| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,302,147 | Δ5 bp | coding (966‑970/1632 nt) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1302147 | 1302151 | 5 | 18 [0] | [0] 18 | oppA | oligopeptide ABC transporter periplasmic binding protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1302146 | 0 (0.000) | 18 (0.940) | 14/274 | 0.2 | 100% | coding (965/1632 nt) | oppA | oligopeptide ABC transporter periplasmic binding protein |
| ? | NC_000913 | 1302152 = | 0 (0.000) | coding (971/1632 nt) | oppA | oligopeptide ABC transporter periplasmic binding protein | |||||
AAAACCGTTATTAACCAGGTAACCTATTTGCCTATTGCTTCTGAAGTTACCGATGTCAACCGCTACCGTAGTGGTGAAATCGACATGACGAATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTAT > NC_000913/1301902‑1302354 | acgcgaaaaccgttattaaccaggtaacctatttgcctattgcttctgaagttcccgatgtcaaccgctaccgtagtggtgaaatcgacatgacgtataacagcatgcctatcgaatttttccagaagctgaaaaaagagatcccggacgaagtgcacgttgatccatacctgtgcacttactagtacgaaagtaacaaccagaaaccgccattcaacgatgtgcgtgtgcgtaccgcactgaaactagga < 1:484796‑M2/1‑1 (MQ=255) ccgatgtcaaccgctaccgtagtggtgaaatcgacatgacgtataacagcatgccgatcgaattgttccagaagctgaaaaaagagatcccggacgaagttcacgttgatccatacctgtgcacttactattacgcaattaacaaccagaaaccgccattcaacgatgtgcgtgtgcgtaccgcactgaaactaggACCGCGATATCATTGTTCATACAGTGAAAGCGCAg > 1:291532‑M2/197‑231 (MQ=255) aaaatcgacatgtcgtaaaacagcatgccgatcgaattgttccagaagctgaaaaaatagatccgggacgaagtccacgtggatccatacttgtgcacttctttttacgaaattaacaaccagaaaccgccattcaacgatgtgcgtgtgcgtaccgcactgaaactaggACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGgcg < 1:446066‑M2/81‑1 (MQ=255) aaatcgacatgacgtaaaacagcatgccgatcgaattgttccagaagctgaaaaaagagatcccggacgaagttcacgttgatccatccctgtgcacttactattacgaaattaacaaccagaaaccgccattcaacgatgtgcgtgtgcgtaccgcactgaaactaggACCGCGATATCATGGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGgcgc < 1:350637‑M2/82‑1 (MQ=255) cgtataacagcatgccgatcgaattgttccagaagctgaaaaaagagatcccggacgaagttcacgttgatccatccctgtgcacttactattacgaaattaacaaccagaaaccgccattcaacgatgtgcgtgtgcgtaccgcactgaaactaggACCGCGatat > 1:426990‑M2/158‑167 (MQ=255) gaatttttccagaagctgaaaaaagagatcccggacgaagtccccgttgatccatacctgtgcacttaatattacgaaattaacaaccagaaaccgccattcaacgatgggcgtgtgcgtaccgcactgaaactaggACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGtt < 1:166189‑M2/106‑1 (MQ=255) gctgaaaaaagagatcccggacgaagttcacgttgatccatacctgtgcacttactattacgaaattaacaaccagaaaccgccattcaacgatgtgcgtgtgcgtaccgcactgaaactaggACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGt > 1:179439‑M2/124‑251 (MQ=255) gaaaaaagagatcccggacgaagttcacgttgatccatacctgtgcacttactattacgaaattaacaaccagaaaccgcaattcaccgatgtgcgtgtgcgtaccgcactgaaactaggACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGaa > 1:235756‑M2/121‑242 (MQ=255) aaaagagatccaggacgaagttcacgttgatccataactgtgcacttactattacgaaattaacaaccagaaaccgccattcaacgatgtgcgtgtgcgtaccgcactgaaactaggACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGa > 1:428593‑M2/118‑217 (MQ=255) ccggacgaagttcacgttgatccatacctgtgcacttactattacgaaattaacaaccagaaaccgccattcaacgatgtgcgtgtgcgtaccgcactgaaactaggACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCa > 1:285054‑M2/108‑172 (MQ=255) nttcacgttgatccatacctgtgcacttactattacgaaattaacaaccagaaaccgccattcaacgatgtgcgtgtgcgtaccgcactgaaactaggAcc > 1:308877‑M2/99‑101 (MQ=255) gttcacgttgatccatacctgtgcacttactattacgaaattaacaaccagaaaccgccattcaacgatgtgcgtgtgcgtaccgcactgaaactaggAcc < 2:308877‑M2/3‑1 (MQ=255) ccatacctgtgcacttactattacgaaattaacaaccagaaaccgccattcaacgatgtgcgtgtgcgtaccgaactgacactaggACCGCGCTATCATTGtt > 1:502706‑M2/87‑103 (MQ=255) gaaaccgccattcaacgatgtgcgtgtgcgtaccgcactgaaactaggACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGtat > 1:37042‑M2/49‑251 (MQ=255) tgtgcgtgtgcgtaccgcactgaaactaggCCCGCGATATCATTGGTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATggcn < 1:45397‑M2/81‑2 (MQ=255) ngtaccgcactgaaactaggACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAAcc > 1:96342‑M2/21‑201 (MQ=255) gaaactaggACCGCGATATCATTGTTAATAAAGTGAAAGCGCAggg < 1:382948‑M2/37‑1 (MQ=255) actaggACCGCGATCTCATTGTTAATAACGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGCTGGCGCAAACTTGACTCAGCCCGAATGGTTTGGCTGGAGCCAGGAAACACGTAACGAAGAAGCGAAAAAActgctg > 1:168516‑M2/7‑158 (MQ=255) | AAAACCGTTATTAACCAGGTAACCTATTTGCCTATTGCTTCTGAAGTTACCGATGTCAACCGCTACCGTAGTGGTGAAATCGACATGACGAATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTAT > NC_000913/1301902‑1302354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |