New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2817942	69 (0.780)	6 (0.070)	6/548	6.2	9.2%	intergenic (‑82/+117)	argQ/argZ	tRNA‑Arg/tRNA‑Arg
	?	NC_000913	2818492 =	54 (0.650)					noncoding (58/77 nt)	argV	tRNA‑Arg
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGTTTGCACACTTCACGTTCAA  >  NC_000913/2818214‑2818779                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                         aTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCCTACCTTCATCGCTGAA‑AGTCCGTAGAATATGGTGCATCTGGGAGGATCCGAACCTCCGACCGCTCGGt                                                                                                                                                                                                                                                                                       >  1:117205/1‑298 (MQ=255) aTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTc                                                                                                                                                                                                                                                                                     >  1:117588/1‑300 (MQ=255)      aaCCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGc                                                                                                                                                                                                                                                                                <  1:525873/300‑1 (MQ=255)       aCCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTCCTTTACTGCCGGTTTTTTGATACCGCTACTAAAGCCGTACCAAGTAAGAGCTGGTGCATCAGGGAGGCTTACTAGCCTTGAGGCTAGCACTTAGGGCCGTTGCTAAAGCAACGTTATCCTACCTGGTGCCTGCG‑‑GTTATTANCACCACCTCTTCCATACCTTAATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACTGCt                                                                                                                                                                                                                                                                                           >  2:541589/1‑288 (MQ=18)                      gTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGCTTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGCAACTCCGACCGCTCGGTTCGTAGCCGAGCACTCTATCCa                                                                                                                                                                                                                                                                 >  2:259176/1‑299 (MQ=255)                      gTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGACTTTTTGATACCGCTACTAAAGCCGCATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTAGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTATTACATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGCTTCGaaaccacaaccgcccggtttgt                                                                                                                                                                                                                                                                                   >  2:245445/1‑261 (MQ=18)                          gTAGCTGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCAACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTg                                                                                                                                                                                                                                                             <  1:206428/299‑1 (MQ=255)                                gAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTAc                                                                                                                                                                                                                                                       <  1:541589/299‑1 (MQ=255)                                    aCTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGCGTACTCTATCCAGCTGAGCTACGGAt                                                                                                                                                                                                                                                   >  2:613543/1‑299 (MQ=255)                                    aCTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGc                                                                                                                                                                                                                                                          <  1:21172/292‑1 (MQ=255)                                    aCTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGAt                                                                                                                                                                                                                                                   >  2:433868/1‑299 (MQ=255)                                    aCTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCAGAGTACTCTATCCAGCTGAGc                                                                                                                                                                                                                                                          >  2:21172/1‑292 (MQ=255)                                         aTCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCaaa                                                                                                                                                                                                                                              >  2:671705/1‑299 (MQ=255)                                         aTCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCATTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAAt                                                                                                                                                                                                                                             >  1:357386/1‑300 (MQ=255)                                         aTCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTAATAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGCGCTACTGATGCaca                                                                                                                                                                                                                                              >  2:671695/1‑297 (MQ=255)                                                 gAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCCAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTAACGCCACCTCTTCCATATCTTCATCGCTGAA‑AGTACGCAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGa                                                                                                                                                                                                                                     >  2:195307/1‑300 (MQ=255)                                                   gCTACGGATGCATCGTGAAACTTACTCTACTACAGAGTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGATGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCTTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGGAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAgg                                                                                                                                                                                                                                   <  2:93677/300‑1 (MQ=255)                                                                                 tGCAGAGTTTTTAATACCCCTACTAAAGCCATATCAAGTAAGANATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCgg                                                                                                                                                                                                                                        <  1:142839/265‑1 (MQ=255)                                                                                         tattGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCTGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATcc                                                                                                                                                                                                                                                                  <  2:294811/229‑1 (MQ=255)                                                                                                    ctactaAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCTTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGc                                                                                                                                                                                                                                                          <  2:299872/228‑1 (MQ=255)                                                                                                     gagaggggtataagagacggagagATGGTGCGTCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTNATCCTCCCTAGTGCCTGCG‑‑GTTAATACCGCCACCTCTTCTATACCTTCATCGCTGAA‑AGTACTTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGc                                                                                                                                                                                  <  2:536730/278‑1 (MQ=18)                                                                                                                 aTCAAGGAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCTTGGTGCCGGCG‑‑GTTATTACCGCCACTTCTGCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTActc                                                                                                                                                                                                                                                                       <  2:379621/202‑1 (MQ=255)                                                                                                                     aGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCTTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGc                                                                                                                                                                 <  1:366587/299‑1 (MQ=255)                                                                                                                      gTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGCGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCAGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCATTCAGCct                                                                                                                                                               >  2:100725/1‑300 (MQ=255)                                                                                                                                gTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCAcc                                                                                                                                                     >  1:474940/1‑300 (MQ=255)                                                                                                                                            ggaTTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGANGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGcc                                                                                                                                         >  2:540028/1‑300 (MQ=255)                                                                                                                                                                                      gCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTATCGGCCACCTCAACACACGCATATTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCAtcgtc                                                                                        >  2:382777/1‑299 (MQ=255)                                                                                                                                                                                         aCGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGGACTTGTTT‑‑ATCGCTCATCGTCGCt                                                                                     >  2:405239/1‑299 (MQ=255)                                                                                                                                                                                         aCGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCt                                                                                     >  1:69223/1‑299 (MQ=255)                                                                                                                                                                                            ttATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCTGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGt                                                                                 <  1:525258/300‑1 (MQ=255)                                                                                                                                                                                            ttATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGt                                                                                 <  1:525018/300‑1 (MQ=255)                                                                                                                                                                                              aTCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGt                                                                                 >  1:372258/1‑298 (MQ=255)                                                                                                                                                                                                  tccatGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATCCTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCAACACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGca                                                                           >  2:322255/5‑300 (MQ=255)                                                                                                                                                                                                  tccatGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCATTAGCAGGGGAGCGCCTTCAGCCTCTAGGCCACATCACCACACGCCTATTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGca                                                                           >  2:167185/5‑300 (MQ=255)                                                                                                                                                                                                  tccCTGGTGCCTGCGGNGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGCCAGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTATGGG‑‑AGTGCNCTTCGAAGAACTTGTTTANATCGCTCATcgccgcgc                                                                                    >  1:573573/1‑298 (MQ=37)                                                                                                                                                                                                  tccCTGGTGCCTGCGGNGTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGCCAGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑GGGGAGTGCNCTTCGAAGAACTTGTTTGNATCGCTCAtcgcggcgc                                                                                    >  1:573571/1‑294 (MQ=37)                                                                                                                                                                                                  tccCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGca                                                                           >  1:480209/1‑300 (MQ=255)                                                                                                                                                                                                  tccCTAGTGCCTGCG‑‑GTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGTAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCa                                                                                                                                                                                 <  2:547752/207‑1 (MQ=14)                                                                                                                                                                                                  tccCTAGTGCCTGCG‑‑GTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCa                                                                                                                                                                                 >  1:547752/1‑207 (MQ=14)                                                                                                                                                                                                   cccTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGcac                                                                          >  2:567449/1‑300 (MQ=255)                                                                                                                                                                                                     cTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGc                                                                                                                                                                                  <  2:255008/202‑1 (MQ=255)                                                                                                                                                                                                     cTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGc                                                                                                                                                                                  >  1:255008/1‑202 (MQ=255)                                                                                                                                                                                                                g‑‑gTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCt                                                              >  1:440994/1‑299 (MQ=255)                                                                                                                                                                                                                      attaCCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGAc                                                         >  1:551412/1‑300 (MQ=255)                                                                                                                                                                                                                               aCCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGt                                                 <  1:154316/299‑1 (MQ=255)                                                                                                                                                                                                                                 ctctTCGATACCTTCATTGCTGAAGATTTCGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTAc                                                                   <  1:558083/280‑1 (MQ=255)                                                                                                                                                                                                                                 ctctTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTAc                                                                   >  2:558083/1‑280 (MQ=255)                                                                                                                                                                                                                                        aTACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAAttt                                       >  1:19962/1‑300 (MQ=255)                                                                                                                                                                                                                                             ttCATCGTTGAG‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGcc                                                                                                                                                                <  2:50936/182‑1 (MQ=255)                                                                                                                                                                                                                                              tcctttcttaaaatttcGTAGAATATGGTACATCCGGGAGGATTCGAACCTCCGACCGCTCGCTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCGAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCa                                                                                                                                                                                 <  2:606025/149‑1 (MQ=21)                                                                                                                                                                                                                                                atagCTGAA‑AGGACTGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTATATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑Ag                                                                                                                            <  1:347559/208‑1 (MQ=255)                                                                                                                                                                                                                                                        agattgcggaGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑Ag                                                                                                                            <  1:619894/195‑1 (MQ=255)                                                                                                                                                                                                                                                             aCGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGNACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGttt                   >  2:538069/1‑300 (MQ=255)                                                                                                                                                                                                                                                                 aagagatGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGAGGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTTACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGGG‑‑CTTCGAAGAACGTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTTAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGTTTacac               <  1:641353/295‑1 (MQ=255)                                                                                                                                                                                                                                                                  gAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTCTAAGTCAAACAATTTTTCCTACACTTTTATCGTTTGcaca              >  1:471581/1‑300 (MQ=255)                                                                                                                                                                                                                                                                       tGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCATTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGTTTGCACACTTCa         >  1:217291/1‑300 (MQ=255)                                                                                                                                                                                                                                                                          tGCATCCTGGAGGATTCGAACCTTCGACCGCTCGGTGCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAACGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTGCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACGTATAAGTCAAACAATTTTTCCTACACTTTTATCGTTTGCACACTTCACg       <  2:38708/299‑1 (MQ=255)                                                                                                                                                                                                                                                                             aTCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGTTTGCACACTTCACGTTCa   >  1:522279/1‑300 (MQ=255)                                                                                                                                                                                                                                                                              tCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGTTTGCACACTTCACGTTCaa  >  1:624419/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                         ATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCCTCCCTGGTGCCTGCG‑‑GTTATTACCGCCACCTCTTCCATACCTTCATCGCTGAA‑AGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATTCGAACCCCGGATGC‑AGCTTTTGACCGCATACTCCCTTAGCAGGGGAGCGCCTTCAGCCTCTCGGCCACCTCACCACACGCCTCTTA‑‑CG‑‑AGTG‑‑CTTCGAAGAACTTGTTT‑‑ATCGCTCATCGTCGCTGCGTGGCGCACATATTACTTTCTGAGACTTATAAGTCAAACAATTTTTCCTACACTTTTATCGTTTGCACACTTCACGTTCAA  >  NC_000913/2818214‑2818779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.