| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,737,137 | IS2 (+) +5 bp | coding (37‑41/825 nt) | bax ← | putative glycoside hydrolase Bax |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3187426 | NA (NA) | 16 (1.610) | 11/320 | 0.0 | 100% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 3737137 = | 0 (0.000) | coding (41/825 nt) | bax | putative glycoside hydrolase Bax | |||||
| * | ? | NC_000913 | = 3737141 | 0 (0.000) | 10 (1.000) | 8/322 | 0.1 | 100% | coding (37/825 nt) | bax | putative glycoside hydrolase Bax |
| ? | NC_000913 | 4498181 = | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
TAATGTAAGGCATTACGGTCCGGAGAAACGCCTTTTTCCTTGGTGTTCCGGAAGGGTATTTTCGCAAATCAGGAAGTGAACTACTCTTTGCACTATTGCGAGAATACTCTTGTTTACTGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTTATATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAAGAGCACCCCAAGGAATAGTCCAAATCTGAAACTATGTCACGTGTTAACGATTCAGATTGGCGCTAAATCGCAGAAAATGTGGGGGTTATCGCAAAATTCAGCCGTTTTTTGCGCG > NC_000913/3736913‑3737385 | atagcagagagcttcgtgaaaacgagaaagcgtgactacatcagtatcatgcccaaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcggtcgccacgggaatatctgcggcatcgggcgtgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAATCATCGCCCCATATCGTCGTATg < 1:220989‑M2/27‑1 (MQ=255) tcgtgaaaacgataaagcgggactacatcagtatcatgcccaagccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaagggcatccgcatagtgcgctgggttagcgctcgccacggtaatatcttgggcagcgggcttgtaatgggttaagtgttaacagaggtctggaaatagaggtgcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAatc < 1:104851‑M2/39‑1 (MQ=255) cGGTCCGGAGAAACGCCTTTTTCCTTGGTTTTCCGGAAGGGTATTTTCGCAAAGCAGGAAGTGAACTACTCTTTGCACTATTGCGAGAATACTTTTGTTTACTGCTTACCTGTTTATTTCTAGCTTTAGTTAAGTGGGACTTGTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaatctccagacaaccaatatca < 1:108065‑M1/251‑38 (MQ=255) nggtATTTTCGCAAATCAGGAAGTGAACTACTCTTTGCACTATTGCGAGAATACTCTTGTTTAATGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact > 1:44635‑M1/2‑176 (MQ=255) caaaccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTtat > 1:63555‑M2/172‑251 (MQ=255) tgtATTTTCGCAAATCAGGAAGTGAACTACTCTTTGCACTATTGCGAGAATACTCTTGTTTACTGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact > 1:13521‑M1/2‑175 (MQ=255) ngttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAatca > 1:133212‑M2/131‑137 (MQ=255) cgtncgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAatca < 2:133212‑M2/7‑1 (MQ=255) aTACTCTTTTTTACTGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCTTCTTCGCTAACACCTCGCTCGAAAACACCAGAGTGAGTAACATAAGAATgagacttgccccctgaatctccagacaaccaatatcacttaaataagtgatagtctgaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggaaaaacgcagac < 1:95760‑M1/251‑126 (MQ=255) acgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTTATATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCa > 1:69378‑M2/116‑248 (MQ=255) gTTTACTGCTTACCTGTTTATTACTAGCTTTAGTTTAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctg > 1:13220‑M1/1‑118 (MQ=255) tNNGTGGGANNTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctg < 2:13220‑M1/99‑16 (MQ=255) tcggcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAACCATCGCCCCATatcgtcn < 1:62833‑M2/23‑2 (MQ=255) gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGa > 1:192848‑M2/64‑93 (MQ=255) ggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTTATATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAAGAGCACCCCAAGGAATAGTCCAAATCTGAAACTATGTCACGTGTTAACGATTc > 1:12204‑M2/62‑248 (MQ=255) gCTGTTGATGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagacaggccccctgcatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatagcaattgttcagcagagctttgaaccggggatgacggt > 1:151111‑M1/1‑65 (MQ=255) agcgggcttgtaatgggttagtgataacagatgtctggaaatataggggcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTTATATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAAGAGCACCCCAAGGAATAGTCCAAATCTGAAACTATGTCACGTGTTAACGATTCAGATTgg < 1:5862‑M2/194‑1 (MQ=255) tgttgtGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggag < 1:193160‑M1/146‑87 (MQ=255) gtgCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt > 1:15234‑M1/1‑54 (MQ=255) aatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTTATATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAAGAGCACCCCAAGGAATAGTCCAAATCTGAAACTATGTCACGTGTTAACGATTCAGATTGGCGCTAAatn < 1:53066‑M2/203‑2 (MQ=255) cTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaaga > 1:178728‑M1/1‑36 (MQ=255) gtctggaaatataggggcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTTATATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAAGAGCACCCCAAGGAATAGTCCAAATCTGAAACTATGTCACGTGTTAACGATTCAGATTGGCGCTAAATCGCAGAAAATGTGGGGGTTATCGc < 1:18232‑M2/226‑1 (MQ=255) ggcaaatccaAGAATCATCGCCCCATNTCGTCGNNTGNGAGTCAAAATCATCAGGTCNCCNNNTNNNANTTAATNATNNCAACACCTTNTATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCNAGAGCACCCNNAGGAATAGTCCAAATCTGAAANTATNNCNNGNGTTNAc > 2:47319‑M2/11‑192 (MQ=255) ncaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTAGGATTTAATCATTCCAACACCTTATATTTTTCACACATTTGAGAGTTGAATCTCAAATCATATCAAACATAGCTGTCAAGAGCAcc > 1:19383‑M2/10‑150 (MQ=255) caAGAATCATCGCCCCATCTCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTTATATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAAGAGCACCCCAAGGAATAGTCCAAATCTGAAACTATGTCACGTGTTAACGATTCAGATTGGCGCTAAATCGCAGAAAATGTGGGGGTTATCGCAAAATTCAGCCGTTTTTTGcgcg > 1:75223‑M2/3‑251 (MQ=255) caAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTGGATCATTCAAACACCTTATATTTTTCTCCAATTTGAGAGTTGAGTCTCAAATCATATCAAAAATAGCTGTCTAGAGCACTCCTAGGAATAGTCCAAATCTGAAAATATGTCACGTGATACCGATTCAGATTGGCGCTAAATCGCAGAAAATGTGGGGGTTATAGCAAAATTCAGc > 1:158214‑M2/3‑238 (MQ=255) | TAATGTAAGGCATTACGGTCCGGAGAAACGCCTTTTTCCTTGGTGTTCCGGAAGGGTATTTTCGCAAATCAGGAAGTGAACTACTCTTTGCACTATTGCGAGAATACTCTTGTTTACTGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTTATATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAAGAGCACCCCAAGGAATAGTCCAAATCTGAAACTATGTCACGTGTTAACGATTCAGATTGGCGCTAAATCGCAGAAAATGTGGGGGTTATCGCAAAATTCAGCCGTTTTTTGCGCG > NC_000913/3736913‑3737385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |