| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,522,412 | IS1 (–) +8 bp | coding (1676‑1683/1968 nt) | yjhG ← | D‑xylonate dehydratase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 291401 | NA (NA) | 11 (1.000) | 10/310 | 0.1 | 91.2% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 4522412 = | 1 (0.100) | coding (1683/1968 nt) | yjhG | D‑xylonate dehydratase | |||||
| * | ? | NC_000913 | 1978503 = | NA (NA) | 13 (1.180) | 9/310 | 0.2 | 92.5% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 4522419 | 1 (0.100) | coding (1676/1968 nt) | yjhG | D‑xylonate dehydratase | |||||
TGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1978693‑1978503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCGGAACCCGTAGCGATGAACAATTACCTTCACAGGAGGAGGCAACTGCAATATTAAATGCCAGACCCAGCCATCAGGATTTACTTCCCGATCCTGAATTGCCAGATGATACCCGGCTATGGGCAATGCTTCAGGCCGTGAGTGGTGGGAC < NC_000913/4522419‑4522197 TGAAGGGAAAGCTGCACGTAATCAGCCAGCGATATAGGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAAAATTACGCACCGGGGATTTAATTGTAATTAAAATTGATTGTCGCGAGCTTCACGGCG > 1:4349/1‑251 nCGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTAAATTTCCTCG > 1:23581/2‑251 CGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCGGAACCCGTAGCGAT < 1:126607/251‑1 CCTGAATCTGAAGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGAATGAAAAAGTCATCGGGCCTTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTAAATTACGCACCGGGGATTTAATTGAACTTAAAATTGATTGTCGCGAGCTTCACGGCGAAG > 1:116002/1‑196 GCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCTAGCTTCACGGCGAAGTCAATTTCCTCGGAACCCGTATCGATGAACAATTACCTTCACAGGAGGAGGCAACTGCAATATTAAATGn < 1:23352/251‑2 GCTGTCNNTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTAAA < 2:16315/96‑1 GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGGCATTACCTTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCGGAACCCGTAGCGATGAACAATTTCCTTCACAGGAGGAGGCAACTGCAATATTAAATGCCAGACCCAGCCATCATGATTTACTTCCTGATCCTGAATTTCCAGATGA < 1:222249/251‑1 AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTAAATTACt < 1:75031/65‑2 GGCATTATCTGAACATAAAACACTATCAATAAGTTAGAGTCATTACCGTAAATTACGC > 1:234998/1‑58 GCATTCTCTGAACATAAAACACTATCAATCAGTTGGAGTCATTACCGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCGGAACCCGTAGCGATGAACCATTACCTTCACAGGAGAAGGCAAC > 1:6056/1‑164 nGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTG > 1:166816/2‑81 TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTG < 2:166816/81‑1 GGAGTCATTACCGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCGGAACCCGTAGCGATGAACAATTACCTTCACAGGAGGAGGCAACTGCAATATTAAATGCCAGACCCAGCCATCAGGATTTACTTCCCGATCCTGAATTGCCAGATGATACCCGGCTATGGGCAATGCTTCAGGCCGTGAGTGGTGGGAC < 1:216707/235‑1 TGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1978693‑1978503‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTGATTGTCGCGAGCTTCACGGCGAAGTCAATTTCCTCGGAACCCGTAGCGATGAACAATTACCTTCACAGGAGGAGGCAACTGCAATATTAAATGCCAGACCCAGCCATCAGGATTTACTTCCCGATCCTGAATTGCCAGATGATACCCGGCTATGGGCAATGCTTCAGGCCGTGAGTGGTGGGAC < NC_000913/4522419‑4522197 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |