New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781222	44 (0.490)	4 (0.060)	4/446	6.8	10.8%	noncoding (76/76 nt)	lysY	tRNA‑Lys
	?	NC_000913	781653 =	33 (0.500)					intergenic (+1/‑432)	lysQ/nadA	tRNA‑Lys/quinolinate synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCAC  >  NC_000913/781354‑781950                                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                                           agttAACACCCGTATGGGTCGTTAGCTCATTTGTTATAGCAGTTGACTTTTGATCGATTGGGCGCAGGTTAGAATCCTGCACGACCCACCAAGTTAAAGGTGGTTACTGGGAGAGAACGTGAAGGATAACTTTGTTTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCATCATCTGGAATGAGGAAGTCAGCATAATCCCGCAAT‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCaa                                                                                                                                                                                                                                                                                                            <  1:571733/297‑1 (MQ=25) aggtaccactcgtggggtgcgtgaGCTCAGTTGTTAGAGTAGGTGACTTTTAATCAATTGTTCGCGGGTTCGAATCGTGCACGACCCACCACTCTAAATGTGGTTACTGGGAGAGAACGTGAAGGATAACGTNGCGGTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAACCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCaa                                                                                                                                                                                                                                                                                                            <  2:157466/277‑1 (MQ=37)                      ttAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAgg                                                                                                                                                                                                                                                                                       <  1:583444/300‑1 (MQ=255)                              gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttttt                                                                                                                                                                                                                                                                               >  1:346788/1‑300 (MQ=255)                                                           tGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGTTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTACACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAc                                                                                                                                                                                                                                                  <  1:529804/300‑1 (MQ=255)                                                             gTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAAGTGGTTACTGGTAGAGACTGTGAAAGATAACGTTGCGTTAGCAACGGCCCTAGGGGCGCGATGAAGTCGAGTCATCTTGCACGACCAACCACCCTAAATGATTAAGGCAACATAATCCCTAACG‑AGGTCGTTAGCTCAGTTGGTAGCACAGTTAACTTTTACTCACTTGGTCACAGGTTCGACTCCTGCAAGACCAACCAATGCAAAAAAGAGCAATAAAGGCGCTATTTTGTTATTTGCGAtgataagagatttgaaact                                                                                                                                                                                                                                                >  2:42133/1‑282 (MQ=255)                                                                   ggTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGCATCCTGCACGACCCACCAATGTAAAAAAGCGCACTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTgcagca                                                                                                                                                                                                                                          >  1:570497/1‑300 (MQ=255)                                                                     ttCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAgg                                                                                                                                                                                                                                        >  1:227290/1‑300 (MQ=255)                                                                             cTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTttgagtt                                                                                                                                                                                                                                >  1:283482/1‑300 (MQ=255)                                                                                    aCCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCa                                                                                                                                                                                                                         >  1:557867/1‑300 (MQ=255)                                                                                                   ggtggtTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGc                                                                                                                                                                                                          <  2:547775/300‑1 (MQ=255)                                                                                                        ggaCTGGGAGAGAACGGGAAAGATAACGTTGCACTAGGAACGGCCCGGATGGCGAGAGGAAGTTAAGTCATCCTGCACGACCCACTGTCCTAGATGAGTAAGGCAGCATAACCCCG‑AAGTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTc                                                                                                                                                                                                     <  2:263319/298‑1 (MQ=14)                                                                                                                    aaCGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAANAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGcc                                                                                                                                                                                         >  1:493594/1‑300 (MQ=255)                                                                                                                       gTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGa                                                                                                                                                                                      >  1:552298/1‑300 (MQ=255)                                                                                                                           gggagaaCGTTGCGGTAGCAACGGCCCGAAGGTCTAGACGAAGGCGAGTCATCCTGCACGGCCCGCTGTCCGTAATGATTAATGCAACACAACCCCGCAAT‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGTGACGGCCCGAAggg                                                                                                                                                                                  <  1:275463/295‑1 (MQ=14)                                                                                                                           aGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCTAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTNGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAggg                                                                                                                                                                                  <  1:521198/300‑1 (MQ=255)                                                                                                                           aGGATAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACTAAGTCGAGTCATCCTGCACGACCCGCCATCCTGAATGATTAAGGCATCGTAATCCCTCAAT‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAggg                                                                                                                                                                                  <  1:163432/300‑1 (MQ=18)                                                                                                                            ggATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCNCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGgc                                                                                                                                                                                 >  1:518612/1‑300 (MQ=255)                                                                                                                                      gCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGCGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATACTCCCGCAAG‑GGGTCGTTAGCTCAATTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAAGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAAAGGAGCCGCTCGCGGCGACGGCACGAAGGGCGagcgaagcg                                                                                                                                                                       >  1:9648/1‑300 (MQ=255)                                                                                                                                              aaCGGCCCGAAGTGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTGAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGATTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATcc                                                                                                                                                              <  1:246385/300‑1 (MQ=255)                                                                                                                                                   cccGAAGGGCTAGACGAGGTCAAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGTAGCATAATCTCGCAAG‑GGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCAc                                                                                                                                                         <  1:7272/300‑1 (MQ=255)                                                                                                                                                              agaCGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTGGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAAt                                                                                                                                              >  2:673411/1‑300 (MQ=255)                                                                                                                                                                        gAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGACTCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAACTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGCAGCGAGT‑CATCCTGCACGACCCCCCAATGCAGAAAAgc                                                                                                                                    >  1:131689/1‑300 (MQ=255)                                                                                                                                                                        gAGTCATCCTGCACGACCCACCATCCTGAACGATTAAGGCAGCATAATCCAGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGCTACTCAAAGATTCGCACCTGCAGCAGGTTTAAGTTGAGTGTAGCGAAACAACGGAGCCGCTCGTGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATTCTGCACGAGCAACCAATGTacacaaga                                                                                                                                    >  2:137655/1‑293 (MQ=17)                                                                                                                                                                             aTCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAGAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCt                                                                                                                               >  1:77641/1‑300 (MQ=255)                                                                                                                                                                             aTCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGATTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCACGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGAACAACCAATGTAAAAAAacgcaac                                                                                                                               >  2:226743/1‑297 (MQ=255)                                                                                                                                                                             aTCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAACAAG‑GGGTCCTTAGCTCAGTTGGTAGAGCAGTTGACTTTTACTCACTTGGTTGCAGGTTCGAATCCTGCACGACCCACCAATGTAACAAAGCGCCCTAAAGGCGCTTTTTTGCCATCTGCGGTACTCAAAGATTCGCACCTGCACCAGGTTTGAGTTGAGCGCAGCGGCACCCCCGCGCCACTCGCGGCGAAGGCCCGAATAGCGAGCGACGCGAGT‑CCTAATGCCCGACCAAGCAATGTAAAAAGGCGccat                                                                                                                               >  2:88315/1‑298 (MQ=12)                                                                                                                                                                                cTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCAGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGTGCAGTGAAACAACGGAGCCGCTCTCTGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATATCAAAAAGCGcccgaac                                                                                                                            >  2:61251/1‑296 (MQ=17)                                                                                                                                                                                       aCCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTCTCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCCGCGAAACAACGGAGCCGCTCGGGGCGAAGGCCCGAAGGGCGAGCGAAGCGCGT‑CATCCTGCACGCACAACCAATGTAAAAAAGCGCCCTAAAGGGGCtc                                                                                                                     >  2:437054/1‑299 (MQ=14)                                                                                                                                                                                         ccaccaTCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCACTAAAGGCGCtttt                                                                                                                   >  1:113734/1‑300 (MQ=255)                                                                                                                                                                                          caccaTCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAANCGCCCTAAAGGCGCTTTTTTGCTATCNGCGATACTCAAAGATTCGAACCTGCAGCAGATTTGAGTTGAGCGCAGCAACACAACGGAGCCGCTCGTGGCGCCGGCCCAAAGGGCGAGCGAAGCGAGT‑CATCCTGCATGACTCACCAATGTAACGAAGCGCCCTAACGGTGCttttt                                                                                                                  >  2:479117/1‑300 (MQ=14)                                                                                                                                                                                                       gATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCNCTTTTTTGCTATCTGCGATACTCGAANATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCa                                                                                                     >  2:471279/1‑300 (MQ=255)                                                                                                                                                                                                       gATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCAACAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCa                                                                                                     >  1:227584/1‑300 (MQ=255)                                                                                                                                                                                                                               tcgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAAcc                                                                              <  2:635727/298‑1 (MQ=255)                                                                                                                                                                                                                               