| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 4,135,180 | IS2 (–) +5 bp | coding (1346‑1350/2181 nt) | katG → | catalase/hydroperoxidase HPI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4135180 = | 0 (0.000) | 9 (0.890) | 7/298 | 0.2 | 100% | coding (1346/2181 nt) | katG | catalase/hydroperoxidase HPI |
| ? | NC_000913 | 4498181 = | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 4135184 | 0 (0.000) | 16 (1.580) | 12/298 | 0.0 | 100% | coding (1350/2181 nt) | katG | catalase/hydroperoxidase HPI |
| ? | NC_000913 | = 4499511 | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
GAAACGTAAACCGACAATGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAG > NC_000913/4134935‑4135422 | gAAACGTAAACCGACAATGCTGGTGACCGACCTGACGCTGCGTTTTGATACTGAGTTCGAGAAGATCTGTCGTCGTTTCCTCAACGATCCGCCGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACTCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGACAGAAGATATGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGCCATTt > 1:170621‑M1/1‑250 (MQ=255) tacgccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaagtgcgatcgtttcctgtgtggtacgccgtcttcgtgtctccggccttaagacaacaatcatctgttccccaatgactagtcgaataacgagtattaatacgatcacttatttaagtgatagtggttgtctggagagtcaggggccagtctaACATTATc > 1:218668‑M1/242‑249 (MQ=255) gctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtcttgagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCt > 1:146549‑M1/217‑251 (MQ=255) ccatgttgccgggcaacgagggagaccgtcatccccggttcaaagcgctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGcgn > 1:47638‑M1/211‑239 (MQ=255) aGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATAGGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcactgaacccattacaagcc < 1:200267‑M1/251‑55 (MQ=255) gtcatccccggttcaaagctctgctgaacaattgtgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTg > 1:91143‑M1/184‑210 (MQ=255) gtTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGCCCGAGCAGGACATTtg > 1:146055‑M1/1‑176 (MQ=255) attgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGTATTCTGGTCTGTCTGTTAGTGAGCTGGTATCTGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGc > 1:162991‑M1/154‑251 (MQ=255) ncccgTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTCCATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccc > 1:27576‑M1/2‑138 (MQ=255) gACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcn < 1:159859‑M1/250‑133 (MQ=255) gCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGCAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtt > 1:169462‑M1/1‑115 (MQ=255) taagacatcaatcatctgttctccaatgaatagtctaaaaactagtattaagactatcacttatttaagtgatcttggttgtctggagattcagggggccagtctaACATTATCGATCTGACATTCGCGATTGCGGATTCTGGTCTGTTTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCAGTGGTGGCGACAAACGCGGTGGTGCCACCGGTGCGCGTCTGGCAtt < 1:251782‑M1/136‑1 (MQ=255) gggCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttata > 1:71907‑M1/1‑102 (MQ=255) tccaatgacaagtctaaagactagttttaagactatcacttatttaagtgattttggatgtctggaaattaagggggccagtctaACATTATAGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTACGTGGTGGAGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAAcgc < 1:201632‑M1/166‑1 (MQ=255) ggCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattan < 1:65404‑M1/129‑50 (MQ=255) caaaactcgtactaagaatatcacttatttcagtgatattggttgtctggagattcagggggcaagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCg < 1:72979‑M1/99‑1 (MQ=255) ggCAAGATCCGCTGCCGCAGCCGATCTACAACCCNACCNNGCNNGANATTtg < 2:146055‑M1/52‑3 (MQ=255) cAAGATCCGCTGCCGCACCCGATCTAGAACCCGACCGACCACGACATTtggatttgcccctatactgccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgt < 1:228891‑M1/123‑76 (MQ=255) aaGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgatctataacccagcgcactaggcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccn < 1:47890‑M1/209‑163 (MQ=255) gCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccag > 1:18517‑M1/1‑37 (MQ=255) aGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttcaagacctctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttc > 1:234329‑M1/1‑32 (MQ=255) cccGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaaaccattacaagcccgctgccgccgatattcccgtggcgagcgataacccagcgcaatatgcggatgccattcgttatactgctcgaccgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttac > 1:34002‑M1/1‑19 (MQ=255) gggccagtctaACATTATCGATCGGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCt > 1:250338‑M1/12‑91 (MQ=255) cgaGCAGGACATTtgtatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatccccgtggcgagcgataacccagctcacgatgctgatgccattcgttataagtctcgaacgccgctgcaaggtgctttgctgccgttaacccgtctggttgtggcatgatatttatttagtcacgctgggtcgttttcacgaagctctctgctattccgttactctccg < 1:146930‑M1/251‑239 (MQ=255) aGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgcggccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctcttctattccgt < 1:207274‑M1/237‑230 (MQ=255) | GAAACGTAAACCGACAATGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAG > NC_000913/4134935‑4135422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |