| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,303,073 | Δ12 bp | coding (175‑186/921 nt) | oppB → | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1303073 | 1303084 | 12 | 16 [0] | [0] 14 | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1303072 | 0 (0.000) | 14 (1.080) | 12/288 | 0.1 | 100% | coding (174/921 nt) | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| ? | NC_000913 | 1303085 = | 0 (0.000) | coding (187/921 nt) | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB | |||||
ATTTTTATCGCATTACAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACACCAAATGGGACT > NC_000913/1302856‑1303283 | ncacggtgtctgatttttatcgcattaaagaaggcacaggccagaaggtagggcaatgttaaaatttattctacgtcgctgtctggaagcgattccgacgctatttattcttattactatttcgttctttatgatgcgcctcgcgccgggaagcccttttaccggcgaacgtactttaccgccagaagtgatggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGAaacaa > 1:80048‑M2/230‑250 (MQ=255) tatcgcattacagacggcaccggccagaaggcgggccaatattaaaatttattctcggtcgctgcctggaagcgcttcagacgctatttattcttcttcctatttcgatctttatgatgcgcctcgcaccgggaagcccttttaccggcgaacgtactataccgccagaagtgatggccaatatcgaagcgcaatatcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTc > 1:118767‑M2/213‑251 (MQ=255) gctgtctggaagcgattccgacgctatttattcttattactatttcgttctttatgatgcgcctcgcgccgggaagcccttttaacggcgaacgtactttaccgccagaagtgatggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGACACAACTGGCGCACGGTGATTTCGGTCCATAGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTccc > 1:221805‑M2/153‑251 (MQ=255) ccgacgctatttattcttattactatttcgttctttatgatgcgcctcgcgccgggaagcccttttaccggcgaacgtactttaccgccagaagtgatggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTAGCTGAAACAGCTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAATATTATTCGGTCAATGTCTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTggg < 1:217967‑M2/116‑1 (MQ=255) tttattcgtatttctatttcgttctgtatgatgcgcctcgcgccgggaagcccgtttaccgtcgaacgtacttgaccgccagaagtgattgctaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGa < 1:295418‑M2/16‑1 (MQ=255) cgttctttatgatgcgcctcgcgccgggaagcccttttacaggcgaacgtactttaccgacagaagtgatggcccacatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAAt > 1:118782‑M2/108‑250 (MQ=255) cccttttaccggcgaacgtactttaccgccagaagtgatggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTGAAATATAAAGATTATGCGGTCAATGGCTTGGTTGCATCCAGTTTTCCCGGTTCTTGCAAACTGGGTGCCGCAGCATTTTTCCTTGCTGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCAt < 1:166062‑M2/175‑1 (MQ=255) cttttaccggcgaacgtactttaccgacagaagggatggacaatatcgaagagaaatataatattaatgatccgTATTTCAGCTAACTGAAACAACTGGCGCACGGGGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTg > 1:123578‑M2/75‑234 (MQ=255) aacgtactttaccgccagaagtgatggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTAGTCGGTCAATGACTGGGTTGCATCCAGTTTTCCCGTGTCGGCCAAACTGGGAGCCGCAGCATTTTTCCGTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACAcc < 1:179580‑M2/189‑1 (MQ=255) ncgccagaagtgatggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATACAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACACCAAATGGGACt > 1:261697‑M2/52‑250 (MQ=255) ccaatatcgaagcgaaatatcatctgaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCTGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTgg < 1:220883‑M2/115‑1 (MQ=255) atatcgaancnnnanntcatcttaatgatccgTATTTCAGCTAcc > 2:223409‑M2/33‑45 (MQ=255) atatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTAcc < 1:223409‑M2/13‑1 (MQ=255) cgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCCGTCAAAGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCATCATTTTTCCTTGCGGTAATACTggg < 1:269243‑M2/149‑1 (MQ=255) | ATTTTTATCGCATTACAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACACCAAATGGGACT > NC_000913/1302856‑1303283 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |