| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,995,620 | IS5 (–) +4 bp | intergenic (‑261/‑32) | uvrY ← / → yecU | DNA‑binding transcriptional activator UvrY/protein YecU |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 4 (0.620) | 3/318 | 0.4 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1995623 | 0 (0.000) | intergenic (‑264/‑32) | uvrY/yecU | DNA‑binding transcriptional activator UvrY/protein YecU | |||||
| * | ? | NC_000913 | 1995620 = | 0 (0.000) | 5 (0.780) | 3/318 | 0.4 | 100% | intergenic (‑261/‑35) | uvrY/yecU | DNA‑binding transcriptional activator UvrY/protein YecU |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
CAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTG > NC_000913/1995429‑1995842 | gatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaactctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggatccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCAtt < 1:65619‑M1/60‑1 (MQ=255) cGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCATCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaatccttctctgctgactcagtcatttcatttcttcatgtttgag > 1:129103‑M2/1‑184 (MQ=255) tAAAAATGGTGGGTATGCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCACCAAAAATGAAAATCAGCCCTCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggcttacgcagtcatttcatgtcttcaagtttgagcc > 1:141851‑M2/1‑181 (MQ=255) ncatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTc < 1:46929‑M1/98‑1 (MQ=255) ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATAATTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAaac < 1:1639‑M1/105‑1 (MQ=255) ntctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgataacccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCaa < 1:17124‑M1/126‑1 (MQ=255) cACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGACACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcgtcatggttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccc > 1:169684‑M2/1‑109 (MQ=255) cTTACCGGATCGTTTCACAGTAAGCCCTACGAGGAAATGTGACAAAAAGTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaagn > 1:20499‑M2/1‑100 (MQ=255) catatcagggacttggtcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTGTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTg > 1:119565‑M1/28‑250 (MQ=255) | CAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTG > NC_000913/1995429‑1995842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |