| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,522,412 | IS1 (–) +8 bp | coding (1676‑1683/1968 nt) | yjhG ← | D‑xylonate dehydratase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 291401 | NA (NA) | 11 (1.000) | 10/310 | 0.1 | 91.2% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 4522412 = | 1 (0.100) | coding (1683/1968 nt) | yjhG | D‑xylonate dehydratase | |||||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 13 (1.180) | 9/310 | 0.2 | 92.5% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4522419 | 1 (0.100) | coding (1676/1968 nt) | yjhG | D‑xylonate dehydratase | |||||
GTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAGAATATCGCCCGCCTTGATCTTGTCATGTTTGATATCGTAAATCGCACTTTTCTCG > NC_000913/4522197‑4522661 | gTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACggtaatgactcc < 1:216707‑M2/235‑13 (MQ=255) tcatcTGGAAATTCAGGATCAGGAAGTAAATCATGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGAAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTAAggtaatgcctccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc < 1:222249‑M2/251‑71 (MQ=255) ncaTTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGATACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTAGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc < 1:23352‑M2/250‑119 (MQ=255) gcttttgccgttacgcaccaccccgtcagtacctgaaccggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAATTTACCGAt > 1:89518‑M2/125‑136 (MQ=255) cttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTc > 1:2853‑M2/124‑250 (MQ=255) gttacgcacccccccggcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaangcangaagntgncggcatcaccTAATTNACAGATGGGGCCCCCGGCCAGCGCTTCTGGCCCCACATGGCCGANNCNNNCNCCAGTAGa < 2:180938‑M2/66‑1 (MQ=255) gttacgcaccaccccgtcagtagctgaacaggagggacagatgatagacacagaagccactggagcaactcaaaaccaccatcatacactaaatcagtaagttggcagcatcaccTACTTTACAGATGGGGCATCCGGCCAGCGCTTCTGGCCCCACATGACCGATGAACGCGCCAGTAGa > 1:180938‑M2/116‑181 (MQ=255) gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagaaagttggcagcatcaccTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc > 1:92279‑M2/111‑221 (MQ=255) gTTGCCTTCTCCTGTGAAGGTAATGGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACggtaatgactccaactgattgatagtgttttatgttcagagaatgc > 1:6056‑M2/1‑118 (MQ=255) caggagggacagctgatagaaacagaagccacgggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAATTTACCGATGGGGCCTc < 1:44949‑M2/20‑1 (MQ=255) aTCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcg < 1:126607‑M2/251‑163 (MQ=255) gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTAATTTACCGATggg > 1:121916‑M2/77‑91 (MQ=255) gatagaaacagaagccactggagcacctcacaaacaccatcatacactaactcagtaggttggcagcatcaccTACTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCCCGCGCCAGTAGAAACGCCAGCGAAACGTGCATCGGTGATTAACGAAACATGCTTAACGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATc > 1:239325‑M2/74‑233 (MQ=255) cGAGGAAATTTACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcgtatatcgcttgctgattacgn > 1:23581‑M2/1‑75 (MQ=255) aaaTTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCAAATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGATTAAGGGCACTGGTAACCTGGTAGGTTTCTTCAATCCCTGTACCTGAAGGTCCAACGCCaataa > 1:1453/1‑250 (MQ=255) agccactggagcacctcaaaaacaccataatacactaaatcagtaagttggcagcatcaccTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGccc > 1:86452‑M2/62‑134 (MQ=255) cTTCGCCGTGAAGCTCGCGACAATCAATTTTAAGTTCAATTAAATCCCCGGTGCGTAATTTACggtaatgactccaacttattgatagtgttttatgttcagataaggcccgatgactttttcattcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcttcagattcagg > 1:116002‑M2/1‑63 (MQ=255) cGCCGTGAAGCTCGCGACAATCAATTTTAATTACAATTAAATCCCCGGTGCGTAATTTTCggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctcaattcgctgcctatatcgctggctgattacgtgcagctttcccttca > 1:4349‑M2/1‑60 (MQ=255) caatcaatTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACggtaatgactccaacttattgatagtgttttatgttcn > 1:166816‑M2/1‑43 (MQ=255) caatcaatTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACggtaatgactccaacttattgatagtgttttatgttca < 2:166816‑M2/81‑39 (MQ=255) acatacacaaaaccagtaagtgggaagcatcaccTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAGAATATCGCCCGCCTTGATcttn < 1:166120‑M2/217‑2 (MQ=255) gcatcaccTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGCAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTaa > 1:131516‑M2/9‑148 (MQ=255) gCGTAATTTACggtaatgactctaacttattgatagtgttttatgttcagataatgcc > 1:234998‑M2/1‑11 (MQ=255) agtAATTTACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact < 1:75031‑M2/64‑56 (MQ=255) aaTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGGGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGTTTTCTTCCATCCCGGTACCTGAAGTTCCATCGCCAATAATGACCAGAATATCGCCCGCCTTGATCTTGTCATGTTTGATATCGTAAATCGCACTTTTCTCg < 1:267965/249‑1 (MQ=255) tttACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgaganngacagc < 2:16315‑M2/96‑92 (MQ=255) | GTCCCACCACTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTATGACAGATGCTTCAGGGCACTGGTAACCTGGTAGGTTTCTTCCATCCCTGTACCTGAAGGTCCAACGCCAATAATGACCAGAATATCGCCCGCCTTGATCTTGTCATGTTTGATATCGTAAATCGCACTTTTCTCG > NC_000913/4522197‑4522661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |