| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,351,171 | Δ239,229 bp | ycjD–ydeT | 230 genes ycjD, sapF, sapD, sapC, sapB, sapA, ymjA, puuP, ymjE, puuA, puuD, puuR, puuC, puuB, puuE, pspF, pspA, pspB, pspC, pspD, pspE, ycjM, ycjN, ycjO, ycjP, ycjQ, ycjR, ycjS, ycjT, ycjU, ompG, ycjW, ycjX, ycjF, tyrR, tpx, ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI, insH4, ynaJ, uspE, fnr, ogt, abgT, abgB, abgA, abgR, mcaS, smrA, dgcM, ynaN, zntB, fnrS, ynaL, dbpA, ttcA, intR, xisR, rcbA, ralA, ralR, recT, recE, racC, ydaE, kilR, kilS, sieB, ydaF, ydaG, racR, ydaS, ydaT, ydaU, ydaV, ydaW, rzoR, trkG, ynaK, ydaY, ynaA, lomR, insH5, lomR, stfR, tfaR, pinR, ynaE, ynaM, uspF, ompN, micC, ydbK, ydbJ, hslJ, ldhA, ydbH, ynbE, ydbL, feaR, feaB, tynA, paaZ, paaA, paaB, paaC, paaD, paaE, paaF, paaG, paaH, paaI, paaJ, paaK, paaX, paaY, ynbG, ydbA, insD2, insC2, ydbA, insI2, ydbA, pdxI, ydbD, ynbA, ynbB, ynbC, ynbD, azoR, hrpA, ydcF, aldA, cybB, rydC, ydcA, yncP, hokB, mokB, sokB, trg, ydcI, ydcJ, opgD, ydcH, rimL, ydcK, tehA, tehB, ydcL, insQ, ydcO, sutR, rlhA, yncJ, hicA, hicB, ydcR, ydcS, ydcT, ydcU, ydcV, patD, yncL, ortT, ydcY, ydcZ, mnaT, curA, mcbR, yncD, yncE, ansP, yncG, yncH, ydcD, yncO, ydcC, pptA, yddH, nhoA, yddE, narV, narW, narY, narZ, narU, yddK, yddL, yddG, fdnG, fdnH, fdnI, yddM, adhP, maeA, sra, bdm, osmC, ddpF, ddpD, ddpC, ddpB, ddpA, ddpX, dosP, dosC, yddY, digH, gadC, gadB, pqqL, yddB, yddA, yneP, ydeM, ydeN, ydeO, safA, ydeP, ydeQ, ydeR, ydeS, ydeT |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1351171 | 1590399 | 239229 | 73 [0] | [1] 75 | ycjD–ydeT | ycjD,sapF,sapD,sapC,sapB,sapA,ymjA,puuP,ymjE,puuA,puuD,puuR,puuC,puuB,puuE,pspF,pspA,pspB,pspC,pspD,pspE,ycjM,ycjN,ycjO,ycjP,ycjQ,ycjR,ycjS,ycjT,ycjU,ompG,ycjW,ycjX,ycjF,tyrR,tpx,ycjG,mpaA,ymjC,ymjD,ycjY,pgrR,mppA,ynaI,insH4,ynaJ,uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,ynaN,zntB,fnrS,ynaL,dbpA,ttcA,intR,xisR,rcbA,ralA,ralR,recT,recE,racC,ydaE,kilR,kilS,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzoR,trkG,ynaK,ydaY,ynaA,lomR,insH5,lomR,stfR,tfaR,pinR,ynaE,ynaM,uspF,ompN,micC,ydbK,ydbJ,hslJ,ldhA,ydbH,ynbE,ydbL,feaR,feaB,tynA,paaZ,paaA,paaB,paaC,paaD,paaE,paaF,paaG,paaH,paaI,paaJ,paaK,paaX,paaY,ynbG,ydbA,insD2,insC2,ydbA,insI2,ydbA,pdxI,ydbD,ynbA,ynbB,ynbC,ynbD,azoR,hrpA,ydcF,aldA,cybB,rydC,ydcA,yncP,hokB,mokB,sokB,trg,ydcI,ydcJ,opgD,ydcH,rimL,ydcK,tehA,tehB,ydcL,insQ,ydcO,sutR,rlhA,yncJ,hicA,hicB,ydcR,ydcS,ydcT,ydcU,ydcV,patD,yncL,ortT,ydcY,ydcZ,mnaT,curA,mcbR,yncD,yncE,ansP,yncG,yncH,ydcD,yncO,ydcC,pptA,yddH,nhoA,yddE,narV,narW,narY,narZ,narU,yddK,yddL,yddG,fdnG,fdnH,fdnI,yddM,adhP,maeA,sra,bdm,osmC,ddpF,ddpD,ddpC,ddpB,ddpA,ddpX,dosP,dosC,yddY,digH,gadC,gadB,pqqL,yddB,yddA,yneP,ydeM,ydeN,ydeO,safA,ydeP,ydeQ,ydeR,ydeS,ydeT |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1351170 | 0 (0.000) | 73 (0.780) | 66/472 | 0.1 | 100% | intergenic (‑131/+237) | fabI/ycjD | enoyl‑[acyl‑carrier‑protein] reductase/DUF559 domain‑containing protein YcjD |
| ? | NC_000913 | 1590400 = | 0 (0.000) | intergenic (‑399/+454) | ydeT/hipA | fimbrial usher domain‑containing protein YdeT/serine/threonine‑protein kinase toxin HipA | |||||
ATTATGCATGTTATTTATAAACCGTGACTAAACAGAATATTATTGCGAACAAGGGAAGTGTCAGGAAAGGTCAAGAGCTACCAATGGTTAATATGGCTATAAATCATTAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGTTTATTAAAGCTGTCCGACAGACTTTCTTAACCTGGTAATATCTCTCTTGGGTGACTCTCCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTT > NC_000913/1590158‑1590650 | gaatgccagttcagctccttcgcggtgcatcgcctgagcgatacagtaggcgatggatactttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTc > 2:115699‑M2/243‑251 (MQ=255) atgccagttcagctccttcgcggtgcatcgcctgagcgataccgtaggcgatggatagtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTccc < 1:393569‑M2/11‑1 (MQ=255) cgcggtgcatcgcctgagcgataccgtaggcgatggatagtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCt < 2:248308‑M2/29‑1 (MQ=255) catcgcctgagcgataccgtaggcgatggatagtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTaa < 2:7755‑M2/36‑1 (MQ=255) atcgcctgagcgataccgtaggcgatggatagtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAAc < 1:599831‑M2/37‑1 (MQ=255) cctgagggataccgtaggcgatggatagtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaagcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGAc < 2:266609‑M2/41‑1 (MQ=255) cgatggatagtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCtgtggg > 1:201428‑M2/193‑250 (MQ=255) atggatagtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTgtggtg > 2:102217‑M2/191‑250 (MQ=255) agtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCg < 1:149014‑M2/66‑1 (MQ=255) gtttgctggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCgtn < 2:325627‑M2/68‑2 (MQ=255) ggcaacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGttca < 1:395678‑M2/75‑1 (MQ=255) aacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTa < 2:609124‑M2/68‑1 (MQ=255) aacaccggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTa > 1:609124‑M2/174‑241 (MQ=255) accggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGc > 1:301301‑M2/171‑251 (MQ=255) cggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattacaatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCAt < 1:90952‑M2/83‑1 (MQ=255) ggttaccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATc > 2:402074‑M2/168‑251 (MQ=255) accagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTc < 1:531650‑M2/88‑1 (MQ=255) ccagaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCg > 1:109371‑M2/163‑251 (MQ=255) ngaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGcc > 2:308899‑M2/161‑251 (MQ=255) gaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCt > 1:468378‑M2/160‑251 (MQ=255) gaatgcgcttaccggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCt > 1:578639‑M2/160‑251 (MQ=255) cttaccggaaagcaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTc > 1:488564‑M2/153‑250 (MQ=255) accggaaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCAtt < 2:661283‑M2/101‑1 (MQ=255) aaagaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACg > 1:432789‑M2/145‑251 (MQ=255) gaaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAg < 2:335187‑M2/110‑1 (MQ=255) aaaacccatagctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGc < 2:686647‑M2/111‑1 (MQ=255) tagctttaatccttattgttgatgcttgttgtgcctgacaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTctt > 2:525305‑M2/133‑250 (MQ=255) agctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTg < 1:402074‑M2/119‑1 (MQ=255) ctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATg < 1:455540‑M2/21‑1 (MQ=255) ctttaatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATg > 2:455540‑M2/130‑150 (MQ=255) taatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGttcattc > 1:504732‑M2/127‑204 (MQ=255) taatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTAATACCg > 2:86060‑M2/127‑251 (MQ=255) taatccttattgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACAGCGTAATGttcattc < 2:504732‑M2/78‑1 (MQ=255) attgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACt < 1:90346‑M2/96‑1 (MQ=255) attgttgatgcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACt > 2:90346‑M2/119‑214 (MQ=255) gcttgttgtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCg > 2:239734‑M2/110‑251 (MQ=255) gtgcctgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGAt < 2:201428‑M2/148‑1 (MQ=255) tgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCAtt > 1:559791‑M2/98‑212 (MQ=255) tgaaaatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCAtt < 2:559791‑M2/115‑1 (MQ=255) aatcaggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTa > 1:486219‑M2/94‑250 (MQ=255) caggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAAt > 2:666205‑M2/91‑250 (MQ=255) aggcgattcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATa > 1:208534‑M2/90‑250 (MQ=255) attcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATcc > 1:401219‑M2/85‑234 (MQ=255) attcgtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATcc < 2:401219‑M2/150‑1 (MQ=255) gtcgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGCATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGc > 2:547167‑M2/81‑250 (MQ=255) cgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCAcc > 2:620608‑M2/79‑251 (MQ=255) cgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCAcc > 1:613888‑M2/79‑251 (MQ=255) cgttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCAcc < 2:488564‑M2/173‑1 (MQ=255) gttttagtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCAccc < 1:86060‑M2/174‑1 (MQ=255) tttagtcaacagtacgaacagataaccggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGAATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGACGCCTGCCTTCATTGAGACGTAGCCATTTCTTCTATCGGAGTGGAATCATTCCAGCTTGCTCCGTCCTTATATAATGAAAAGCACCct > 2:454499‑M2/76‑250 (MQ=255) gtaaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGgt < 1:666205‑M2/180‑1 (MQ=255) aaacagtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGgtgt > 1:639963‑M2/70‑251 (MQ=255) aacagtacgaacagataaacgattattataatcaacctggctgtgagtagctatagttgccaggtccgCAAATATTCCCGACTAAAATGTGATAGCTTCCGTAACCGACATCATAGTCTGCTGTAGTGACATCGTAATTTTCATTCAGCATCTGTCGCCTGACTTCATTTAGACTTACCCATTTCTGATACCGGATTTGACTCATTCCCGCTTGATCCGTCCTTAAATAAATAACagcaccctcttatgtn < 2:312907‑M2/183‑7 (MQ=255) agtacgaacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTc < 2:301301‑M2/186‑1 (MQ=255) cgaccagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTAt < 2:116919‑M2/190‑1 (MQ=255) aacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGc > 1:327282‑M2/60‑251 (MQ=255) aacagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGc > 1:39346‑M2/60‑251 (MQ=255) cagataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGc > 2:366531‑M2/58‑249 (MQ=255) gataaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAgtg < 2:486219‑M2/196‑1 (MQ=255) aaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTgaga < 2:4000‑M2/105‑1 (MQ=255) aaacggttattataatcaacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTgaga > 1:4000‑M2/53‑157 (MQ=255) ataatcaacctggctgtgagtagatatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCgacagac > 1:211950‑M2/42‑251 (MQ=255) caacctggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTgc > 1:76542‑M2/37‑251 (MQ=255) ggctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGctct < 1:274103‑M2/220‑1 (MQ=255) gctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCctc < 1:82270‑M2/176‑1 (MQ=255) gctgtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCctc > 2:82270‑M2/30‑205 (MQ=255) gtgagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCa < 2:48329‑M2/225‑1 (MQ=255) gagtagctatagttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATg > 2:126676‑M2/25‑251 (MQ=255) gttgccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCGTCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAAt > 1:69950‑M2/14‑251 (MQ=255) gccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTccc > 1:132922‑M2/11‑151 (MQ=255) gccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTccc < 2:132922‑M2/141‑1 (MQ=255) gccaggtccgCGAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATaa < 2:109371‑M2/240‑1 (MQ=255) ccaggtccgCGAATATTCCCGGCTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGAGCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGGTTTCGTATGCAGTGTCTATGCGACAGACACTGCGTTCTTAGCATGGGGCAGGGAATAAcc < 2:211950‑M2/242‑1 (MQ=255) cgcgAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTAt < 1:102217/251‑1 (MQ=255) cgAATATTCCCGACTGAAATGGGATAGCTTCCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAAGAACCAGGCTAttt < 1:525305/251‑1 (MQ=255) | ATTATGCATGTTATTTATAAACCGTGACTAAACAGAATATTATTGCGAACAAGGGAAGTGTCAGGAAAGGTCAAGAGCTACCAATGGTTAATATGGCTATAAATCATTAGCTATGGTTAATGTTTGCTTGCTGAAACTAACACCGAATTGCTCTAAACAGATAAGTGCAGGGTTTATTAAAGCTGTCCGACAGACTTTCTTAACCTGGTAATATCTCTCTTGGGTGACTCTCCAAACATCCGCGAATATTCCCGACTGAAATGGGATAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTTTCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTT > NC_000913/1590158‑1590650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |