New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 78122256 (0.650)8 (0.130) 6/438 4.9 16.9% noncoding (76/76 nt) lysY tRNA‑Lys
?NC_000913 781445 = 37 (0.580)intergenic (+1/‑132) lysZ/lysQ tRNA‑Lys/tRNA‑Lys
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTT  >  NC_000913/781162‑781729
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                            
ttGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACt                                                                                                                                                                                                                                                                              <  1:378856/300‑1 (MQ=255)
 tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATATCAAAGATTGGTCCCA‑CGTACACCTCCTTACAA‑TAGCG‑CCCGTATTGGTCGTTGGGTCAGTTGGTAGAGTAGTTGACTTTTAATCAATTGGTCGAAGGTTCGAATCCTGCACGACCAAACAGTTTAAAGGTGGTTACt                                                                                                                                                                                                                                                                              >  1:453013/1‑299 (MQ=17)
       agtagtggACTTTTAACCAAGTGTTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAATGCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTGAAAGATTGGCCCTG‑AGGAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                                                                                                                                                                                                                                                       <  1:246986/293‑1 (MQ=37)
       agcattttaCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACACCAAACTCAGATGTTAAGCGTGAAGGATAACTTTGCGCCAGCAACGGCCCTTAGGGCTAGCGACGCGATTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGGTGGCGAGAT‑‑TGTCGTGTGGGATCGGGGGTGGGT‑ATGAGAGACGGTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                                                                                                                                                                                                                                                       <  1:448888/292‑1 (MQ=12)
                         aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGTTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                                                                                                                                                                                                                                                      <  1:545056/299‑1 (MQ=255)
                         aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                                                                                                                                                                                                                                                      <  1:544884/299‑1 (MQ=255)
                                    ggTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGAGGTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCTCGTAGGTCGAGCGAGGCGGGTCGGCCTGCAAGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAAGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc                                                                                                                                                                                                                                          <  2:400884/300‑1 (MQ=38)
                                    ggTTCGAATCCTGCACGACCCACCAGTTTCAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc                                                                                                                                                                                                                                          <  2:7234/300‑1 (MQ=255)
                                                                     accaaccgccgATGGTAAGCGTTAAGGGTGACGTTGCGCCAGCAACGTCCCGTAGTGCGAGCGAATCGAGTCATCCTGCACGACCCACCAATCTTAAGGATTGGCCCCG‑AGTGGAGATC‑CTTCAGGTAACC‑CCCGTGTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACGGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATcc                                                                                                                                                                                                          <  2:83383/289‑1 (MQ=25)
                                                                        aggagaggggggtaagaggtaaGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc                                                                                                                                                                                                                                          <  1:383086/244‑1 (MQ=255)
                                                                         agacaaGATGTTAAGCGTGGAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGNCCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCATTTAACA‑CCCGTATTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAGGTGGGTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                     <  1:132305/295‑1 (MQ=37)
                                                                         aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                     <  1:679703/300‑1 (MQ=255)
                                                                         aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTCGACTGTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                     <  1:425988/300‑1 (MQ=255)
                                                                            tCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAc                                                                                                                                                                                                  <  1:537472/300‑1 (MQ=255)
                                                                               gATGTTAAGCGTGGAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGNCCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                     <  1:132913/294‑1 (MQ=255)
                                                                               gATGGTAAGCGTGAAGGATAACGTTACGCCAGCAATGGCCCGTAGGGCGAGCTAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGTTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                     <  2:102949/294‑1 (MQ=255)
                                                                                   ttAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCAt                                                                                                                                                                                           <  1:414344/300‑1 (MQ=255)
                                                                                              ggATAACGTTGCGCCANCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATATCAAAAATCGTCCCCG‑CATACACATC‑TCCAAGCCCACA‑CCCACCTAGCTCTCCCGCTCAGTTGGTAGAGCCGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCATGACCCAGCAATGTAAAAGTGGTTACTGGTAGAGAACGTGGAGGATAATGGTGAGTTAGCAACGGACCGAAGGGCGAGATGAAGNCGAGTCATCTTGCACGaanaaacctcctga                                                                                                                                                                                      >  1:589884/1‑281 (MQ=12)
                                                                                              ggATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGAtt                                                                                                                                                                                >  1:454025/1‑300 (MQ=255)
                                                                                                   aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                     <  1:16331/274‑1 (MQ=255)
                                                                                                   aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCACAG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                     >  2:16331/1‑274 (MQ=255)
                                                                                                     ttcatgccacaaaCGTCCCGTAGGGCGATCGAAACGAGTAATTCTATGCGACCCACCAATTTGAAAGATTGGCCCTG‑AGTGCAAATC‑TTTCAGTTAAAG‑CCTGGATGGGTCGTTAGCTCAGTTGGTAGATCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAATTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGgc                                                                                                                                                                           <  2:160162/287‑1 (MQ=18)
                                                                                                        gcgcCAGCAACGGCCCGTATGGCAAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTGCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGTTAGAGCAGTTTACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGgc                                                                                                                                                                           <  2:64920/295‑1 (MQ=255)
                                                                                                        gcgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAAAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGGTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCAt                                                                                                                                                                      <  1:454453/300‑1 (MQ=255)
                                                                                                                               gagcgaAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGGGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGc                                                                                                                                                <  1:414412/299‑1 (MQ=255)
                                                                                                                                   gaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGACGAAGTCGAGTCGTATTGCACGACCCACCATCCTGAACGATTAAGGCAGCAGAATCCCGCaa                                                                                                                                                            >  2:372572/1‑283 (MQ=255)
                                                                                                                                             aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCAG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCAACAATTTAAAGGTGGTTACTAGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAATCGAATCATCCTGCACGACCCACCACCCTGAATGATTAAGGCAGCATAATCACGAAAGGGGTCGTTCGCTCAATTgataaaaca                                                                                                                                 >  1:435176/1‑292 (MQ=37)
                                                                                                                                                      gACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACttt                                                                                                                        <  1:344000/300‑1 (MQ=255)
                                                                                                                                                                tcgtAAAGATTGGCCCCG‑AGTGAAAATC‑TTGCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                                                                                                                                                                                                                                                      <  2:661736/129‑1 (MQ=255)
                                                                                                                                                                tcctAAAGATTGGCCCCG‑AGTAAAAATC‑CTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTAGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCAt                                                                                                                                                                                           <  1:569855/220‑1 (MQ=255)
                                                                                                                                                                tCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTg                                                                                                              <  1:603208/300‑1 (MQ=255)
                                                                                                                                                                 cTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTCAGTTGGCAGAGCAGTTGACTTTTAATCAAt                                                                                                                >  1:258612/1‑297 (MQ=255)
                                                                                                                                                                 cTTAAAGATTGGCCCAG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCACGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAAGAAGAATAATCACGCAAGGGGTCGTTAGATCAGTTGGTAGAGCAGTTGAATTTTAATCAAtt                                                                                                               >  1:258700/1‑298 (MQ=37)
                                                                                                                                                                                 g‑AGTAAAAACC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTGTAATCAATTGGTCGCAGGTTCGAACCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAAAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGAGTAAGGCAGCATAATCCCGCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                             <  2:640372/300‑1 (MQ=255)
                                                                                                                                                                                        aaaTC‑CTTTAGGTAACA‑CCCGTGTGGGGCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGGTAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGtt                                                                                                                                                   <  2:242750/240‑1 (MQ=25)
                                                                                                                                                                                                      tcacccaccaccgggTNGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAggg                                                                                                                                                                                                                               <  2:512822/140‑1 (MQ=255)
                                                                                                                                                                                                      tcacccaccaccgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAg                                                                                                                                                                                                                                                              <  1:607222/109‑1 (MQ=255)
                                                                                                                                                                                                           cccGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaaaa                                                                      >  1:92857/1‑300 (MQ=255)
                                                                                                                                                                                                              gTATGGGTCGTTAGCTCGGTTGGTAGAGTAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACTTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaaaa                                                                      <  1:460385/297‑1 (MQ=255)
                                                                                                                                                                                                                        ttAGCTCAGTTGTTAGATCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGNTGGTTACTGGTATAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAgg                                                         <  1:145628/300‑1 (MQ=255)
                                                                                                                                                                                                                        ttAGCGCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAATNTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGTCAGCATAACCCCGCAATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAgg                                                         <  1:146900/300‑1 (MQ=255)
                                                                                                                                                                                                                                    gTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACTACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCt                                             >  1:60065/1‑300 (MQ=255)
                                                                                                                                                                                                                                    gTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACTACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCACTAAAGGCGCTTTTTTGCt                                             >  1:59786/1‑300 (MQ=255)
                                                                                                                                                                                                                                    gTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCt                                             >  2:566350/1‑300 (MQ=255)
                                                                                                                                                                                                                                       gagCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGTTTTTTTGCTATc                                          >  2:601977/1‑300 (MQ=255)
                                                                                                                                                                                                                                       gagCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGAGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCACTGTAAAAAAGTGCCCTAAAGGCGCTTTTTTTCTATc                                          >  2:92625/1‑300 (MQ=255)
                                                                                                                                                                                                                                            gTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGa                                     >  1:203289/1‑300 (MQ=255)
                                                                                                                                                                                                                                                 cTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTc                                >  1:410231/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                       ttCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTgcagca            >  2:422462/1‑298 (MQ=255)
                                                                                                                                                                                                                                                                               cTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCAAGACGAAGTCGAGTCATCCTGCACAACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAATGTAAAAAAGCGCACTAAAGGCGCTTTTTTGCTATCTGGGACACTCAAAGATTCGCATATGCAGAAGGTttgagtt  >  2:350517/1‑300 (MQ=25)
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                            
TTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCAGGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTT  >  NC_000913/781162‑781729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.