| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,995,620 | IS5 (–) +4 bp | intergenic (‑261/‑32) | uvrY ← / → yecU | DNA‑binding transcriptional activator UvrY/protein YecU |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1397238 | NA (NA) | 16 (1.240) | 15/318 | 0.0 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1995623 | 0 (0.000) | intergenic (‑264/‑32) | uvrY/yecU | DNA‑binding transcriptional activator UvrY/protein YecU | |||||
| * | ? | NC_000913 | 1995620 = | 0 (0.000) | 17 (1.320) | 16/318 | 0.0 | 100% | intergenic (‑261/‑35) | uvrY/yecU | DNA‑binding transcriptional activator UvrY/protein YecU |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
GGATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCAAGAACTGGCAAA > NC_000913/1995380‑1995867 | ccagcggataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAAccc < 1:2605‑M1/11‑1 (MQ=255) gATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTGCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtg > 1:196362‑M2/1‑243 (MQ=255) aCGCTACTGATAGTTTGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCGACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaa > 1:104142‑M2/1‑239 (MQ=255) taccagccttggggtaaaacggctcgatgacttcccccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattccctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagctgaaaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTc < 1:116940‑M1/35‑1 (MQ=255) ccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagcaaatctcttttctggtctgacggagcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggccttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCAt < 1:222243‑M1/37‑1 (MQ=255) tAAAAATGGGGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTTCACAGTTATGGTAACGCGCGTCGCGAACGGCTTAGCGGATCGTTTCACAGTAAGCCCTACGATAAAATGTGACAAAAATTGACTATATGCAGCAAAGATGAAAAGCAGTCCGTTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcaggcatttcattgcttcatgtttgagcc > 1:82291‑M2/1‑181 (MQ=255) gccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGc < 1:115424‑M1/80‑1 (MQ=255) ggtggGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATTGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAAGGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCATCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctggctcagtcatttcatttcttcatgtttgagccgatttttt > 1:111369‑M2/1‑174 (MQ=255) catggcagaatctgctccatgcggtacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgagccctgttgtatggctccagatgacaaacatgatctcatatcagggtcttgttcgcacgttccTTAATTAACCCGAGCAATACGGGCAAAAAACATTCATGATAAAAATATTTATTg > 1:134661‑M1/170‑223 (MQ=255) ccaagaaaatctcttttctggtctgaaggcgcttaccgctgcattcactgcagacgtagctacgttgatgactcatgatgaaccctgttctatggctacagctgaccaacatgatctcacatcagggactcgttcgcaccttccTTAATTCACCCGACCAATACGGGCAAAAAACATTCATGATAAACATATTTATTGGTCATTATATTCACGTATTTTATAGCACTGCCGATATCACGCTCAAAAaaca < 1:121823‑M1/106‑1 (MQ=255) ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcaaatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGc > 1:292526‑M1/126‑249 (MQ=255) gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCAc > 1:223395‑M1/121‑202 (MQ=255) gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGt < 1:106862‑M1/136‑1 (MQ=255) cAACGGCTTACCGGATCGTTTCACAGTAAGCCCTTCGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCTGCTGAATTTGTAACATTAAggaaggttcgaataagcgtggaaattcttctcggctgacgcagtcatttcatttcggcatgtttgagccgatggtttctcccgtaaatgcctttaatcagcctatttagaccgtttcttcgccatgtaaggcgttatccccagtt > 1:192402‑M2/1‑106 (MQ=255) aCGGCTTACCGGATCGTTTCACAGTAAGCCCGACGATGAAATGTGACAAAAATGGACTTTATTCAGCAAAAATGAAAATCATCCCGCTGAATATGTAACATGAAggaaggggcgaataagcggggaaattcgtctcggctgactcagtcatttcattgcttcaggtttgagccgatttgttctcccgtaaaggccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt > 1:156755‑M2/1‑104 (MQ=255) ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCa < 1:83301‑M1/93‑1 (MQ=255) cgaaggttagttgatgactcatgatgaaccctgttctatggcgccagatgacaaacatgatctcatatcagggacttgttctcaccttccTTAAGTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATGTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTc > 1:145385‑M1/91‑251 (MQ=255) gATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactnagtnnnnncannnnnn < 2:174544‑M2/150‑58 (MQ=255) gatganncannntgnnccctgttctatggctccagatganaaacatgatctcatatcagggacttgttcncncnttccNNAATNAACCCGAACANTACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTNANGTATTTTATAGCACTGCCg < 2:219205‑M1/87‑1 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagtgacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCg > 1:219205‑M1/79‑165 (MQ=255) tccctACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcgtctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagtccggttcttctccatttaaggcgttatccccagtttttagtgagatctctcc > 1:48867‑M2/2‑77 (MQ=255) natGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGACAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgaatttttctcccgtaaatgccttgcatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggt < 1:37061‑M2/250‑182 (MQ=255) aaaTGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagncgannnnntc < 2:175945‑M2/144‑79 (MQ=255) cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATAGTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTAGTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTGTCACCGCAAATTTTCATTGCAACATGACGAg > 1:117584‑M1/62‑251 (MQ=255) gACAAAAATTGACTTTATTTAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagcggggacattcttctcggctgactccgtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagccgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaa < 1:148348‑M2/250‑191 (MQ=255) cAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgcgaataagctgggaaattcttctcggctgcctcagtcatttcatttcttcatgtttgagcagattttttctcgcgtaaatgccttgaatcagcctatttagaccgtttcttcgccctttaaggcgttataccccgtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacc < 1:220265‑M2/251‑194 (MQ=255) gatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTAGTGGTCATTATATTAACGTATGTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTccgcc > 1:117559‑M1/45‑190 (MQ=255) cAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAAggaaggtgagaataagcggggacattcttctcggctgaatcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgacatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaat < 1:223470‑M2/251‑211 (MQ=255) catatcagtgacttgttcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTGc > 1:262211‑M1/28‑251 (MQ=255) tcgcaccttccTTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTCTTGGACATTATATTCACGTATTTTATAGCACTGCCGATATCACGCTCAAACAACAACCACTGCTATTTTTAGCAACGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTTATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCAAGa < 1:142775‑M1/239‑1 (MQ=255) gTAACATTAAggaaggtgcgaataagnggggaanntcntctcggctgactcagtcatntcnnntnnncntgtttnagnngattttttcncccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcnttatccccannttttagtgagatctctcccacngacnnannanttgngc < 2:62156‑M2/192‑183 (MQ=255) gTAACATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttgttagtgagatctctcccactgacgtatcatttggtccgcccgaaacagg > 1:62156‑M2/1‑10 (MQ=255) aCATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttcagcaacc > 1:63853‑M2/1‑7 (MQ=255) | GGATAACGCTACTGATAGTTAGTCATTCGTATATTAGCGGTTTTTATTGCAACTTTGAAACGTTAAAAATGGTGGGTATTCGATTTTTCTCTCGTTTTTGTCAATTCGATTGTCCACAGTTATGGTCACGCCCGTCACCAACGGCTTACCGGATCGTTTCACAGTAAGCCCTACGATGAAATGTGACAAAAATTGACTTTATTCAGCAAAAATGAAAATCAGCCCGCTGAATATGTAACATTAATTAACCCGAACAATACGGGCAAAAAACATTCATGATAAAAATATTTATTGGTCATTATATTAACGTATTTTATAGCACTGCCGATATCACGCTCAAAAAACAACCACTGCTATTTTTAGCAAAGCTTATGGTATACTCCGCCGCCTTAACATTTTTCACCGCAAATTTTCATTGCAACATGACGAGGAAAATAAATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCAAGAACTGGCAAA > NC_000913/1995380‑1995867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |