New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2653419	54 (0.770)	4 (0.060)	3/540	4.8	6.9%	noncoding (37/100 nt)	timR	putative small regulatory RNA TimR
	?	NC_000913	2653746 =	59 (0.920)					intergenic (‑291/‑109)	timR/ryfA	putative small regulatory RNA TimR/small regulatory RNA RyfA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAAACGACCGATGAACTGGATGCGATATTTTTTGGTCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCAGACAAATATAAATAAATCCTGCTCAAAATTAAAAATTCTAACCGGTAAAAGATATTACTTAAACATGTAAATTCACTTTCCTTTAAAAAACAAAAAACCGCCAAAATCAGGCGGTTTTTTGTTGCTGGT  >  NC_000913/2653133‑2653718                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                                 aaaaCGACCGATGAACTGGATGCGATATTTTTTGGTCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACAt                                                                                                                                                                                                                                                                                                   <  2:352136/300‑1 (MQ=255)          gATGAACTGGATGCGATATTTTTTGGTCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGc                                                                                                                                                                                                                                                                                        <  1:35857/300‑1 (MQ=255)                 tGGATTCGATGTTTTTTGTTCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCAGGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCATTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGc                                                                                                                                                                                                                                                                                  <  2:114068/299‑1 (MQ=255)                     tGCGATATTTTTTGGTCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTcac                                                                                                                                                                                                                                                                             <  1:306083/300‑1 (MQ=255)                        gATATTTTTTGGTCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTCTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGc                                                                                                                                                                                                                                                                          <  2:478898/300‑1 (MQ=255)                                  ggTCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATAc                                                                                                                                                                                                                                                                <  1:414137/300‑1 (MQ=255)                                    tCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTc                                                                                                                                                                                                                                                              <  1:546570/300‑1 (MQ=255)                                              aGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTNGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAAct                                                                                                                                                                                                                                                    >  1:106546/1‑300 (MQ=255)                                              aGCTACGACAAACCAANTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGNAGGTGCTTCACAGCAAAANAATACTCACCAGTAAct                                                                                                                                                                                                                                                    >  1:469502/1‑300 (MQ=255)                                                       aaaCCAATTATCGTCAGCTGCGGCTCTTGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACATGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATAc                                                                                                                                                                                                                                                                <  2:62174/279‑1 (MQ=255)                                                          ccAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCa                                                                                                                                                                                                                                        >  1:35/1‑300 (MQ=255)                                                                        cTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTCTTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAAAGCAGGTGCTTCACAGCCAAACAATACTAGCCAGTAACTCTATTTTTGTCAAGCAAAagagaata                                                                                                                                                                                                                          >  2:272953/1‑297 (MQ=255)                                                                        cTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTAAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAAGACTCACCAGTAACTCTCTTTTTGTCAAGCAACAGAGGGTa                                                                                                                                                                                                                          >  2:273131/1‑300 (MQ=255)                                                                             gCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTATGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGGAattat                                                                                                                                                                                                                     >  1:429846/1‑300 (MQ=255)                                                                                  ggTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACCTGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCACGCAAAAGAGAGTAATTATTGttt                                                                                                                                                                                                                >  1:379441/1‑300 (MQ=255)                                                                                  ggTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACACGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTATAAAGAAAAAGAGAGTagttgctgttt                                                                                                                                                                                                                >  2:196411/1‑290 (MQ=255)                                                                                   gtgtAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAATGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGttta                                                                                                                                                                                                               >  2:84784/1‑300 (MQ=255)                                                                                   gtgtAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACACTACTCACCAGTAACTCTCTTTTTGTCAAGAAAAAGAGAGTAATTATTGttt                                                                                                                                                                                                                >  2:204606/1‑299 (MQ=255)                                                                                   gtgtAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAGTTATTGttta                                                                                                                                                                                                               >  2:204840/1‑300 (MQ=255)                                                                                   gtgtAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTATCTTTTTGTCAAGCAAAAGAGAGTAATTATTGttt                                                                                                                                                                                                                >  2:204737/1‑299 (MQ=255)                                                                                                  tGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCg                                                                                                                                                                                               <  1:33530/300‑1 (MQ=255)                                                                                                    gTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCATTTCCAGCAGGTTG‑‑ACTTGCGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTc                                                                                                                                                                                                                                         >  1:367284/1‑257 (MQ=255)                                                                                                       ttGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTCCAAAGCAAAACAATACTCACCAGTAACTCTCTTTTTTTCACGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTGTCGAAAcc                                                                                                                                                                                          >  2:479532/1‑300 (MQ=255)                                                                                                                 tCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGTAGTGAATTGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTcc                                                                                                                                                                                <  2:151321/300‑1 (MQ=255)                                                                                                                   gcgACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTccgc                                                                                                                                                                              <  1:478219/300‑1 (MQ=255)                                                                                                                      aCGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCgt                                                                                                                                                                           >  1:323863/1‑300 (MQ=255)                                                                                                                      aCGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCAGCCCTTTCCGCCgt                                                                                                                                                                           >  2:122166/1‑300 (MQ=255)                                                                                                                          tGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATNTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTc                                                                                                                                                                       <  2:444443/300‑1 (MQ=255)                                                                                                                           ggATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTc                                                                                                                                                                       >  1:456690/1‑299 (MQ=255)                                                                                                                                      aCGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGNCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTaataaaata                                                                                                                                                           >  1:404635/1‑300 (MQ=255)                                                                                                                                              cTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCATCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCt                                                                                                                                                   >  1:484407/1‑300 (MQ=255)                                                                                                                                              cTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCt                                                                                                                                                   >  1:219722/1‑300 (MQ=255)                                                                                                                                                gTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCtta                                                                                                                                                 >  1:131813/1‑300 (MQ=255)                                                                                                                                                     acgGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACTGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCttatta                                                                                                                                              <  2:358568/298‑1 (MQ=255)                                                                                                                                                         cgcATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGa                                                                                                                                        >  1:288948/1‑300 (MQ=255)                                                                                                                                                               gcgTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTAAATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCACTTTACGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGCATTCa                                                                                                                                   >  2:132194/3‑299 (MQ=255)                                                                                                                                                                aGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAGGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCACTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCa                                                                                                                                   >  2:70758/1‑298 (MQ=255)                                                                                                                                                                aGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTATGGTTCGCGGCCTTTCCAGCAGGTTG‑‑CCTTGCGTTACATGG‑‑GCAACGCAGGTGCCTCAAAGCAAACCCATACTCACCAGTACCTTTCTTTTTATCAAGCGAAAGAGAGTAATTATTGTTTATTTCGCGT‑ATTATCGACAACGGCCCTTTCCGCCGTGTCCGGTACGAAAATAACCTGGCTTGTTAGCCCGCACTCAGa                                                                                                                                 >  2:115610/1‑300 (MQ=255)                                                                                                                                                                 gTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAGTTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGCATTCAGAc                                                                                                                                >  1:296963/1‑300 (MQ=255)                                                                                                                                                                 gTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCAGAc                                                                                                                                >  1:205107/1‑300 (MQ=255)                                                                                                                                                                 gTGAATGGGACGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACACTACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTGTCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCCTCTTAGTCCGAATTCAGAc                                                                                                                                >  1:205217/1‑300 (MQ=255)                                                                                                                                                                        gggCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCAGACAAAtata                                                                                                                         >  2:520684/1‑300 (MQ=255)                                                                                                                                                                                                      aGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCAGACAAATATAAATAAATCCTGCTCAAAATTAAAAATTCTa                                                                                           >  1:479721/1‑300 (MQ=255)                                                                                                                                                                                                                    tttACAGGCAAGAAAAAACCTCCAAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCTGCCTTTCCAGGAGGTTGCTACTTGTGTTACATGACCGCAACGCAGTTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGTCGTTATCGACACCGGCCCTTTCCGCCGTGTTCGGt                                                                                                                                                                    <  2:183920/218‑1 (MQ=255)                                                                                                                                                                                                                            cAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCAGACAAATATAAATAAATCCTGCTCAAAATTAAAAATTCTAACCGGTAGAAGATATTACTTa                                                                      >  2:523552/1‑299 (MQ=255)                                                                                                                                                                                                                              aTAAAAAACCGCCGAATTTGTCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTNGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCAGACAAATATAAATAAATCCTGCTCAAAATTAAAAATTCTAACCGGTAAAAGATATTACTTAAAc                                                                   <  2:410762/300‑1 (MQ=255)                                                                                                                                                                                                                                        tccgAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCAGACAAATATAAATAAATCCTGCTCAAAATTAAAAATTCTAACCGGTAAAAGATATTACTTAAACATGTAAATTc                                                         <  2:463053/299‑1 (MQ=255)                                                                                                                                                                                                                                                             ttGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAGCTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTCTTTAGCGT‑ATTATCGACAACGGCCCTTTCCGCCGTGTCCAGTAAGAAAATAACCTGGCTTACTAGTCCGAATTCAGCCAAATATAAATAAATCCTGCTCCAAATTCAAACATCTAACCGGTAAAAGATAGTAATTCAACATGtcacctcactccaattcaacaaaaaaac                                    >  2:315841/1‑273 (MQ=255)                                                                                                                                                                                                                                                             ttGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCAGACAAATATAAATAAATCCTGCTCAAAATTAAAAATTCTAACCGGTAAAAGATATTACTTAAACATGTAAATTCACTTTCCTTTaaaaaataaca                                    >  2:315836/1‑295 (MQ=255)                                                                                                                                                                                                                                                                                 cTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCCAAAGAGAGTAATTATTGTTTATTTAGCGT‑ACTATCGACACCGGCCCTTTCCGCCGTGTTTGGTAATAAAATAACCTGGCTTATTAGTCCGGATTCAGACAAATATAAATAAATCCTGCTCAAAATTAGAAATTCTAACCGGTAAAAGATATTACTTAAACATGTAAATTCACTTTCCTTTAAACAACAAAAGAACGCCGAAGTCAGGc                   >  2:126276/1‑297 (MQ=255)                                                                                                                                                                                                                                                                                 cTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTCTTGTTTATTTAGCGT‑ATTATCGACAACGTCCCTTTCCGCCGTGTTCGGTAATAAAATACCCTGGCTTATTAGTCCGAATTCAGACAAATATAAATAAATCCTGCTAAAAATTAAAAATTCTAACCGTTAAAAGATATTACTTAAACATGTAGATTCACTCTCCTTTacaaaaccgcaatccgccgcaat                        >  2:126350/1‑276 (MQ=255)                                                                                                                                                                                                                                                                                 cTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGtttattcatgtcct                                                                                                                                                                                                     >  2:324383/1‑112 (MQ=255)                                                                                                                                                                                                                                                                                 cTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCAGACAAATATAAATAAATCCTGCTCAAAATTAAAAATTCTAACCGGTAAAAGATATTACTTAAACATGTAAATTCACTTTCCTTTAAAAAACAAAAAACCGCAAAAATCAGGCGGt                >  1:435607/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                               g‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCAGACAAATATAAATAAATCCTGCTCAAAATTAAAAATTCTAACCGGTAAAAGATATTACTTAAACATGTAAATTCACTTTCCTTTAAAAAACAAAAAACCGCCAAAATCAGGCGGTTTTTTGTTGCTGGt  >  1:198453/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                                 AAAACGACCGATGAACTGGATGCGATATTTTTTGGTCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAAGTATTTTACAGGCAATAAAAAACCGCCGAATTTGGCGGTTTTTTATTGCTAGTCTGGTTCGCGGCCTTTCCAGCAGGTTG‑‑ACTTGTGTTACATGA‑‑GCAACGCAGGTGCTTCACAGCAAAACAATACTCACCAGTAACTCTCTTTTTGTCAAGCAAAAGAGAGTAATTATTGTTTATTTAGCGT‑ATTATCGACACCGGCCCTTTCCGCCGTGTTCGGTAATAAAATAACCTGGCTTATTAGTCCGAATTCAGACAAATATAAATAAATCCTGCTCAAAATTAAAAATTCTAACCGGTAAAAGATATTACTTAAACATGTAAATTCACTTTCCTTTAAAAAACAAAAAACCGCCAAAATCAGGCGGTTTTTTGTTGCTGGT  >  NC_000913/2653133‑2653718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.