACGTTTCTTGCTTGTGGCTAAAATAGTCTCAAAGGGGTGtaattccagtcagtgaggcaactgactggctctgtttcggggctgtggggtatttccagggcctctcctttaccactctcgggaaggccctttcccttcttg < 1:437035‑M1/161‑103 (MQ=255) gCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactggctctttttcggggctgtggggtatttccagggcctctcctttaccactctcgggaaggccctttccctgcttgtcggtaatttcacaagttgtcccatacttgcaagatcgcgcatcagctccggtatacgtcccggtgaagcgccctgcaatgtcatcag < 1:416268‑M1/248‑191 (MQ=255) acacagccactggatcggtcaactgatccttaactgatcggcattaCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGCACACATTTCATATTTCAACGAAAGACTAGTCTATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTgtn > 1:281575‑M1/47‑250 (MQ=255) actggatcggtcaactgatccttaactgatcggcattaCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGCACACATTTCATATTTCAACGAAAGACTAGTCTATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCg < 1:220526‑M1/212‑1 (MQ=255) cGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactggctctttttcggggctgtggggtatttccagggcctctcctttaccactctcgggaaggccctttcccttcttgtcggtaatttcacaagttgtcccatacttgcaagatcgcgcatcagctccggtatacgtcccggtgaagcgccctgcaatgtcatcagcattctcatcacc > 1:247971‑M1/1‑48 (MQ=255) gACGTTTCTTGCTGGTGGCTACAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactgg > 1:102114‑M1/1‑40 (MQ=255) aactgatccttaactgatcggcattaCTCAAAGGGGGGGTATTTTTCTTTGACCCAGGTTACTGTGGCAGCATTTAg < 1:418360‑M1/51‑1 (MQ=255) gatccttaactgatcggccttaCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGAACGAtttt < 1:376316‑M1/63‑1 (MQ=255) gatccttaactgatcggcattaCTCAAAGGGGGGGTATATTGCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGtgn > 1:46371‑M1/23‑98 (MQ=255) tggtggCTAAAATAGTCTCAAAGGGGGGtaatgccag > 1:162‑M1/1‑28 (MQ=255) tggtggCTAAAATAGTCTCAAAGGGGGGtaatgccag < 2:162‑M1/37‑10 (MQ=255) ggtggCGAAAATAGTCTCAAAGGGGGGtaatgccagtcagttaagcaactgactggctctttttcggggctgtggggtatttccagggcctctcctttaccactctcgggaaggccctttcccttcttgtcggtaatttcacaagttgtcccatacttgcaagatcgcgcatcagc < 1:36576‑M1/176‑150 (MQ=255) attaCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCg > 2:1653‑M1/5‑78 (MQ=255) attaCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGATAATGTGGCAGCATTTAGGAGTACGATTTTGCCGTTAATCg < 1:1653‑M1/74‑1 (MQ=255) ggTATTTTTCTTTGAGCCAGGTTAATGTGGTCTCATGTAGGAGTACGAGTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTtgtg < 1:291128/86‑1 (MQ=255) | CAATACCTGGCGGGCCAAGGAGGAACACACTTTCACCACTTAATGCCGCTAATAAACACAAGCGGATGGCGTGGCTACGTTCATAAAGCCCCTTTTCCAACGAACTGCTCAGGCGGGAAATTCTTTCCGCTAATAAATGAGGGTGAGCCATAATGAAGTGGCGTCCTTTCGTCAAAAGTTCTGCGTAAATTGCGAGTATAGACGTTTCTTGCTGGTGGCTAAAATAGTCTCAAAGGGGGGGTATTTTTCTTTGAGCCAGGTTAATGTGGCCGCATTTAGGAGTACGATTTTGCCGTTAATCGTGCATACTGTGCGCTTTTTTGTGGGCCAAGGGACTAAGCACACATTTCATATTTCAACGAAAGACTAGTCTATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATA > NC_000913/3930943‑3931385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |