New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781222	56 (0.650)	8 (0.130)	6/438	4.9	16.9%	noncoding (76/76 nt)	lysY	tRNA‑Lys
	?	NC_000913	781445 =	37 (0.580)					intergenic (+1/‑132)	lysZ/lysQ	tRNA‑Lys/tRNA‑Lys
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAC  >  NC_000913/780928‑781497                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                          tCGAAGACAGATGTTAAGCGTGTAGGATAACGTTTCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCTTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAg                                                                                                                                                                                                                                                                                          <  1:255646/296‑1 (MQ=255)          gATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAAAATCaa                                                                                                                                                                                                                                                                              >  1:83383/1‑299 (MQ=255)                    gtgtAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCCGCACAACCCACCACTCCTGACGGTGGGATCGGGGGAGGTGGCTTGTAATCCCCCTCGCAGGGGCGGGTGAGTAGCCCCTCTAGAAGAGCAAATCCCCGATAAGGATTGGGTCGGTGATTCGCTCCCACAATCAACCAATACTCGGGTAGTTAGCTTAGTTGGTAGAGCAGTTGAATTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCAACCAGTTTTAACGTCAAACTCa                                                                                                                                                                                                                                                                         >  2:454453/1‑294 (MQ=12)                       tAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATTACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAg                                                                                                                                                                                                                                                                <  1:28198/300‑1 (MQ=255)                                      tCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTNGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                 <  1:157236/300‑1 (MQ=255)                                        aGCAACGGCCCGTAGTGCAAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTTGGTTCGGGGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCCGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                 <  1:208012/298‑1 (MQ=255)                                                cccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTCAAAATCaacccca                                                                                                                                                                                                                                                                         >  1:611051/1‑261 (MQ=255)                                                           agcgaagcgaGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTa                                                                                                                                                                                                                             >  1:457409/1‑299 (MQ=255)                                                                   gaGTCATCCTGCACGACCCACCAATAATGAAGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTACAAGGCGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTCAACATCAAAATCCGATGTTACGCGTGAAGGATAACGTTGCGCCAGCCACGGGCCGTAGGgcgag‑c                                                                                                                                                                                                                    >  2:378856/1‑299 (MQ=17)                                                                        aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTCTCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTACTCAATTGGTCGCAGGTTCGAATCNTGCACGACCCACCAGTTTTAACATCACACTCa                                                                                                                                                                                                                                                                         >  2:537472/1‑242 (MQ=255)                                                                        aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCNTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGag‑cgaag‑c                                                                                                                                                                                                              >  2:545056/1‑299 (MQ=255)                                                                        aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCNTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAAAGTTGCGCCAGCAACGGCCCGTAGGGCGag‑cgaag‑c                                                                                                                                                                                                              >  2:544884/1‑299 (MQ=255)                                                                        aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGag‑cgaag‑c                                                                                                                                                                                                              >  1:682035/1‑299 (MQ=255)                                                                        aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCAGTAGGGCGag‑cgaag‑c                                                                                                                                                                                                              >  1:207238/1‑299 (MQ=255)                                                                           cTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGTTCAGCTGGGAGAGCACCTACCTTAAAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTCGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGt                                                                                                                                                                                                                                                 >  2:321696/1‑263 (MQ=255)                                                                            tGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCNCCTCCCTGACAATGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTc                                                                                                                                                                                                         <  2:545873/300‑1 (MQ=255)                                                                                  aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGTTGAGTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccaccaa                                                                                                                                                                                                                                                                                          <  2:315751/215‑2 (MQ=255)                                                                                  aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAACCTCAGCTGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATcc                                                                                                                                                                                                     >  2:414344/1‑298 (MQ=255)                                                                                  aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAATGTTGCGCCTGCAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCATCCt                                                                                                                                                                                                    >  2:240737/1‑299 (MQ=255)                                                                                  aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCt                                                                                                                                                                                                    >  1:242750/1‑299 (MQ=255)                                                                                  aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCATCCt                                                                                                                                                                                                    >  2:679703/1‑299 (MQ=255)                                                                                       ccacTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTTAACATCAAACTCAGATGTTACGCGTGAAGGATAACGCTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGa                                                                                                                                                                                              >  1:670278/1‑300 (MQ=255)                                                                                                                         gtagtaTCCAGCGCAGTATCGGGTGGTTAGCTCAGCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTCAGCGTGAAGGATAACGTTGCGCAAGCAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTCTTaaa                                                                                                                                                                               >  1:36418/1‑281 (MQ=255)                                                                                                                                   gcgcAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCAAGACCAACCAATCTTAAAGATTGGAAACG‑AGTAAAAATC‑TTTAA‑GGt                                                                                                                                               >  2:344000/1‑300 (MQ=255)                                                                                                                                        gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCGACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAaca‑c                                                                                                                                         >  1:598889/1‑300 (MQ=255)                                                                                                                                        gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCAG‑AGTAAAAATC‑TTTCA‑GGTCACA‑cc                                                                                                                                        >  1:598863/1‑300 (MQ=255)                                                                                                                                        gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCAACAGTTTTAACATCAAAATCAGATGTTAAGCGTGGAGGATAACGTTGCGCCAGCAACGGCCCGTCGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCAACAATCCTAAAGATTGGCCACG‑GGTAAAAAGC‑TTTCA‑GGTacccac                                                                                                                                         >  1:598891/1‑295 (MQ=14)                                                                                                                                        gTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCACCG‑AGTAAAAATC‑TTTCA‑GGTAaca‑c                                                                                                                                         >  1:640372/1‑300 (MQ=255)                                                                                                                                         tctcttgTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTTGATCCCTTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑cc                                                                                                                                        <  1:525605/294‑1 (MQ=255)                                                                                                                                                           gCTGGGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATCCCGTCACCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccaccaa                                                                                                                                                                                                                                                                                          <  2:417098/142‑2 (MQ=12)                                                                                                                                                           gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccaccaa                                                                                                                                                                                                                                                                                          >  1:417098/1‑141 (MQ=17)                                                                                                                                                           gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGAACCACCAATCTTAAAGATTGGCACCG‑AGTAAAAATC‑TTTCA‑GGTACCA‑CCAGTATGGGTCGTTAGCTc                                                                                                                      >  2:603208/1‑300 (MQ=255)                                                                                                                                                           gCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTCAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAAGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCACG‑AGtcacaccctttccggtacca                                                                                                                                             >  1:263069/1‑261 (MQ=17)                                                                                                                                                                    gCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTa                                                                                                              >  1:400884/1‑299 (MQ=255)                                                                                                                                                                    gCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTAA‑GGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTa                                                                                                              >  1:7234/1‑299 (MQ=255)                                                                                                                                                                      aCCTCCCTTACAAGTAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCGACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTagag                                                                                                           <  2:598889/300‑1 (MQ=255)                                                                                                                                                                      aCCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTagag                                                                                                           <  2:598863/299‑1 (MQ=255)                                                                                                                                                                            cTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGccc                                                                                                                                                                      >  2:601689/1‑239 (MQ=255)                                                                                                                                                                            cTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGccc                                                                                                                                                                      <  1:601689/239‑1 (MQ=255)                                                                                                                                                                            cTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTCAACATCCACCTCAGATGTTCAGCGTGAAGGATAACGTTGCTCAAGCAACAGCACGTAGGGCGAG‑CGCAA‑CGAGTAATCCTGCACGCACCAACAATCTTAACGATTGGCACCT‑AGTAAAAA‑C‑TTTTACGGTAACA‑CCAGTATGGGTAGTTAGATCAGTTGGCAGAGCatct                                                                                                      >  2:255449/1‑296 (MQ=17)                                                                                                                                                                                       ggggTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCCAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGTAAGCAACGGCCCGTAGGTCGAG‑CGGAG‑AGAGGCTTCCTGTACGACCCACCAATCTTAAAGATTGGACAAG‑AGTAAAGATC‑TGTAA‑GGTGACG‑AACGTGTGGGTCGTTGGTTCAGTGGGTAGAGCAAGTGAATTTTAAt                                                                                            >  2:145628/1‑298 (MQ=14)                                                                                                                                                                                                      aTCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCGGCGACGGCCCGAAGGGCGAG‑CGAAG‑CGAGTCATCCTGCAc                                                                                                                                                                                                >  2:559266/1‑187 (MQ=255)                                                                                                                                                                                                           ttcatcaCCCACCACTCTTGTCGTTAGCTCAGTTGGTAGAGCAGGTGACTTTTGATCAATTGGTCGCAGGTTCGAACCCTGCACGACCCACCAGGTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCAc                                                                                                                                                                                                <  2:102706/183‑1 (MQ=21)                                                                                                                                                                                                                            gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGccc                                                                                                                                                                      <  1:290601/191‑1 (MQ=255)                                                                                                                                                                                                                             gttCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATTTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTagag                                                                                                           <  2:598891/243‑1 (MQ=255)                                                                                                                                                                                                                             ggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGGGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑CCCGTAt                                                                                                                                   <  2:89362/221‑1 (MQ=255)                                                                                                                                                                                                                             ggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACGCAGATGTTAAGCGTGAAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑CCCGTAt                                                                                                                                   <  2:244892/221‑1 (MQ=255)                                                                                                                                                                                                                                         aGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAAAATCa                                                                                                                                                                                                                                                                               >  2:434134/1‑75 (MQ=9)                                                                                                                                                                                                                                         aGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAAAATCAAACCCAGAt                                                                                                                                                                                                                                                                      >  2:434144/1‑84 (MQ=255)                                                                                                                                                                                                                                           ttGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACt                                      <  1:378856/300‑1 (MQ=255)                                                                                                                                                                                                                                            tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATATCAAAGATTGGTCCCA‑CGTACACCTCCTTACA‑A‑TAGCG‑CCCGTATTGGTCGTTGGGTCAGTTGGTAGAGTAGTTGACTTTTAATCAATTGGTCGAAGGTTCGAATCCTGCACGACCAAACAGTTTAAAGGTGGTTACt                                      >  1:453013/1‑299 (MQ=17)                                                                                                                                                                                                                                            tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGAc                                                                                                                                                                                             <  2:457071/154‑1 (MQ=14)                                                                                                                                                                                                                                                  agtagtggACTTTTAACCAAGTGTTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAATGCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTGAAAGATTGGCCCTG‑AGGAAAAATC‑TTTCA‑GGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                               <  1:246986/293‑1 (MQ=37)                                                                                                                                                                                                                                                  agcattttaCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACACCAAACTCAGATGTTAAGCGTGAAGGATAACTTTGCGCCAGCAACGGCCCTTAGGGCTAG‑CGACG‑CGATTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGGTGGCGAGAT‑‑TGTCG‑TGTGGGATCGGGGGTGGGT‑ATGAGAGACGGTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                               <  1:448888/292‑1 (MQ=12)                                                                                                                                                                                                                                                                    aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GTTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt              <  1:545056/299‑1 (MQ=255)                                                                                                                                                                                                                                                                    aaTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt              <  1:544884/299‑1 (MQ=255)                                                                                                                                                                                                                                                                               ggTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGAGGTTAAGCGTTAAGGATAACGTTGCGCCAGCAACGGCTCGTAGGTCGAG‑CGAGG‑CGGGTCGGCCTGCAAGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑AGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc  <  2:400884/300‑1 (MQ=38)                                                                                                                                                                                                                                                                               ggTTCGAATCCTGCACGACCCACCAGTTTCAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc  <  2:7234/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                aCCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGGAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATTCTGCACGACCCACCACTTTCAAAGATTGGc                                                                                                                                                                        >  2:204009/1‑121 (MQ=14)                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                          TCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCGCAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCG‑AGTAAAAATC‑TTTCA‑GGTAACA‑CCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAC  >  NC_000913/780928‑781497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.