Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,995,620 IS5 (–) +4 bp intergenic (‑261/‑32) uvrY ← / → yecU DNA‑binding transcriptional activator UvrY/protein YecU

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1397238NA (NA)4 (0.620) 3/318 0.4 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 1995623 0 (0.000)intergenic (‑264/‑32) uvrY/yecU DNA‑binding transcriptional activator UvrY/protein YecU
* ? NC_000913 1995620 =0 (0.000)5 (0.780) 3/318 0.4 100% intergenic (‑261/‑35) uvrY/yecU DNA‑binding transcriptional activator UvrY/protein YecU
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region

CATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAAGAAATGCACAAGTATTGT  >  NC_000913/2289895‑2290297
                                                                                                                                                                                                                          |                                                                                                                                                                                        
cATTACCAGCCTTGGGGTAAAACGGCTCGACGACTTCCACCATGTTTTGCCCTGGCAGAATCTGCTCCATGCGGGACACGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGCCAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCg                                                                                                                                                          >  1:64758/1‑251 (MQ=255)
    aCCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGGTTTGCCATGGCAGAAGCTGCGCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTGACTGCTGAATTCACTGTCGGCGAAGGTAAGTGGATGACGCGTGATGAGCCTTTTTCTATGGCGCGAGATGACAAACATGATCGCATAGCAGGGACGTGTTCGCACCTTTCATAACGCTGTAGCCACCAGAACAGATATTGCGGAAc                                                                                                                                                      <  1:154192/251‑1 (MQ=14)
     ccAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATATGCTACCTGCGGGACAAGAAAATCTCTTTTCAGGTCTGACGGCGCTTACTGCTGACTTCACTGTAGGCGCAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCACCCAGAACAGATATTGAGGAACg                                                                                                                                                     >  1:113756/1‑251 (MQ=14)
                        gCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATATCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCATGTTCTATGGCTTCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAAcc                                                                                                                                   >  1:171101/1‑250 (MQ=255)
                                                                                                              ctgctgAATTCACTGTCGGCGACGCTAAGTAGGTGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAAACTGATCTCATATCAGGGACTTGTTAGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGAACAGAAAATACCCATAGCTCCATACCCgg                                             >  1:146666/1‑250 (MQ=38)
                                                                                                                gctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGt                                          >  1:13323/1‑251 (MQ=255)
                                                                                                                                                        atgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAAGAAATGCACAAGTATtgt  >  1:8503/1‑251 (MQ=255)
                                                                                                                                                                                                                          |                                                                                                                                                                                        
CATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGAGTCAGTTTTTAAAAACTGTTTAAAGAAATGCACAAGTATTGT  >  NC_000913/2289895‑2290297

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.