agtggTCGTTAGCTCAGTTGTTAGAGCACTCGACTTTTAATCAAGTGGTCGCAGGTTCGAATCCTGCACGACCCACAAATTTAAAAAAGCGCACTAAAGGCGCTGTTTTACTATCTGCGATACTCAAAGACTCGAACCTGCAGCAGGTTGGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCTCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAAcc                                                                              <  1:109453/297‑1 (MQ=14)                                                                                                                                                                                                                                              aGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACTAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTCAACCTGATGACATCGTCag                                                               >  1:427856/1‑300 (MQ=255)                                                                                                                                                                                                                                                 tGGTAGCGCGGTTGACTTTTAATCAATTGGTCGCAGGTTCGGATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAATGCGCTTTTTTGCTATCTTCTATACTCAAAGATTCGAACCTGCAGCAGGTTGGAGGGGAGCGCAGCGAAGTAAAGAAAATGCTCGCGGAGGCGGAAAGAAGGGTAAGCGACATG‑GTGCATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGc                                                            <  1:179863/300‑1 (MQ=17)                                                                                                                                                                                                                                                 tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAACCCTGATGACATCGTCAGAGc                                                            >  1:257711/1‑300 (MQ=255)                                                                                                                                                                                                                                                  ggTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCt                                                           >  1:271745/1‑300 (MQ=255)                                                                                                                                                                                                                                                       atcAGTTGACTTTTAATCAATTGGTCGCAGTTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAATGCGCTTTTTTGCTATCTGCGATATTCAAAGATTCNAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAAAGGAGCAGCTCGCGGCGACGGCTCGGAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACtg                                                      <  1:494398/298‑1 (MQ=17)                                                                                                                                                                                                                                                          ggtccactcttactcacttGGCCGCAGGTGCGAATCCTGCACGATCCACCAATGTAACAAATTGCCCTAAATGCTCTTTTTTGCTATCTTCGATGCTCAAAGATTCGAACCTGCAACAGTTCTTATTTGAGTTAAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgc                                                   <  2:233335/283‑1 (MQ=17)                                                                                                                                                                                                                                                           gTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTgca                                                  >  2:691170/1‑300 (MQ=255)                                                                                                                                                                                                                                                                        cagtcggtagcagttctgcgtCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAATGCGCTTTTTTGATATCTGCGATACGCAAAGATTCGAACCTGCAGCAGTTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGGAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGt                                     <  2:348271/280‑1 (MQ=18)                                                                                                                                                                                                                                                                         acttgttCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGTTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTc                                    <  1:426323/294‑1 (MQ=255)                                                                                                                                                                                                                                                                                      ttCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTTAGGTATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCCAAGCTTACTGTGCAAGCAACCCTATGTCGGTGGAATTAgga                       >  2:218368/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                      ttCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGc                       >  1:284606/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                      ttCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCACTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCACCTATATGTCGGTGGAATTAGGc                       >  1:296383/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                      ttCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCAACCCATGTAAAAAAGCGCCCTAAAGGAGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGc                       >  2:217957/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                              cTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATg               >  1:315409/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                              cTGCACGACCCACCAATGTAAAAAAGCGCCCNAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCNACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATg               >  2:502259/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                   cGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCa          >  1:456313/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                     gacaaccaATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGAGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGAGCTTTTTTGCTATTCAGGCATCCCCAATTTCACTTTGTAAACCTGATGACATCGTAAGAGTTTACTGTGCAAGCAACCCTACGTCGGTGGAATTAGGAGTAAAATGACGAATc        >  2:312905/5‑300 (MQ=18)                                                                                                                                                                                                                                                                                                     aCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATc        >  1:308189/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                     aCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGAGTAAAATGACGCATc        >  2:548082/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                     aCCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGAACCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATc        >  1:257048/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                      cccACCAATGTAAAAAAGCGCCCTAAATGCGTTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATcc       <  2:372207/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                           caATTTAAAACAGCTCCCTAAATGCGCTTTTTTGCTATCTGCGATACTCAAAGATGCAAACCTGCAGTATTTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGcac  <  1:233670/300‑1 (MQ=21)                                                                                                                                                                                                                                                                                                           caATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGcac  <  1:416852/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                                           AGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAG‑GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAACCTGCAGCAGGTTTGAGTTGAGCGCAGCGAAACAACGGAGCCGCTCGCGGCGACGGCCCGAAGGGCGAGCGAAGCGAGT‑CATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACATCGTCAGAGCTTACTGTGCAAGCAACTCTATGTCGGTGGAATTAGGCGTAAAATGACGCATCCTGCAC  >  NC_000913/781354‑781950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.