New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 780918	77 (0.790)	5 (0.070)	3/436	7.3	9.4%	noncoding (76/76 nt)	lysW	tRNA‑Lys
	?	NC_000913	781445 =	39 (0.540)					intergenic (+1/‑132)	lysZ/lysQ	tRNA‑Lys/tRNA‑Lys
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACA  >  NC_000913/781161‑781744                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                                              gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTACGCCAGCAACGGCCCGTAGGGCGAGCGGAGCGAGTCATCCTGCACGACCCAACAATCTTAAAGGTTGACACAAAGTAAAAATATTTCAGGTACCACCCGTACGGGTCGTTAGCTCAGTTGGTAGAGCAATTGACTCTTAATCAATTGGTCGCAGGGTCGAATCCTGCGCGAACCACAAATTTAAAggcgattac                                                                                                                                                                                                                                                                                                >  2:354285/1‑293 (MQ=21)         gccAGTTGACTTTTAATCAAGCGGTCGCACGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                                                                                                                                                                                                                                                                       <  1:289139/283‑1 (MQ=255)            aGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCTAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATGGGCCCCGAGGAAAAATCTTGCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGaa                                                                                                                                                                                                                                                                                     <  1:543565/299‑1 (MQ=255)            aGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGaa                                                                                                                                                                                                                                                                                     <  1:542460/299‑1 (MQ=255)                                   gCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAg                                                                                                                                                                                                                                                              <  1:293212/299‑1 (MQ=255)                                     aGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACCCAGATGTTAAGCGTTAAGGATAACGTTGCGCCAGCNACGGCCCGTAGGGCGATCTAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCa                                                                                                                                                                                                                                                            <  1:167750/299‑1 (MQ=255)                                      ggTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGCAGGATAACGTTGCGTTAGCAAc                                                                                                                                                                                                                                                          >  1:491379/1‑300 (MQ=255)                                                                       aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATcc                                                                                                                                                                                                                          <  1:757772/299‑1 (MQ=255)                                                                          aaaCGCAGATGTTAAGTGGTAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGTGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAg                                                                                                                                                                                                                                <  1:492346/290‑1 (MQ=255)                                                                           aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                                     <  1:191154/300‑1 (MQ=255)                                                                              tCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGTGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAc                                                                                                                                                                                                                  <  2:834821/300‑1 (MQ=255)                                                                              tCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAc                                                                                                                                                                                                                  <  1:648648/300‑1 (MQ=255)                                                                                aGATGTTAAGCGTGAAGGATAACGTTGCGTCAGCAACGGCCCGTAGTGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGAGTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAc                                                                                                                                                                                                                  <  1:649247/298‑1 (MQ=255)                                                                                  aTGTTAAGAGGGGAGGAGAAAGTTGCGCTAGCAACGGCCCGTAGGGCGAGCGAAGCAAGTCACCCTGCACGACCCACCAATTGTAAAGATTGGCTCTGAGTAAAAATCCTGCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGGAGAGCAGTTGACTCTTAAGCAATTGGTCGCAGGTTCGAATCCTGCACGGCCCACCAATTTAAAGGTGGTTACTGTGA‑GAAAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAc                                                                                                                                                                                                                  <  2:341909/296‑1 (MQ=21)                                                                                                ggATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGGAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCATTTGACTTTTAATCAATTGGGCGCAGGTTCGAATCATGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                                     <  1:16874/279‑1 (MQ=255)                                                                                                ggATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGCAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAACCACCATCCTGAATGAtt                                                                                                                                                                                                >  1:723152/1‑300 (MQ=255)                                                                                                ggATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAAATCGGCCCCAAGTAACCTTCTTTCCGGTAACACCCGTATGGGTCGTTAGCTCCATTGGTGGAGCAGTTGATTCTTACTCAACTGGTCGCAGTTTCGAATCCTGCACGACCCACCAATTTAAAGGTGATTACTGGTA‑GAGGATGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGACAAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGAtt                                                                                                                                                                                                >  2:840952/1‑300 (MQ=255)                                                                                                     aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATANCGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGgc                                                                                                                                                                                           >  1:162836/1‑300 (MQ=255)                                                                                                     aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGgc                                                                                                                                                                                           <  1:561382/300‑1 (MQ=255)                                                                                                     aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTGAAAGATTGGCCCCGAGGAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGgc                                                                                                                                                                                           <  1:84542/300‑1 (MQ=255)                                                                                                          gcgcCAGCAACCGCCCGTAGTTCAAGCGAAGCGAGTCACCCTGCACGACCCACCACTCTTAAGGATGGGCTCCGAGGGAAAAGCATTCAGGTGACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCAt                                                                                                                                                                                      <  1:801874/300‑1 (MQ=25)                                                                                                                gCAACTGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCATGACCCACCAATCTTAAAGATTGGCCCCGAGGAAAAATCTTTCAGGTAACACCCTTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTGCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGGGAAGGAGAACGTTGCGTTAGCAACGGCCCTAAGGGCGAGACGGAGTCGAGTCATCCTGCACGACccaccaatgtaaaaa                                                                                                                                                                                                   <  2:545490/281‑10 (MQ=37)                                                                                                                gCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTGGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACccaccaatgtaaaaa                                                                                                                                                                                                   >  1:545490/1‑272 (MQ=255)                                                                                                                                           aGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAGATCTTTCAGGTAACACCCGTATGGGTCGTTNGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTag                                                                                                                                                    <  1:156993/300‑1 (MQ=255)                                                                                                                                           aGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTag                                                                                                                                                    <  1:299287/300‑1 (MQ=255)                                                                                                                                           aGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTNGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGTTag                                                                                                                                                    <  1:178588/300‑1 (MQ=255)                                                                                                                                               aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGCGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCa                                                                                                                                                >  1:44264/1‑300 (MQ=255)                                                                                                                                               aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATACTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGc                                                                                                                                                 >  2:678035/1‑299 (MQ=255)                                                                                                                                               aTCCTGCACGACCCACCAATCTTAAAGATTGGCACCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTAGTAGAGCa                                                                                                                                                >  1:45119/1‑300 (MQ=255)                                                                                                                                               aTCCTGCACGACCCACCAACCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTATAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGt                                                                                                                                                      <  2:364909/294‑1 (MQ=255)                                                                                                                                                         aCCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATcc                                                                                                                                                                                                         <  1:738032/234‑1 (MQ=255)                                                                                                                                                         aCCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATcc                                                                                                                                                                                                         <  1:329138/234‑1 (MQ=255)                                                                                                                                                         aCCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATcc                                                                                                                                                                                                         >  2:329138/1‑234 (MQ=255)                                                                                                                                                         aCCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGGCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATcc                                                                                                                                                                                                         >  2:738032/1‑234 (MQ=255)                                                                                                                                                                                   gggTAAAAATCTGGTAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCNCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGTTA‑GAGAACGTGAATGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAATTCGATTAATCATGCATGATCTGTTGTTCGGAGAGATTGATGCGACACAA‑CCACCAAGCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                                            <  1:598725/298‑1 (MQ=16)                                                                                                                                                                                   gattgaaaaTCTTTCAGGTAACACCCGTATTGGTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                                            <  1:483737/295‑1 (MQ=255)                                                                                                                                                                                   gAGTAAAAATCTTTCAGGTAACACCCGTATTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                                            <  1:482145/300‑1 (MQ=255)                                                                                                                                                                                       aaaaaTCTTTCAGTTAACACCCGTATGGGTCGTTAGCTCAGTTTTTAAATCAGTCGACTTTTAATCAAGTGGTTGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGTTGGTTACTGGTATGA‑AACGTGGAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTg                                                                                                                                                        <  1:220028/252‑1 (MQ=25)                                                                                                                                                                                                    gTAACACCCCTCCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTa‑g                                                                                                                                                                                                                                                                                         <  2:232435/111‑1 (MQ=17)                                                                                                                                                                                                          cccGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑gagaccttgcaggat                                                                                                                                                                                                                                                                           >  2:476608/1‑108 (MQ=255)                                                                                                                                                                                                                   gTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACg                                                                                                                                                                                                                                                                       <  2:381486/114‑1 (MQ=255)                                                                                                                                                                                                                   gTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATCATCCAGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGTAGTTGACTTTTAATCAATTAGTCGCAGGTTCGACTCCTGCACGACCCCCCCATGTAAAAAAgcgtacta                                                                            >  2:3096/1‑295 (MQ=37)                                                                                                                                                                                                                     cGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTCGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAACCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTTGCCGGTTCGAATCCTGCACGACCCAACAATGTAAAAAAgagcactaga                                                                          >  2:796291/1‑291 (MQ=255)                                                                                                                                                                                                                       gtagcgcagtggtgggagtaGTTTACTTGTAATCGATTGGTCGCAGGTTCGAATCATGTACGACACACCAATTGAAAGGTGGTTGCTGGGA‑GAGAACGTGAAGGATAACGTGGCTTTAGCAATGGCCCGGAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCTATCATCCTGAATGATTAAGGCAGTGTAATCCCGCGAT‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAgg                                                                        <  1:226531/281‑1 (MQ=21)                                                                                                                                                                                                                             ccgTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttt                                                                  >  1:799147/3‑300 (MQ=255)                                                                                                                                                                                                                                     agaacAGTTGACTTTTAATCACTGGTTCGCAGGTTCGAATCCTGCACGACACACCAATTGAAAGGTGGGTACTGGTA‑GAGAACTTGAATGATAACGTGGCGTTAGCAACGTCCCGAAGGGTGAGACTGAGTAGAGTCAGCCTGCAAGATATGTCGTCCGGAGTGATGAAGGTAGCGTAATCCCTCAAT‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaaaa                                                                                     <  2:744024/269‑1 (MQ=16)                                                                                                                                                                                                                                            ttGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTGAGCAATGGCCCGAAGGGTGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCGGAATGATTAATGCAGCATAATCCCGCAAG‑GAGTCGTTAGCTCAGTTGGTAGAGCAGGCGACGTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGAt                                                   <  1:660557/300‑1 (MQ=37)                                                                                                                                                                                                                                              gACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATAc                                                 <  1:809007/300‑1 (MQ=255)                                                                                                                                                                                                                                                     aaTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggtccct                                                                                                                                                                                                                                                                                               >  2:752988/1‑53 (MQ=255)                                                                                                                                                                                                                                                                      ttCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCCCCATCCTGAATGATTCAGGCAGCATACTCCCTCCAG‑GGGTCGTTCTCTCAGTTGGTAGCGTCGTCGACTTTTAATCAATTGGTAGCAGGTTTGAATCCTGCACGACGCACTAATGTCAAAAAGCGCCCTAAAAACACTTTTTTGCTATCTGCGATATTCAAAGATTCGAACCTgcagca                           >  1:738006/1‑298 (MQ=37)                                                                                                                                                                                                                                                                      ttCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAACCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAGG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTCAAGGCGCTTTTTTGCTGTCTGCGATCCTc                                               >  2:454631/1‑278 (MQ=255)                                                                                                                                                                                                                                                                           aTCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAcatc                                                                                                                                                                                                                  >  2:590704/1‑108 (MQ=255)                                                                                                                                                                                                                                                                           aTCCTACACGACCCACCAATTTAAAGGTGGTTACTGGCA‑GAGCACGTGAAAGATAACGTTACATTAGCCCCAACCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCCCCATCCTAACTGATTCCGGCCGCATAATCCCGCAAA‑GGGTCGTTAACTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGCCTCCTGCa                                                                                                        >  2:590715/1‑216 (MQ=21)                                                                                                                                                                                                                                                                               tGCACGACCCACCAATTTAAAGGTGGTTACTGTTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagt                  <  1:457646/298‑1 (MQ=255)                                                                                                                                                                                                                                                                                             aTTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGNCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAaaca  >  1:158209/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                                              GTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTA‑GAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACA  >  NC_000913/781161‑781744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.