New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781222	44 (0.490)	4 (0.060)	4/446	6.8	10.8%	noncoding (76/76 nt)	lysY	tRNA‑Lys
	?	NC_000913	781653 =	33 (0.500)					intergenic (+1/‑432)	lysQ/nadA	tRNA‑Lys/quinolinate synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  NC_000913/780924‑781514                                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                     aaCATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAg                                                                                                                                                                                                                                                                                                     <  1:246686/300‑1 (MQ=255)   aggtggaagcggtagtaaaacGTGAAGGATAACGTTGCATGAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCATCACGAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CAGTGTTGGGTGATTAGCTCAGCTGGGAGAGCACCTTCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAACCCTGCACGACCCACCAg                                                                                                                                                                                                                                                                                                     <  1:177192/280‑1 (MQ=14)                tGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTCATAACGGTTAGTTCGGTAGAAGTAGTTTGTAGTATCCCGCTTCA‑TATCGTGTTATTCTCTTATCTGGACAAGTACCTCCCTTACCAGGAGGGGGTAGGCGGTTCGATCTCGTCATCACCCACCACTCGGGTAGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTAGCAGGTTGGAATCCTGCACGACCAACCAAATTTAAcgtacaaat                                                                                                                                                                                                                                                                                      >  2:685977/1‑292 (MQ=16)                                         gTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTACTGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTTGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTCATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAGTTTTAACATCAAACCCAGATGTTAAGCGTGAAGGATAACg                                                                                                                                                                                                                                                             >  1:273243/1‑300 (MQ=255)                                                    cccGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCCGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCAACAGTTTTAACATCAAACTCAGATGTTACGCGTGAAGGATAGCGTTGCGCCAGCa                                                                                                                                                                                                                                                  >  2:29100/1‑300 (MQ=255)                                                                              atacTGCACGACCCACCACTAATGACGGTGGGCTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAAAGCACCTCCCTTACAAGGAGGAGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGCCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTAAAGGATAACGTTGAGCCAGCAACAGCACATAGGGCGagcgaagca                                                                                                                                                                                                                          >  2:278051/4‑299 (MQ=17)                                                                              aTCCTGCACGACCCACCACTAATGACGGTGGNTCCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTNGATCCCGTCATCAACCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTCGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTCACAGCAAACCCAGATGTTAAGCGTTACGGTTAACGTTGCGCCAGCAACAGCACATAGGGAGagcgaagcg                                                                                                                                                                                                                          >  2:512139/1‑300 (MQ=17)                                                                              aTCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGGTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGNGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGagcgaagcg                                                                                                                                                                                                                          <  1:495711/300‑1 (MQ=255)                                                                              aTCCTGCACGACCCACCACTAATGACGGTGGGCTCGGCGGCAGTAGTTTATAATCCCCCAAG‑CAGTATCAGGCGATTAGCTCCGCTGAAAACACCCCTCCCTTACAAGTATAGGGTCGGCGACTNGACCCCGCCATCACCCACCACTCGGGGCGTTAGCTAAGTTGGTAGAGCAGTTGACTTTTAGNCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACAAGTTTTAACATCAAACCCAGATGTTGAGAGGGAAGGATAACGTTGGGCAAGCAACggaatggagggtgagcggagcg                                                                                                                                                                                                                          >  2:572919/1‑280 (MQ=9)                                                                                        aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CCGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCCCCCTTACCAGGAGAGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTCGTTCAGTTGGTATAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGCATCCTGCACGACCAACCAGTTTTAAAATCAACCTCAGATGTTCCGCGTTAAGGCTAACGCTGCGCCAGCACCAGCCAGTAGGGCGAGCGAAGCGCGTCATCCTg                                                                                                                                                                                                                >  1:164844/1‑300 (MQ=17)                                                                                        aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTg                                                                                                                                                                                                                >  1:533567/1‑300 (MQ=255)                                                                                        aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCACGTAGGGCGAGCGAAGCGAGTCATCCTg                                                                                                                                                                                                                >  1:158272/1‑300 (MQ=255)                                                                                        aCCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGAAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCACCGGCCAGTAGGGCGAGCGAAGCGAGTCATCCTg                                                                                                                                                                                                                >  2:364741/1‑300 (MQ=255)                                                                                           caccacTAACGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGAAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCAc                                                                                                                                                                                                             <  1:368549/300‑1 (MQ=255)                                                                                                               tCGGTGGAAGTAGGTTGTGGTGTCTAGCG‑CAGTATCGGGTGAGTAGCTCAACTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCTGCTGTTCGATCCCGTCATCACCCACCACTCGGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGAt                                                                                                                                                                                         <  1:165741/300‑1 (MQ=17)                                                                                                                     gAAGTAGTTTTTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACcgaccatcctgaatgattaaggc                                                                                                                                                                                   <  1:279547/300‑18 (MQ=255)                                                                                                                     gAAGTAGTTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACcgaccatcctgaatgattaaggc                                                                                                                                                                                   >  2:277512/1‑283 (MQ=255)                                                                                                                                    aTCCAGCG‑TAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAGAAATCTTTc                                                                                                                                                                   >  1:130488/1‑300 (MQ=1)                                                                                                                                    aTCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCGAGCAACGGCACGTAGGGCGAGCGAAGCNAGTCATCCTGCCCGACCCACCAATCTTAAAGATTGGCCACGAGTAAAAATCttt                                                                                                                                                                    >  2:520700/1‑300 (MQ=255)                                                                                                                                               ggaTCGGGGGATGAACTCAGCTGGGAGAGAACCTCCCTGACAGGGAGGGGTTAGGTGGTTCGACCCCTTAATAACCCACAAC‑CGGGTCGTTAGCTCAGTTGGTAGNGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACGCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACAcc                                                                                                                                                         <  2:613578/298‑1 (MQ=17)                                                                                                                                                         aTTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                                <  1:570895/300‑1 (MQ=255)                                                                                                                                                                  gCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACGCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAAATCAGATGTTAAGCGTGCAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGCGTAAAAATCTTTCAGGTCACACCCTTATGGGTAGTTAgtccc                                                                                                                                      >  2:448121/1‑296 (MQ=14)                                                                                                                                                                         gagCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGATCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGt                                                                                                                                >  1:207200/1‑300 (MQ=255)                                                                                                                                                                          agCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CTGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTag                                                                                                                              <  2:129891/300‑1 (MQ=14)                                                                                                                                                                               ctccctgaaagggggggggTTGGCGGTTAGATCCCGTAATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAg                                                                                                                         <  1:455899/286‑1 (MQ=18)                                                                                                                                                                                 cccTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGGTAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCCTCCTGCACTACCCCCCCATTTTCCAGCTTGGCCCCGAGTAGAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCCCAGTTGGTagagaact                                                                                                                        >  1:265162/1‑296 (MQ=17)                                                                                                                                                                                 cccTCACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGNTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTAAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGNAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt                                                                                                                        >  2:656050/1‑300 (MQ=255)                                                                                                                                                                                   cTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAC‑CGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAAAACAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACAAACCACCCATCCTAAAGATTGGCAAAGAGTAAAACTCTTTAAGGTGACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGGTGa                                                                                                                     >  1:595202/1‑300 (MQ=17)                                                                                                                                                                                                                 cttcgtcaCCCACCACTCGGTTCGTTAGCTCAGTTGTTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGATTAAAAACCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAAt                                                                                        <  1:158613/295‑1 (MQ=255)                                                                                                                                                                                                                   tcatcaCCCACCACTCTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGTACGATCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                      <  1:276331/300‑1 (MQ=255)                                                                                                                                                                                                                   tcatcaCCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACTCATCAATAGGGAAGATGGGCTCTGAGGAGGAGGTGTTCAGGGAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                      <  1:618863/300‑1 (MQ=18)                                                                                                                                                                                                                   tcatcaCCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTCAAAAATTGGCCCAAAGTAGCCCTCTTTCCGGTCACACCCTTCTAGGTTGCTAGCTTAGCTGGTATAGCAGTTGACTTTTACTCAATTAGTAGAAGGTTCGAATcc                                                                                      >  1:351744/1‑300 (MQ=17)                                                                                                                                                                                                                     atcaCCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCACCGAGTAAAAACCTTTCAGGTAACCCCCATCTGGGTCGTCAGCTCAGTTGGTAGAGCAGTTGACTTTTAATTAATTGGTCGCAGGTTCGAATCCTg                                                                                    >  1:140768/1‑300 (MQ=255)                                                                                                                                                                                                                           caccacTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAc                                                                              <  1:235092/300‑1 (MQ=255)                                                                                                                                                                                                                                                 gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTAc                                                        <  1:139713/300‑1 (MQ=255)                                                                                                                                                                                                                                                 gTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAAAATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAACACCGGCCCGTAGGGCAAGCGAAGCGAGTCCTCCTGCACGACCCACCACTCTTCAAGACTGGACCAGAGTAGAAATCTTTAAGGTAACACCCGTATGGGTCTTTTGCTCAGTTTGTAGAGCAGATGATTTTTAATCGCTTGGTCGCGGTTTCGAATCCTGCACGaaccgccgactcgaaggtggttgc                                                        >  2:7265/1‑277 (MQ=18)                                                                                                                                                                                                                                                   tGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTCAGCGTGAAGAATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTCAAGATTGGCCCCGAGTAAAACTCTTTCAGGTATCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGCTGACTTTTAATCAATTGGTCGAAGGTTCAAATCCTGCACGACCCACCAATTTAAAGGTGGTTACtt                                                      >  1:82568/1‑299 (MQ=25)                                                                                                                                                                                                                                                                    tttAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGa                                     <  2:391956/300‑1 (MQ=255)                                                                                                                                                                                                                                                                        aTCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGNGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTANCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAAc                                 <  2:558659/300‑1 (MQ=255)                                                                                                                                                                                                                                                                          cAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                               <  1:7563/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                      ggTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc                   >  1:343993/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                        ttCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCAGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCaaagg                 >  1:661717/1‑297 (MQ=255)                                                                                                                                                                                                                                                                                                       aCCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGAACCACCAATCTTAAAGATTGGCACCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAACCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGACGGGCGAGAc  >  1:234739/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                       aCCCACCAGTTTTAACATCAAACTAAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAc  <  1:669174/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                     AACATCGAAGACAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAG‑CGAAG‑CGAGTCATCCTGCACGACCCACCACTAATGACGGTGGGTTCGGTGGAAGTAGTTTGTAGTATCCAGCG‑CAGTATCGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  NC_000913/780924‑781514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.