| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 949,906 | IS2 (+) +5 bp | coding (239‑243/591 nt) | ycaK → | putative oxidoreductase YcaK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 949906 = | 0 (0.000) | 8 (0.730) | 8/310 | 0.2 | 100% | coding (239/591 nt) | ycaK | putative oxidoreductase YcaK |
| ? | NC_000913 | 1467910 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 949910 | 0 (0.000) | 11 (1.000) | 10/310 | 0.1 | 100% | coding (243/591 nt) | ycaK | putative oxidoreductase YcaK |
| ? | NC_000913 | = 1469240 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
AAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGAATAATGGGCTGGCTTATGGAGATGGGCACAAATTACCATTCAATAAAGTTCGTTGGGTGGCGCTGGTTGGAGGAGACAAAGAATCATTTG > NC_000913/949663‑950076 | aaaTTATGCAGTCTGAACGTATTTATTTGGTATGCGCACATCCTCGTCATCATTCATTGACAGCACATATTGCTGATGAGATCCATCAGAGGGCAATGCAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCACCCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAAAGTTATTCTCCAGAGGTTCATCAGCTTTATTAAGAGCTGCTTGAACATGACt > 1:240780‑M1/1‑248 (MQ=255) aCGTATTTAGTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATCCATCAGCTGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGAGAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGGCtagactggcctcctgaatc < 1:217686‑M1/251‑20 (MQ=255) agcagagagcttcgtgaaaacgataaagcctgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccgtgcagaggcgttcgagcattataacgaatggcaaccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagctggcttgttaggggttaagtgataacagatgtctgtaaatataggggcaaatccaATGACACGTTAGTGGTGGATTTTCctctc > 1:170930‑M1/223‑251 (MQ=255) cagagagcttcgtgaaaacgataaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATGACACGTTAGTGGTGGTTTTTCCTCTCtg < 1:82999‑M1/31‑1 (MQ=255) taaagcgtgactacatcagtatcatgaccaaaccagacgggttaacggccgcaaagaaccttgcagaggcgttcgagcattctaacgaatggcaaccgcatcgtgcgctgggttatcgctcgcaacgggaatatctgcggaagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATGACACGATAGAGGTGGTTTTTCCTCTCTGGAGGAACAGCTTcc < 1:232932‑M1/45‑1 (MQ=255) gATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACtagactggccccctgaatctccagacaaccaatatcacttaaataagtg < 1:4405‑M1/223‑50 (MQ=255) ggAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCCACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat > 1:140868‑M1/1‑151 (MQ=255) gttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGc < 1:205347‑M1/49‑1 (MQ=255) gACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaa > 1:21557‑M1/1‑133 (MQ=255) cgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTAc < 1:112345‑M1/38‑1 (MQ=255) cTCGATTTATAGCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGac < 1:13110/126‑1 (MQ=255) tAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGAATGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCCTCAGCTTTATTCAGAGCTGCTTGAACATGACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgtttgatgtcttagggccggagaaacgcagacggcgtaccaaacag > 1:142794‑M1/1‑109 (MQ=255) cGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagc > 1:205722‑M1/1‑89 (MQ=255) gctcgccacgggcatagctgcggcagcgggtctgtaatgggttaagtgataacagaggtctggaaatataggggcaaatccaATGACACGTGAGTTGTGGTTTTTCCTCTCTGGGGTTACAGCTTCCCCGCAATGCTAAAAGTATAGATTGATAGAGTATGGAATAATGGGCTGGCTTATg > 1:116826‑M1/83‑181 (MQ=255) ccGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACtagactggccccctgaatctccagacaaccaatatcacttaaatcagtgatagtcttaatattagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagc > 1:269911‑M1/1‑87 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgcgttaagtgatcacagatgtctggaaatataggggcaaatccaATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGAATACTGGGCTGGCTTATGGAGATGGGCACAAATTACCATTCAATAAAGTTCGTTGGGTGGCGCTGGTTGGAGGAGACAAAGAATCAttt < 1:236493‑M1/170‑1 (MQ=255) ggAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaacgatcgcaattgttcagcagagc > 1:141919‑M1/1‑85 (MQ=255) tctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaagccaATGACACGTTAGTGGTGTTTTTTCCGCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGAATAATGGGCTGGCTTAGGGAGATGGGCACAAATTACCATTCAATAAAGGTCGTTGGGTGGCCCTGGTTggagg > 1:84715‑M1/67‑220 (MQ=255) ncaGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACtagactggccccctgaatctccagacaaccaat > 1:78596‑M1/2‑42 (MQ=255) ctgtattCAGAGCTGCGTGAACATGACtacacgggcccccgtaatctccatacaaccaatatcacgtaaataagtgatagtcttaatactagggtttagactagtcattggagaacagatgattgatgtcttag < 1:270729‑M1/131‑108 (MQ=255) | AAATTATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGAATAATGGGCTGGCTTATGGAGATGGGCACAAATTACCATTCAATAAAGTTCGTTGGGTGGCGCTGGTTGGAGGAGACAAAGAATCATTTG > NC_000913/949663‑950076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |