Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	2,174,817	IS1 (+) +9 bp	coding (225‑233/453 nt)	gatA ←	galactitol‑specific PTS enzyme IIA component

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1978503 =	NA (NA)	22 (1.140)	18/278	0.1	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	2174817 =	0 (0.000)					coding (233/453 nt)	gatA	galactitol‑specific PTS enzyme IIA component
*	?	NC_000913	= 1979270	NA (NA)	35 (1.810)	26/278	0.0	100%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 2174825	0 (0.000)					coding (225/453 nt)	gatA	galactitol‑specific PTS enzyme IIA component

CAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979044‑1979270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTTACGCTGTTTATTTGGCAAGTTACAACAGCCCGATATCGTCGAGACACTAATCACTCTTCCTGAAACCCAGTTAAAGGAATACTTCACAAAGTATGTTTTAGATTCAGACGAATAAATCCCTCTGT  <  NC_000913/2174825‑2174587                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    nAATGATTTTCTGGTGCGTACCGGGTTGAGACGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTC                                                                                                                                                                                                                          >  1:57833/2‑250              GTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTCCGGCAGTGAGAGCAGAGATAGAGCTGATGTCAGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGCGGGACAGCTGATAGAATCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATT                                                                                                                                                                                                                       >  1:506429/1‑240                         GTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGACCGGCGGCGCTTTTGCCGTTACGAAACACCCCGACAGTAGCTGAACAGGAGGGGCCGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAACACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATA                                                                                                                                                                                                  >  1:477185/1‑250                                                                 ACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGA                                                                                                                                                          <  1:38111/250‑1                                                                    nCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGTGTGTGGAAAAT                                                                                                                                                      >  1:303175/2‑251                                                                     nAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTCGCTGAACAGGAGGGACAGCTGATAGAACCAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGGTATTGCGTTGATTGTGGAAAATC                                                                                                                                                     >  1:47224/2‑251                                                                           GAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTAGTGCGTTGATTGTGGAAAATCCGCAGn                                                                                                                                               <  1:406653/251‑2                                                                           GAGCAGAGATAGCGCTGAGGTCCGGCGGTGCTTTTGCCGTTACGCACCGCCCCGTCAGTATCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACGTCAAAAACACCGTCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGG                                                                                                                                                                                                                                          <  1:338899/160‑1                                                                                GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATTCACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAAGAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTn                                                                                                                                                              <  1:62545/231‑2                                                                                                                 GTTACGCACCACCCCGTCAGTAGATGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACAATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGG                                                                                                                                                                                                                                          >  1:341317/1‑122                                                                                                                    ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAA‑CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCACTTGAAACTTTTACGCTGTTTATTTGGCAAGTTACAAC                                                                                                     <  1:262619/251‑1                                                                                                                             CCCGTCAGTAGCTGAACAGGAGGGACAGCTGATCGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTACGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCAGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTT                                                                                                                               >  1:11648/1‑217                                                                                                                              CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAn                                                                                                                                                                                                                  <  1:406833/133‑2                                                                                                                              CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGC                                                                                                                                                                                                                                         >  1:386486/1‑110                                                                                                                                       nCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAA                                                                                                                                                        >  1:102910/2‑182                                                                                                                                          GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATAAGTAAGTTGGCAGCATCACAGTTAAGGCCAA                                                                                                                                                                                                                                      >  1:492898/1‑101                                                                                                                                               GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTTACGCTGTTTATTTGGCAAGTTACAACAGCCCGATATCGTCGAGACACTAATC                                                                           >  1:422776/1‑251                                                                                                                                                GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTTACGCTGTTTATTTGG                                                                                                                <  1:386439/213‑1                                                                                                                                                         nTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCAAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAG                                                                                                                                             >  1:57267/2‑175                                                                                                                                                          TGATAGAAACAGAAGCCACTGGAGCACCTCAAAACCAACATCATACACTATATCAGTAAGATGGAAGCATCACCGTTACGGCCAACAACTAAAGTTCATTTTCAGCAAGCGGATGATGATAGCGACGTGGCGGTATCGTTGGTTTTTGCGTTGATTGTGGCAAATCCGCAGCAGCAATTGACAAATTTACGCTGTTCTTTTGGCAAGTTACAACAGACCGAAATCGTCGAGACACTAATCACTATTCCTG                                                                 >  1:258095/1‑250                                                                                                                                                           GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTGGGCAGCATCGCCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGGGGATGATGATAGCGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATT                                                                                                                                        <  1:286252/178‑1                                                                                                                                                               GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCGATAAGGCAAACAAATAAAGTTCATTTTCAGCACGCGGATGATGATAACGACG                                                                                                                                                                                            >  1:373466/1‑122                                                                                                                                                                   CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCC                                                                                                                                                    >  1:222586/1‑158                                                                                                                                                                            CTGGAGCACCTGAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCCTCCCCGTTAAGGCCAACAAATAAAGT                                                                                                                                                                                                                            <  1:265602/77‑1                                                                                                                                                                                 GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGAGGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCG                                                                                                                                                   <  1:259336/145‑1                                                                                                                                                                                 GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGCCCAACAAATACAGTTCATTTTCAGCAAGCGGATGCTGATAACGACGTGGCGGTATCGTT                                                                                                                                                                               >  1:484728/1‑117                                                                                                                                                                                   ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTTACGCTGTTTATTTGGCAAGTTACAACAGCCCGATATCGTCGAGACACTAATCACTCTTCCTGAAACCCAGTTAAAGGAATACTTCAC                                        >  1:3145/1‑250                                                                                                                                                                                       CAAAAACACCATCATACACTAAAGCAGTAAGTTGGCAGCATCACCGTGAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGTATGATTATAACGACGTTGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTTACGCTGTTTATTTTGCAAGGTACAACAGCCCGATAGCGTCGAGACACTAATCCCTCTTCCGGAAACCCAGTTAAAGGAATACTTCACAAAG                                    <  1:211867/250‑1                                                                                                                                                                                        AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGTCCAACAAATAAAGTTCATTGGCAGCAAGCGGATGATGATAACGACGTGGCGGTAGCGTTGGTTATTGCGTTGTTTGTGTAAAATCCTCAGCAGCAATTGAAACTGTGTCGCTGTTTATCTGGCAAGGTACAAGAGCCCGAGAGCCTCGAGACACTAATCATTCTTCCTGAAACCCAGTTAAAGGAATACTTCACAAAGTA                                  <  1:280246/251‑1                                                                                                                                                                                         nAAACACCATCATACACTAAATCAGTAAGCTGGCAGCCTAACCGTTAAGACCACCAAATAAAGTTAATTTTCAGCAAGCGGATGATGATCACGACGTAGCGGTATCGTTGGTTCTTGCGTTGATTGTGGAAACTCCGCAGCAGCACTTGAAACTTTTACGCTGTTTATTTGGCAAGTTATAACAACCCGCTATCGTCGAGACACTAATCACTCTTCCTGAAACCCAGCTAAAGGAATACTTCACAAAGTAT                                 >  1:56654/2‑251                                                                                                                                                                                                   CATACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGAAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATC                                                                                                                                                     >  1:247784/1‑125                                                                                                                                                                                                      ACACTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTGTCAGCAAGCGGATGATTATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTGTACGCTGTTTATTTGGCAAGTTGCAACAGCCCGATATCGTCGAGACACTAATCACTCTTCC                                                                   <  1:375225/204‑1                                                                                                                                                                                                         CTAAATCAGTAAGTTGGCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTTACGCTGTTTATTTGGCAAGTTACAACAGCCCGATATCGTCGAGACACTAATCACTCTTCCTG                                                                 <  1:8832/203‑1                                                                                                                                                                                                                         GCAGCATCACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGCTGCTAACGACGTGGCGGTATCGTTGGTTTTTGAGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTTACGCTGTTTATTTGGCAAGTTACAACAGCCCGATATCGTCGAGACACCAATCACTCTTCCTGAAACCCAGTTAAAGGAATACTTCACAAAGTATGTTTTAGATTCAGACGAATAAATCCCTCTGT  >  1:276098/1‑250                                                                                                                                                                                                                                CACCGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTTACGCTGTT                                                                                                                       <  1:166746/126‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAATGATTTTCTGGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGTGAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979044‑1979270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTTACGCTGTTTATTTGGCAAGTTACAACAGCCCGATATCGTCGAGACACTAATCACTCTTCCTGAAACCCAGTTAAAGGAATACTTCACAAAGTATGTTTTAGATTCAGACGAATAAATCCCTCTGT  <  NC_000913/2174825‑2174587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.