| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,492,990 | Δ1,986 bp | [trg]–[ydcI] | [trg], [ydcI] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1492990 | 1494975 | 1986 | 14 [0] | [0] 14 | [trg]–[ydcI] | [trg],[ydcI] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1492989 | 0 (0.000) | 14 (0.900) | 11/308 | 0.2 | 100% | coding (520/1641 nt) | trg | methyl‑accepting chemotaxis protein Trg |
| ? | NC_000913 | 1494976 = | 0 (0.000) | coding (96/924 nt) | ydcI | DNA‑binding transcriptional dual regulator YdcI | |||||
CCCAGTGCCGCAGTAGGTAGTGCACCAACCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCGCCCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTG > NC_000913/1494731‑1495137 | gaagcgaaatattgcgcaagccgaatcggagattaaacagtcgcagcaaggttatcgtgcttatcagaatcgaccggtgaaaacacctgctgatgaagccctcgacactgaattaaatcaacgctttcaggcttatatcacgggtatgcaacctatgttgaaatatgccaaaaatggcatgtttgaagcgattatcaatcatgaaagtgagcagatccgaccgctggataatgcttataccgataAGCcgc < 1:143773‑M2/6‑1 (MQ=255) gaaatattgcgcaagccgaatcggagattaaccagtcgcagcaaggttatcgtgcttatcagaatcgaccggtgaaaacacctgctgatgaagccctcgacactgaattaaatcaacgctttcaggcttatatcacgggtatgcaacctatgttgaaatatgccaaaaatggcatgtttgaagcgattatcaatcatgaaagtgagcagatccgaccgctggataatgcttataccgataAGCCGCGCGcc > 1:278814‑M2/241‑251 (MQ=255) gaaatattgcgcaagccgaatcggagattaaacagtcgcagcaaggttatcgtgcttatcagaatcgaccggtgaaaacacctgctgatgaagccctcgacactgaattaaatcaacgctttcaggcttatatcacgggtatgcaacccatgttgaaatatgcaaaaaatggcatgtttgaagcgattatcaatcatgaaagtgagcagatccgaccgctggataatgcttataccgataAGCCGCGCGcc > 1:351384‑M2/241‑251 (MQ=255) gcaagacgaatcggagattaaacagtcgcagcaaggttatcgtgcttatcagaatcgacaggtgaaaacacctgctgatgaagccctcgacactgaattaaatcaacgctttgaggcgtatatcacgggtatgcaacctatgttgaaatattgcaaaaacggcatgttggaatcgattaccaagcatgaaagtgagcagatccgaccgctggataatgcttataccgataAGCCGTGCGTCCCAAAGTTcc < 1:262952‑M2/21‑1 (MQ=255) gatgaagccctcgacactgaattacatcaacgctttcaggcttatatcacgggtatgcaacatctgttgaaatatgccaaaaatggcatgtttgacgcgattatcaatcatgaaagtgagcagatccgaccgctggataatgcttataacgataAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGCCTATTTTTTTCCAt > 1:227692‑M2/155‑250 (MQ=255) aaatcaacgctttcaggcttatatcacgggtatgcaacctatgttgaaatatgccaaaaatggcatgtttgcagcgattatcaatcatgaaagtgagcagatccgcccgctggataatgcttataccgataAGCCGCGCGCCCCACAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTTCCATAAGCGATGATAAAAACGAAGCGgt > 1:141275‑M2/132‑251 (MQ=255) aatcaacgctttcaggcttatatcacgggtatgcaacctatgttgaaatatgccacaactggcctgattgacgcgcttctcaatcatgacagtgagcagatccgaccgctcgatcatgcttataccgataAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACCGCTACGAATGTATGAAGGTGGCGCACCCGGATGCGCTGACTAAACAGACTATTTTTTTCCATAAg > 1:133099‑M2/131‑229 (MQ=255) tatatcacgggtatgcaacctatgttgaaatatgccaaaaatggcatgtttgaagcgattatcaatcatgaaagtgagcagatccgaccgctggataatgcttataccgataAGCCGCGCGCCCCAAagn < 1:216090‑M2/18‑2 (MQ=255) tatatcacgggtatgcaacctatgttgaaatatgccaaaaatggcatgtttgaagcgattatcaatcatgaaagtgagcagatccgaccgctggataatgcttataccgataAGCCGCGCGCCCCAAAGt > 2:216090‑M2/113‑130 (MQ=255) gttgaaatatgccaaaaatggcatgtttgaagcgattatcaatcatgaaagtgagcagatccgaccgctggataatgcttataccgataAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGTCAGCTACGAATGTATGAAGGTTGCGCAAACGGATGCGCTGACTAAACAGACTAGTTTTTCCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATTATAACTTGATTg < 1:60885‑M2/162‑1 (MQ=255) ttgaaatatgccaaaaatggcatgtttgaagcgattatcaatcatgaaagtgagcagatccgaccgctggataatgcttattccgataAGGCGCGCGCCCCAAAGGTCCTTGTTGTGCGACAGCTACGAATGTAGGAAGGTTGCGCAAACGGATGCGCTGACTAAACAGTCTATTGTTTGCCATAAACGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTg < 1:250222‑M2/162‑1 (MQ=255) atatgccaaaaatggcatggttgaagcgattatcaatcatgaaagtgagcagatccgaccgctggataatgcttataccgataATCCGCGCGCCCCAAAGTTCCTTGTTGGGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATg < 1:29413‑M2/67‑1 (MQ=255) gatccgacngctggataatgcttataccgataAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCNACAGCTACGNNTGNATGAANGNNNCNNNAANGGATGCGCTGACTAAACAGNCTNNTTTTTTNCATAAGCGATGTTAAAAACGAAGCgg < 2:77357‑M2/119‑1 (MQ=255) gatccgaccgctggataatgcttataccgataAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTTCCATAAGCGATGTTAAAAACGAAGCgg > 1:77357‑M2/33‑151 (MQ=255) | CCCAGTGCCGCAGTAGGTAGTGCACCAACCCTGACGACATCATTATTAAGACCTTCTTTACGATGAAGCGACCGTCCGGCAGTGTTGATGGCGTCAAGAACTCTGACTGCATGCGTTAAAAATTGTTCGCCGGGTAAGGTAAGTTGCGCCCCCTGACGACCACGCTCAAACAAGCGAGCGCCAGTCAGCTGCTCCAGTTCATTCAATGTCTTAGAGAGCGCAGGTTGACTCAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTG > NC_000913/1494731‑1495137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |