| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,303,073 | Δ12 bp | coding (175‑186/921 nt) | oppB → | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1303073 | 1303084 | 12 | 16 [0] | [0] 14 | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1303072 | 0 (0.000) | 14 (1.080) | 12/288 | 0.1 | 100% | coding (174/921 nt) | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| ? | NC_000913 | 1303085 = | 0 (0.000) | coding (187/921 nt) | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB | |||||
CGTGGGGCAGGAGTGTCCTGCTCCACGGTGTCTGATTTTTATCGCATTACAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACA > NC_000913/1302822‑1303271 | cGTGGGGCAGGAGTGTCCTGCTCCACGGTGTCTGATTTTTATCGCATTACAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTGTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAATCGAAATATCATCTTAATGATCCg < 1:52943/251‑1 (MQ=255)cGTGGGGCAGGAGTGTCCTGCTCCACGGTGTCTGATTTTTATCGCATTACAGAAGGCACAGGCCAGAAGGGAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGATATTTATTCGTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCTGGGAAGCCCGTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCGTAATGATCCg < 1:3080/251‑1 (MQ=255) ncaCGGTGTCTGATTTTTATCGCATTAAAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaa > 1:80048‑M1/2‑229 (MQ=255) tATCGCATTACAGACGGCACCGGCCAGAAGGCGGGCCAATATTAAAATTTATTCTCGGTCGCTGCCTGGAAGCGCTTCAGACGCTATTTATTCTTCTTCCTATTTCGATCTTTATGATGCGCCTCGCACCGGGAAGCCCTTTTACCGGCGAACGTACTATACCGCCAGAAGTGATGGCCAATATCGAAGCGCAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttc > 1:118767‑M1/1‑212 (MQ=255) gCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTAACGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgacacaactggcgcacggtgatttcggtccatagtttaaatataaagattattcggtcaatgacttggttgcatccagttttccc > 1:221805‑M1/1‑152 (MQ=255) ccGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctagctgaaacagctggcgcacggtgatttcggtccatcgtttaaatataaatattattcggtcaatgtcttggttgcatccagttttcccgtttctgccaaactggg < 1:217967‑M1/251‑117 (MQ=255) tttattCGTATTTCTATTTCGTTCTGTATGATGCGCCTCGCGCCGGGAAGCCCGTTTACCGTCGAACGTACTTGACCGCCAGAAGTGATTGCTAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctga < 1:295418‑M1/142‑17 (MQ=255) cGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACAGGCGAACGTACTTTACCGACAGAAGTGATGGCCCACATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtccatcgtttaaatataaagattattcggtcaatgacttggttgcatccagttttcccgtttctgccaaactgggagccgcagcatttttccttgcggtaat > 1:118782‑M1/1‑107 (MQ=255) cccTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtccatcgttgaaatataaagattatgcggtcaatggcttggttgcatccagttttcccggttcttgcaaactgggtgccgcagcatttttccttgctgtaatactgggtgttagtgctggcgttattgccgcat < 1:166062‑M1/251‑176 (MQ=255) cTTTTACCGGCGAACGTACTTTACCGACAGAAGGGATGGACAATATCGAAGAGAAATATAATATTAATGATCCGtatttcagctaactgaaacaactggcgcacggggatttcggtccatcgtttaaatataaagattattcggtcaatgacttggttgcatccagttttcccgtttctgccaaactgggagccgcagcatttttccttgcggtaatactgggtgttagtgctg > 1:123578‑M1/1‑74 (MQ=255) aaCGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtccatcgtttaaatataaagattagtcggtcaatgactgggttgcatccagttttcccgtgtcggccaaactgggagccgcagcatttttccgtgcggtaatactgggtgttagtgctggcgttattgccgcattaaaacaaaacacc < 1:179580‑M1/251‑190 (MQ=255) ncgCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtccatcgtttaaatatacagattattcggtcaatgacttggttgcatccagttttcccgtttctgccaaactgggagccgcagcatttttccttgcggtaatactgggtgttagtgctggcgttattgccgcattaaaacaaaacaccaaatgggact > 1:261697‑M1/2‑51 (MQ=255) ccAATATCGAAGCGAAATATCATCTGAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttctgtccatcgtttaaatataaagattattcggtcaatgacttggttgcatccagttttcccgtttctgccaaactgg < 1:220883‑M1/150‑116 (MQ=255) atatCGAANCNNNANNTCATCTTAATGATCCGtatttcagctacc > 2:223409‑M1/1‑32 (MQ=255) atatCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacc < 1:223409‑M1/45‑14 (MQ=255) cGtatttcagctacctgaaacaactggcgcacggtgatttcggtccatcgtttaaatataaagattattccgtcaaagacttggttgcatccagttttcccgtttctgccaaactgggagccgcatcatttttccttgcggtaatactggg < 1:269243‑M1/151‑150 (MQ=255) | CGTGGGGCAGGAGTGTCCTGCTCCACGGTGTCTGATTTTTATCGCATTACAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACA > NC_000913/1302822‑1303271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |