Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,135,180 IS2 (–) +5 bp coding (1346‑1350/2181 nt) katG → catalase/hydroperoxidase HPI

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4135180 =0 (0.000)39 (1.410) 38/490 0.0 100% coding (1346/2181 nt) katG catalase/hydroperoxidase HPI
?NC_000913 4498181 = NA (NA)noncoding (1/1331 nt) IS2 repeat region
* ? NC_000913 = 41351840 (0.000)34 (1.230) 33/490 0.1 100% coding (1350/2181 nt) katG catalase/hydroperoxidase HPI
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

CGAAGAAACGTAAACCGACAATGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCT  >  NC_000913/4134931‑4135426
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                      
cGAAGAAACGTAAACCGACAATGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGAc                                                                                                                                                                                                                                                       >  1:193525/1‑251 (MQ=255)
cGAAGAAACGTAAACCGACAATGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGGTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGGGCAGGa                                                                                                                                                                                                                                                        <  1:225524/250‑1 (MQ=255)
    gcttacgccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTa                                                                                                                                                                                                                                                   >  1:127629‑M1/246‑251 (MQ=255)
       tacgccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATc                                                                                                                                                                                                                                                 >  1:166475‑M1/243‑250 (MQ=255)
        cacggcggtcgtccgatctctggctgcgacaccatgttaccgggcaacgagggagaccgtcaaccccgggtcaaagctctgctgaacactggcgatcttttccggtgtggtacgccgtctgcgtttcgccggccctaagacatcaatcatctgtgctccaatgactagtctaaaaactagtattgagactatcactgatttaagtgatattggttgtctggagattcagggggccagcctaAgattagcga                                                                                                                                                                                                                                               >  2:26260‑M1/242‑247 (MQ=255)
         cgcnagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccttcatcccctgttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttggctggagattcagggggccagtctaACATTATCGAt                                                                                                                                                                                                                                              >  2:261762‑M1/241‑251 (MQ=255)
            cagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTg                                                                                                                                                                                                                                           >  2:177921‑M1/238‑251 (MQ=255)
                    taactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaaaaattgcgatcttttcctgtgtggtacgacgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTcgc                                                                                                                                                                                                                                   <  1:45592‑M1/22‑1 (MQ=255)
                     ggcTGGTGACCGACCGGACGCTGCGTTTTGAGCCGGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGGCATAtggatgttcccctatatt                                                                                                                                                                                                                                  <  2:165033‑M1/250‑19 (MQ=255)
                           ctggctgctacaccatgttgccgggcaacgagggagaccgtcatccacggttaacagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGa                                                                                                                                                                                                                                               <  1:26260‑M1/10‑1 (MQ=255)
                             accgcccTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagaca                                                                                                                                                                                                                          <  1:55137‑M1/251‑27 (MQ=255)
                                  ccTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgt                                                                                                                                                                                                                     >  1:253963‑M1/1‑220 (MQ=255)
                                     gACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGGGCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttat                                                                                                                                                                                                                  <  1:17830‑M1/251‑35 (MQ=255)
                                       cGCTGCGTTTGAATCTTGAGTTCGAGAAGATCTCTAGGCGTTTCCTCAACGATCCGAAGGCGTTCAACGATGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGACCGAAATCACGCTGCAGCGGGGCGGAAGTTACGAAAGAAGCTCTGATCTGGCAAGATCCGCTGGCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatca                                                                                                                                                                                                                <  2:146901‑M1/251‑37 (MQ=255)
                                                  gATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGCGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccatt                                                                                                                                                                                                     >  1:142170‑M1/1‑204 (MQ=255)
                                                     ccTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGTTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattac                                                                                                                                                                                                   <  2:142170‑M1/250‑50 (MQ=255)
                                                     aacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCt                                                                                                                                                                                                  >  1:21092‑M1/197‑251 (MQ=255)
                                                             cGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct                                                                                                                                                                                          <  2:77884‑M1/251‑59 (MQ=255)
                                                                     atccccggttcaaatctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccgtccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattgattgtctggagattcagtgggccagtctaACATTATCGATCTGAAATTCGCGATTGCTGATTCTGTTCTGTCTGTTAGTGAGCTGTTATCGGTGGCCTgg                                                                                                                                                                                  >  1:110325‑M1/181‑251 (MQ=255)
                                                                       ccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGc                                                                                                                                                                                >  1:125636‑M1/179‑251 (MQ=255)
                                                                                aaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTc                                                                                                                                                                       <  2:38397‑M1/82‑1 (MQ=255)
                                                                                      ctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgctattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGCGAGCTGGTCTCGGCGGCTTGGCCATCTGCTTCTACCtt                                                                                                                                                                 <  2:150679‑M1/88‑1 (MQ=255)
                                                                                           tCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac                                                                                                                                                            >  1:152199‑M1/1‑163 (MQ=255)
                                                                                           gaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCg                                                                                                                                                              >  1:199936‑M1/159‑249 (MQ=255)
                                                                                             acaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCgtggt                                                                                                                                                          <  1:251281‑M1/95‑1 (MQ=255)
                                                                                                   gcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtcttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGCTCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGTCCTGGGAATCTGCTTCTACCTTCCGTGGTGGCGAc                                                                                                                                                    <  2:164500‑M1/101‑1 (MQ=255)
                                                                                                      atcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACaa                                                                                                                                                  <  1:40801‑M1/103‑1 (MQ=255)
                                                                                                        cttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGACTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTc                                                                                                                                                                >  2:84484‑M1/146‑234 (MQ=255)
                                                                                                        cttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGACTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTc                                                                                                                                                                <  1:84484‑M1/89‑1 (MQ=255)
                                                                                                        aaCGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatg                                                                                                                                               >  1:231603‑M1/1‑150 (MQ=255)
                                                                                                        aaCGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCAGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcacctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcacgtggcgagcgataacacagcgcactatg                                                                                                                                               >  2:242572‑M1/1‑150 (MQ=255)
                                                                                                          cGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcg                                                                                                                                             >  1:65374‑M1/1‑148 (MQ=255)
                                                                                                               ccTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggntgc                                                                                                                                        >  2:260960‑M1/1‑143 (MQ=255)
                                                                                                                     cccGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcg                                                                                                                                  >  1:244899‑M1/1‑137 (MQ=255)
                                                                                                                               tgcgtttctccggccctcagacatcaatgatctgttatccactgcctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattccgtgggccagtctaCCATTATCGATCTGAAATTCGCGCTTGCGGATTCTGGTCTGTCTGTTAGTGACCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGCGGTGCCAACGGTGCGCGTc                                                                                                                        <  2:122853‑M1/129‑1 (MQ=255)
                                                                                                                                    aaCTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac                                                                                                                   >  2:10810‑M1/1‑122 (MQ=255)
                                                                                                                                        ccggccctaagacatcaagcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTCCCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTaa                                                                                                               >  2:219444‑M1/114‑251 (MQ=255)
                                                                                                                                                gggATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaagg                                                                                                       >  2:220555‑M1/1‑110 (MQ=255)
                                                                                                                                                     atGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt                                                                                                  >  1:81402‑M1/1‑105 (MQ=255)
                                                                                                                                                       ggggCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGATCAGGACATTtggatttgcccctatatttccagacatctgttatcgcttaacccattacaagcccgctgccgcagatattcccgtggcgagcgatatcccagctctctatgcggatgccattcgttataatgctctaacgcctctgctagggtcttt                                                                                                 <  2:158344‑M1/250‑148 (MQ=255)
                                                                                                                                                               aaTCTGGCTACATCGGGCCTGAAGGGCAGAAAGAAGATCTGATCTGGCAAGATCCGCACCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttagcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgtt                                                                                        <  2:197794‑M1/251‑157 (MQ=255)
                                                                                                                                                                gttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGAtgtg                                                                                        <  1:101684‑M1/161‑1 (MQ=255)
                                                                                                                                                                gttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagagtcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGTCATCTGCTTCTTCCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACGTGGAtgtg                                                                                        >  2:122412‑M1/90‑250 (MQ=255)
                                                                                                                                                                     ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAAc                                                                                     >  2:40801‑M1/85‑248 (MQ=255)
                                                                                                                                                                      caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAAcgccg                                                                                 <  2:200002‑M1/168‑1 (MQ=255)
                                                                                                                                                                        atgactagtctaaaatctagtattaagactatcgcttatttaagtgatattggttgtctggatattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCGTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCGACGGTGCGCGTGTGGCATTAATGCCGTAGCGCGACTGGGGTGTGAACGCCGCa                                                                               >  2:126712‑M1/82‑251 (MQ=255)
                                                                                                                                                                         cATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctg                                                                              >  1:112669‑M1/1‑85 (MQ=255)
                                                                                                                                                                          gactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGc                                                                             >  2:220267‑M1/80‑251 (MQ=255)
                                                                                                                                                                               gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGTGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGTGGCTCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCTCAGCCGTTc                                                                        >  1:29695‑M1/75‑251 (MQ=255)
                                                                                                                                                                                  ggAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggc                                                                      >  1:186974‑M1/1‑76 (MQ=255)
                                                                                                                                                                                    aaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGct                                                                   >  2:101684‑M1/70‑251 (MQ=255)
                                                                                                                                                                                      gTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaagggtctttgctgccgttaacccgtctggtttgggcatgat                                                                 >  2:163198‑M1/1‑72 (MQ=255)
                                                                                                                                                                                          cGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactg                                                             <  2:75355‑M1/251‑184 (MQ=255)
                                                                                                                                                                                                 agactatcgcttatttaagtgatactggttgtctggagattcagggggccagtctaACAGTATCGATCTGAAATTCGCGATTGCGGAGTCTGGTCTGTCTGTTAGGTAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCTTGGTGGCGTCAAACGCGGTGGTGCCATCGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGTGATGGGAACGCCGCAGCCGTGCTTTCTCTGCCTGTTCTgg                                                      >  2:161643‑M1/57‑251 (MQ=255)
                                                                                                                                                                                                 agaTCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagt                                                      <  2:65374‑M1/251‑191 (MQ=255)
                                                                                                                                                                                                    tctgatctgGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcac                                                   >  1:256929‑M1/1‑58 (MQ=255)
                                                                                                                                                                                                    ctatcacttatttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTgg                                                      <  1:179722‑M1/195‑1 (MQ=255)
                                                                                                                                                                                                       gatctgGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgc                                                 <  2:112669‑M1/250‑196 (MQ=255)
                                                                                                                                                                                                        atctgGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctt                                               >  1:205317‑M1/1‑54 (MQ=255)
                                                                                                                                                                                                            ggCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatcctgatgtagtcacgctttatc                                           <  1:10810‑M1/251‑202 (MQ=255)
                                                                                                                                                                                                             atttaagtgatattggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATcc                                             <  1:266127‑M1/204‑1 (MQ=255)
                                                                                                                                                                                                                        tGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgaagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacga                                 >  1:19779‑M1/1‑38 (MQ=255)
                                                                                                                                                                                                                        attggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGt                               >  2:266127‑M1/34‑251 (MQ=255)
                                                                                                                                                                                                                           ggttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTaaa                            >  2:283905‑M1/31‑251 (MQ=255)
                                                                                                                                                                                                                            gttgtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAg                           >  2:236233‑M1/30‑251 (MQ=255)
                                                                                                                                                                                                                               gtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCGTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCt                        >  2:39324‑M1/27‑251 (MQ=255)
                                                                                                                                                                                                                               gtctggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCt                        <  1:196553‑M1/225‑1 (MQ=255)
                                                                                                                                                                                                                                  tggagattcagggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGc                     <  1:20329‑M1/228‑1 (MQ=255)
                                                                                                                                                                                                                                       aCAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgc                       <  1:81716‑M1/244‑222 (MQ=255)
                                                                                                                                                                                                                                       aCAACCCGACCGAGCAGGACATTtggatttgcccctatatttccagacatctgttagcacgtaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactattcggaggccattcgttataaggctcgaacgcctctgcaagggtctgtgctgccgttaacccgtctggtttgggcatgatacggatgtaggcacgctttatcgttttcacgaagctcgctgctattcc                 <  2:114325‑M1/250‑228 (MQ=255)
                                                                                                                                                                                                                                           agggggccagtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGat             <  1:272584‑M1/236‑1 (MQ=255)
                                                                                                                                                                                                                                                    gtctaACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTAGCGGTGGCCTGGGCATCTGCTTCTGCCTTCCGTGGTGGCGACAAACGCGGTGGTGTCAACGGTGCGCGTCTGGCATTAATGCCGCAGCTCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTGCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGc   >  1:30365‑M1/6‑251 (MQ=255)
                                                                                                                                                                                                                                                     cAGGACATTtgaagttgcccctatatatccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaaaccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctccgctattccgttactctccggact  >  2:117955‑M1/1‑9 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                      
CGAAGAAACGTAAACCGACAATGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCT  >  NC_000913/4134931‑4135426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.