Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	4,135,180	IS2 (–) +5 bp	coding (1346‑1350/2181 nt)	katG →	catalase/hydroperoxidase HPI

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4135180 =	0 (0.000)	39 (1.410)	38/490	0.0	100%	coding (1346/2181 nt)	katG	catalase/hydroperoxidase HPI
	?	NC_000913	4498181 =	NA (NA)					noncoding (1/1331 nt)	IS2	repeat region
*	?	NC_000913	= 4135184	0 (0.000)	34 (1.230)	33/490	0.1	100%	coding (1350/2181 nt)	katG	catalase/hydroperoxidase HPI
	?	NC_000913	= 4499511	NA (NA)					noncoding (1331/1331 nt)	IS2	repeat region

GCACTATGATATCCGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4135425‑4135180 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGC  >  NC_000913/4498181‑4498425                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCACTATGATATCCGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGCACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGAGCTGCGGCATTAATGCCAGACGCGCACCGTTGACACCACCGCGTTTGTCGCCACCACGGAAGGCAGAAGCAGATGCCCAGGCCACCGCTACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGAC                                                                                                                                                                                                                                                  >  1:30365/1‑251           ATCCGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCT                                                                                                                                                                                                                                         <  1:272584/250‑1                   GCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCA                                                                                                                                                                                                                                <  1:20329/251‑1                      AGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGAC                                                                                                                                                                                                                             <  1:196553/251‑1                      AGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACACGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGAC                                                                                                                                                                                                                             >  2:39324/1‑251                         CTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAAC                                                                                                                                                                                                                          >  2:236233/1‑251                          TTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACC                                                                                                                                                                                                                         >  2:283905/1‑251                             ACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAAT                                                                                                                                                                                                                      >  2:266127/1‑251                                           GGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAAT                                                                                                                                                                                                           <  1:266127/248‑1                                                    CCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAG                                                                                                                                                                                                  <  1:179722/248‑1                                                    CCAGAACAGGCAGAGAAAGCACGGCTGCGGCGTTCCCATCACAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGATGGCACCACCGCGTTTGACGCCACCAAGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTACCTAACAGACAGACCAGACTCCGCAATCGCGAATTTCAGATCGATACTGTTAGACTGGCCCCCTGAATCTCCAGACAACCAGTATCACTTAAATAAGCGATAGTCT                                                                                                                                                                                               >  2:161643/1‑251                                                                 AGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTT                                                                                                                                                                                  >  2:101684/1‑251                                                                      GAACGGCTGAGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGAGCCACGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCACAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGAC                                                                                                                                                                             >  1:29695/1‑251                                                                           GCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTC                                                                                                                                                                        >  2:220267/1‑251                                                                             TGCGGCGTTCACACCCCAGTCGCGCTACGGCATTAATGCCACACGCGCACCGTCGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGACGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATATCCAGACAACCAATATCACTTAAATAAGCGATAGTCTTAATACTAGATTTTAGACTAGTCAT                                                                                                                                                                      >  2:126712/1‑251                                                                               CGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTG                                                                                                                                                                    <  2:200002/251‑1                                                                                   GTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGG                                                                                                                                                                   >  2:40801/1‑248                                                                                      CACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAAC                                                                                                                                                              <  1:101684/250‑1                                                                                      CACATCCACGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGAAGAAGCAGATGACCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGACTCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAAC                                                                                                                                                              >  2:122412/1‑250                                                                                                             TTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGGAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGCTTGATGTCTTAGGGCCGG                                                                                                                                      >  2:219444/1‑251                                                                                                                      GACGCGCACCGTTGGCACCGCCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGGTCACTAACAGACAGACCAGAATCCGCAAGCGCGAATTTCAGATCGATAATGGTAGACTGGCCCACGGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGGCAGTGGATAACAGATCATTGATGTCTGAGGGCCGGAGAAACGCA                                                                                                                             <  2:122853/251‑1                                                                                                                                                TTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGAT                                                                                                    <  1:40801/250‑1                                                                                                                                                  GTCGCCACCACGGAAGGTAGAAGCAGATTCCCAGGACACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGAGCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAAGACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGC                                                                                                 <  2:164500/251‑1                                                                                                                                                        ACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGT                                                                                           <  1:251281/251‑1                                                                                                                                                            CGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTC                                                                                         >  1:199936/1‑249                                                                                                                                                              GAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAGTCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAG                                                                                                      >  2:84484/1‑234                                                                                                                                                              GAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAGTCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAG                                                                                                      <  1:84484/234‑1                                                                                                                                                               AAGGTAGAAGCAGATGGCCAAGCCGCCGAGACCAGCTCGCTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATAGCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAG                                                                                    <  2:150679/251‑1                                                                                                                                                                     GAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTT                                                                              <  2:38397/251‑1                                                                                                                                                                              GCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGG                                                                     >  1:125636/1‑251                                                                                                                                                                                CCAGGCCACCGATAACAGCTCACTAACAGACAGAACAGAATCAGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCACTGAATCTCCAGACAATCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGACGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGATTTGAACCGGGGAT                                                                   >  1:110325/1‑251                                                                                                                                                                                                AGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTT                                                   >  1:21092/1‑251                                                                                                                                                                                                                                 GCGAATTTCAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGTCGTACCACACAGGAAAAGATCGCAATTTTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTA                  <  1:45592/251‑1                                                                                                                                                                                                                                         CAGATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTG          >  2:177921/1‑251                                                                                                                                                                                                                                            ATCGATAATGTTAGACTGGCCCCCTGAATCTCCAGCCAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACAGGGGATGAAGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTNGCG       >  2:261762/1‑251                                                                                                                                                                                                                                             tcgcTAATCTTAGGCTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATCAGTGATAGTCTCAATACTAGTTTTTAGACTAGTCATTGGAGCACAGATGATTGATGTCTTAGGGCCGGCGAAACGCAGACGGCGTACCACACCGGAAAAGATCGCCAGTGTTCAGCAGAGCTTTGACCCGGGGTTGACGGTCTCCCTCGTTGCCCGGTAACATGGTGTCGCAGCCAGagatcggacgaccgccgtg      >  2:26260/5‑232                                                                                                                                                                                                                                             TCGATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTGTTAACCGTGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAG                         <  1:26260/232‑1                                                                                                                                                                                                                                               GATAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTA     >  1:166475/1‑250                                                                                                                                                                                                                                                 TAATGTTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGC  >  1:127629/1‑251                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCACTATGATATCCGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCTGCGGCGTTCACATCCCAGTCGCGCTGCGGCATTAATGCCAGACGCGCACCGTTGGCACCACCGCGTTTGTCGCCACCACGGAAGGTAGAAGCAGATGCCCAGGCCACCGATACCAGCTCACTAACAGACAGACCAGAATCCGCAATCGCGAATTTCAGATCGATAATGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4135425‑4135180 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGC  >  NC_000913/4498181‑4498425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.