| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,492,990 | Δ1,986 bp | [trg]–[ydcI] | [trg], [ydcI] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1492990 | 1494975 | 1986 | 14 [0] | [0] 14 | [trg]–[ydcI] | [trg],[ydcI] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1492989 | 0 (0.000) | 14 (0.900) | 11/308 | 0.2 | 100% | coding (520/1641 nt) | trg | methyl‑accepting chemotaxis protein Trg |
| ? | NC_000913 | 1494976 = | 0 (0.000) | coding (96/924 nt) | ydcI | DNA‑binding transcriptional dual regulator YdcI | |||||
GAAGCGAAATATTGCGCAAGCCGAATCGGAGATTAAACAGTCGCAGCAAGGTTATCGTGCTTATCAGAATCGACCGGTGAAAACACCTGCTGATGAAGCCCTCGACACTGAATTAAATCAACGCTTTCAGGCTTATATCACGGGTATGCAACCTATGTTGAAATATGCCAAAAATGGCATGTTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATATTTTGAACAAAGCCGTTAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTC > NC_000913/1492745‑1493151 | gAAGCGAAATATTGCGCAAGCCGAATCGGAGATTAAACAGTCGCAGCAAGGTTATCGTGCTTATCAGAATCGACCGGTGAAAACACCTGCTGATGAAGCCCTCGACACTGAATTAAATCAACGCTTTCAGGCTTATATCACGGGTATGCAACCTATGTTGAAATATGCCAAAAATGGCATGTTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATAagccgc < 1:143773‑M1/251‑7 (MQ=255) gAAATATTGCGCAAGCCGAATCGGAGATTAACCAGTCGCAGCAAGGTTATCGTGCTTATCAGAATCGACCGGTGAAAACACCTGCTGATGAAGCCCTCGACACTGAATTAAATCAACGCTTTCAGGCTTATATCACGGGTATGCAACCTATGTTGAAATATGCCAAAAATGGCATGTTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATAagccgcgcgcc > 1:278814‑M1/1‑240 (MQ=255) gAAATATTGCGCAAGCCGAATCGGAGATTAAACAGTCGCAGCAAGGTTATCGTGCTTATCAGAATCGACCGGTGAAAACACCTGCTGATGAAGCCCTCGACACTGAATTAAATCAACGCTTTCAGGCTTATATCACGGGTATGCAACCCATGTTGAAATATGCAAAAAATGGCATGTTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATAagccgcgcgcc > 1:351384‑M1/1‑240 (MQ=255) gcAAGACGAATCGGAGATTAAACAGTCGCAGCAAGGTTATCGTGCTTATCAGAATCGACAGGTGAAAACACCTGCTGATGAAGCCCTCGACACTGAATTAAATCAACGCTTTGAGGCGTATATCACGGGTATGCAACCTATGTTGAAATATTGCAAAAACGGCATGTTGGAATCGATTACCAAGCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATAagccgtgcgtcccaaagttcc < 1:262952‑M1/251‑22 (MQ=255) gatgaAGCCCTCGACACTGAATTACATCAACGCTTTCAGGCTTATATCACGGGTATGCAACATCTGTTGAAATATGCCAAAAATGGCATGTTTGACGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATAACGATAagccgcgcgccccaaagttccttgttgtgcgacagctacgaatgtatgaaggtggcgcaaacggatgcgctgactaaacagcctatttttttccat > 1:227692‑M1/1‑154 (MQ=255) aaaTCAACGCTTTCAGGCTTATATCACGGGTATGCAACCTATGTTGAAATATGCCAAAAATGGCATGTTTGCAGCGATTATCAATCATGAAAGTGAGCAGATCCGCCCGCTGGATAATGCTTATACCGATAagccgcgcgccccacagttccttgttgtgcgacagctacgaatgtatgaaggtggcgcaaacggatgcgctgactaaacagactatttttttccataagcgatgataaaaacgaagcggt > 1:141275‑M1/1‑131 (MQ=255) aaTCAACGCTTTCAGGCTTATATCACGGGTATGCAACCTATGTTGAAATATGCCACAACTGGCCTGATTGACGCGCTTCTCAATCATGACAGTGAGCAGATCCGACCGCTCGATCATGCTTATACCGATAagccgcgcgccccaaagttccttgttgtgcgaccgctacgaatgtatgaaggtggcgcacccggatgcgctgactaaacagactatttttttccataag > 1:133099‑M1/1‑130 (MQ=255) tataTCACGGGTATGCAACCTATGTTGAAATATGCCAAAAATGGCATGTTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATAagccgcgcgccccaaagt > 2:216090‑M1/1‑112 (MQ=255) tataTCACGGGTATGCAACCTATGTTGAAATATGCCAAAAATGGCATGTTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATAagccgcgcgccccaaagn < 1:216090‑M1/130‑19 (MQ=255) gTTGAAATATGCCAAAAATGGCATGTTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATAagccgcgcgccccaaagttccttgttgtgcgtcagctacgaatgtatgaaggttgcgcaaacggatgcgctgactaaacagactagtttttcccataagcgatgttaaaaacgaagcggtgtcgctgacaagtgaagttgtttgattattataacttgattg < 1:60885‑M1/251‑163 (MQ=255) ttGAAATATGCCAAAAATGGCATGTTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATTCCGATAaggcgcgcgccccaaaggtccttgttgtgcgacagctacgaatgtaggaaggttgcgcaaacggatgcgctgactaaacagtctattgtttgccataaacgatgttaaaaacgaagcggtgtcgctgacaagtgaagttgtttgattatgataacttgattg < 1:250222‑M1/250‑163 (MQ=255) atatGCCAAAAATGGCATGGTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATAatccgcgcgccccaaagttccttgttgggcgacagctacgaatgtatgaaggtggcgcaaacggatg < 1:29413‑M1/150‑68 (MQ=255) gATCCGACNGCTGGATAATGCTTATACCGATAagccgcgcgccccaaagttccttgttgtgcnacagctacgnntgnatgaangnnncnnnaanggatgcgctgactaaacagnctnnttttttncataagcgatgttaaaaacgaagcgg < 2:77357‑M1/151‑120 (MQ=255) gATCCGACCGCTGGATAATGCTTATACCGATAagccgcgcgccccaaagttccttgttgtgcgacagctacgaatgtatgaaggtggcgcaaacggatgcgctgactaaacagactatttttttccataagcgatgttaaaaacgaagcgg > 1:77357‑M1/1‑32 (MQ=255) | GAAGCGAAATATTGCGCAAGCCGAATCGGAGATTAAACAGTCGCAGCAAGGTTATCGTGCTTATCAGAATCGACCGGTGAAAACACCTGCTGATGAAGCCCTCGACACTGAATTAAATCAACGCTTTCAGGCTTATATCACGGGTATGCAACCTATGTTGAAATATGCCAAAAATGGCATGTTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATATTTTGAACAAAGCCGTTAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTC > NC_000913/1492745‑1493151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |