| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,135,180 | IS2 (–) +5 bp | coding (1346‑1350/2181 nt) | katG → | catalase/hydroperoxidase HPI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4135180 = | 0 (0.000) | 11 (1.100) | 9/322 | 0.1 | 100% | coding (1346/2181 nt) | katG | catalase/hydroperoxidase HPI |
| ? | NC_000913 | 4498181 = | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 4135184 | 0 (0.000) | 16 (1.600) | 13/322 | 0.0 | 100% | coding (1350/2181 nt) | katG | catalase/hydroperoxidase HPI |
| ? | NC_000913 | = 4499511 | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
GTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTGG > NC_000913/4134957‑4135428 | gctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGaa < 1:87218‑M1/16‑1 (MQ=255) cGAGAAGATCTCTCGTCGTTTCATCAACGATCCGCAGGCGTTCAACGAAGCCTTTTCCCGTGCCTCGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGGAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct > 1:200740‑M1/1‑193 (MQ=255) ggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGa < 1:60233‑M1/15‑1 (MQ=255) ngtTCAACGAAGCCTTTGCCCGTGCCTGGATCAAACTGACGCCCAGGGATATGGGGCCGAAATCTCGCTACATAGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgc > 1:62025‑M1/2‑155 (MQ=255) gCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGAGCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCTAGCAGGACATGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgttgcgagcgataacccagcgcactatgcggatg < 1:196008‑M1/251‑108 (MQ=255) ctatGCCCGGGCCTGGTTCAAACCCACGCACGGGGAGATGTGGCCGAAATCTCGCTACATCGGGCCGGAATATCCGAAAGAAGAGCGTATCCGGCAAGATCCGTCGCCGCATCCGGTCCACAACTCGACCGAGCGGGACAtttg < 1:175149/141‑3 (MQ=255) ccGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgn < 1:43544‑M1/145‑10 (MQ=255) ccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGGGCCAACGGTgc < 1:162459‑M1/124‑1 (MQ=255) ccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTgc < 1:162449‑M1/124‑1 (MQ=255) ntctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttacgtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCgg < 1:129723‑M1/109‑1 (MQ=255) gccctaagacatccatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCggtg < 1:63792‑M1/111‑1 (MQ=255) aTCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACACGACCGAGCAGGCCACTtggatttgcccctatatttcccgacatatgttatcacttaacacattacaagcccgccgccgcagatattcccgaggcgagcgataacccagcgcactatgcggatgccattcgttataatcctcgaacgcctctgcaaggttctttgctgccgttaacccgtctgg > 1:195840‑M1/1‑84 (MQ=255) ctagtctaaaaactagtatttagactatcacttatttaagtgatattgcttgtctggagattcagggggccagtctaACATTATCTATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCt > 1:221625‑M1/78‑154 (MQ=255) ggAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGCTCTACAACCAGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta > 1:89485‑M1/1‑76 (MQ=255) ccGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattgcaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggattccattcgttataaggctcgaacgcctctgcaaggttctttgctgccgttaacccgtcgggtttgggcatg < 1:10513‑M1/246‑178 (MQ=255) aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTACGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCTTGCTCTGCCTGTTCTg > 1:46475‑M1/58‑251 (MQ=255) cAAGATCCNCNNNCNNAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgccccnatatttccagacatcngtnatcanttancccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcac > 2:150710‑M1/1‑48 (MQ=255) cAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTttgatttgcccctatatttccagacatcggttatcacttaacccagtacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcac < 1:150710‑M1/145‑98 (MQ=255) aTCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgccgctgcaaggttctttgctgccggtaacccgtctgttttgggcatgatactgatgtagtcacgctttatcgttttc < 1:36105‑M1/251‑208 (MQ=255) aTCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatcggttatcacttaacccattacaagcccgctgccgcatatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaatgttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttc < 1:164058‑M1/251‑208 (MQ=255) tgagatttgttgtctggagattcagggggccagtctaACATTGTCGAGCTGAAAGTCGCGATTTCGGATTCTGGTTTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATc > 1:207263‑M1/38‑113 (MQ=255) atnnnnnttgnctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCgg > 2:129723‑M1/36‑144 (MQ=255) ccGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatctcttaacccattacaagcccgctgccgcagatattcccgtggcaagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaag < 1:114802‑M1/170‑141 (MQ=255) gATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctg < 1:9690‑M1/58‑31 (MQ=255) gATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctg > 2:9690‑M1/1‑28 (MQ=255) aaCCCGACCGAGCAGGAAATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgc > 1:180105‑M1/1‑21 (MQ=255) gccagtctaACATTATCGATCTGAAATTCGCGATTGCGGAATCTGGTCTCTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTCCCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGCTGTGAACGCCGCAGCCGCTCGTGCTCTGCCTGTTCTGGAGACAATCCCGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCAt < 1:119555‑M1/241‑1 (MQ=255) ggACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctgtgctgccggtaacccgtctggtttgggcatgatactgaggtagtcacgctttatcgttttcacgaagctctctgctattccgttactctccggactcc < 1:187950‑M1/251‑245 (MQ=255) | GTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTGG > NC_000913/4134957‑4135428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |