| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,351,171 | Δ239,229 bp | ycjD–ydeT | 230 genes ycjD, sapF, sapD, sapC, sapB, sapA, ymjA, puuP, ymjE, puuA, puuD, puuR, puuC, puuB, puuE, pspF, pspA, pspB, pspC, pspD, pspE, ycjM, ycjN, ycjO, ycjP, ycjQ, ycjR, ycjS, ycjT, ycjU, ompG, ycjW, ycjX, ycjF, tyrR, tpx, ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI, insH4, ynaJ, uspE, fnr, ogt, abgT, abgB, abgA, abgR, mcaS, smrA, dgcM, ynaN, zntB, fnrS, ynaL, dbpA, ttcA, intR, xisR, rcbA, ralA, ralR, recT, recE, racC, ydaE, kilR, kilS, sieB, ydaF, ydaG, racR, ydaS, ydaT, ydaU, ydaV, ydaW, rzoR, trkG, ynaK, ydaY, ynaA, lomR, insH5, lomR, stfR, tfaR, pinR, ynaE, ynaM, uspF, ompN, micC, ydbK, ydbJ, hslJ, ldhA, ydbH, ynbE, ydbL, feaR, feaB, tynA, paaZ, paaA, paaB, paaC, paaD, paaE, paaF, paaG, paaH, paaI, paaJ, paaK, paaX, paaY, ynbG, ydbA, insD2, insC2, ydbA, insI2, ydbA, pdxI, ydbD, ynbA, ynbB, ynbC, ynbD, azoR, hrpA, ydcF, aldA, cybB, rydC, ydcA, yncP, hokB, mokB, sokB, trg, ydcI, ydcJ, opgD, ydcH, rimL, ydcK, tehA, tehB, ydcL, insQ, ydcO, sutR, rlhA, yncJ, hicA, hicB, ydcR, ydcS, ydcT, ydcU, ydcV, patD, yncL, ortT, ydcY, ydcZ, mnaT, curA, mcbR, yncD, yncE, ansP, yncG, yncH, ydcD, yncO, ydcC, pptA, yddH, nhoA, yddE, narV, narW, narY, narZ, narU, yddK, yddL, yddG, fdnG, fdnH, fdnI, yddM, adhP, maeA, sra, bdm, osmC, ddpF, ddpD, ddpC, ddpB, ddpA, ddpX, dosP, dosC, yddY, digH, gadC, gadB, pqqL, yddB, yddA, yneP, ydeM, ydeN, ydeO, safA, ydeP, ydeQ, ydeR, ydeS, ydeT |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1351171 | 1590399 | 239229 | 73 [0] | [1] 75 | ycjD–ydeT | ycjD,sapF,sapD,sapC,sapB,sapA,ymjA,puuP,ymjE,puuA,puuD,puuR,puuC,puuB,puuE,pspF,pspA,pspB,pspC,pspD,pspE,ycjM,ycjN,ycjO,ycjP,ycjQ,ycjR,ycjS,ycjT,ycjU,ompG,ycjW,ycjX,ycjF,tyrR,tpx,ycjG,mpaA,ymjC,ymjD,ycjY,pgrR,mppA,ynaI,insH4,ynaJ,uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,ynaN,zntB,fnrS,ynaL,dbpA,ttcA,intR,xisR,rcbA,ralA,ralR,recT,recE,racC,ydaE,kilR,kilS,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzoR,trkG,ynaK,ydaY,ynaA,lomR,insH5,lomR,stfR,tfaR,pinR,ynaE,ynaM,uspF,ompN,micC,ydbK,ydbJ,hslJ,ldhA,ydbH,ynbE,ydbL,feaR,feaB,tynA,paaZ,paaA,paaB,paaC,paaD,paaE,paaF,paaG,paaH,paaI,paaJ,paaK,paaX,paaY,ynbG,ydbA,insD2,insC2,ydbA,insI2,ydbA,pdxI,ydbD,ynbA,ynbB,ynbC,ynbD,azoR,hrpA,ydcF,aldA,cybB,rydC,ydcA,yncP,hokB,mokB,sokB,trg,ydcI,ydcJ,opgD,ydcH,rimL,ydcK,tehA,tehB,ydcL,insQ,ydcO,sutR,rlhA,yncJ,hicA,hicB,ydcR,ydcS,ydcT,ydcU,ydcV,patD,yncL,ortT,ydcY,ydcZ,mnaT,curA,mcbR,yncD,yncE,ansP,yncG,yncH,ydcD,yncO,ydcC,pptA,yddH,nhoA,yddE,narV,narW,narY,narZ,narU,yddK,yddL,yddG,fdnG,fdnH,fdnI,yddM,adhP,maeA,sra,bdm,osmC,ddpF,ddpD,ddpC,ddpB,ddpA,ddpX,dosP,dosC,yddY,digH,gadC,gadB,pqqL,yddB,yddA,yneP,ydeM,ydeN,ydeO,safA,ydeP,ydeQ,ydeR,ydeS,ydeT |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1351170 | 0 (0.000) | 73 (0.780) | 66/472 | 0.1 | 100% | intergenic (‑131/+237) | fabI/ycjD | enoyl‑[acyl‑carrier‑protein] reductase/DUF559 domain‑containing protein YcjD |
| ? | NC_000913 | 1590400 = | 0 (0.000) | intergenic (‑399/+454) | ydeT/hipA | fimbrial usher domain‑containing protein YdeT/serine/threonine‑protein kinase toxin HipA | |||||
GAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGACCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAGCTATTCGGCTCGGTCTGCCCCCTCGCTCTTTCAGGG > NC_000913/1350929‑1351412 | gAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACAGTAGGCGATGGATACTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattc > 2:115699‑M1/1‑242 (MQ=255) aTGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattccc < 1:393569‑M1/251‑12 (MQ=255) cgcgGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagct < 2:248308‑M1/251‑30 (MQ=255) cATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaa < 2:7755‑M1/251‑37 (MQ=255) aTCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaac < 1:599831‑M1/251‑38 (MQ=255) ccTGAGGGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAAGCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgac < 2:266609‑M1/251‑42 (MQ=255) cGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggg > 1:201428‑M1/1‑192 (MQ=255) aTGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtg > 2:102217‑M1/1‑190 (MQ=255) aGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcg < 1:149014‑M1/250‑67 (MQ=255) gTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtn < 2:325627‑M1/251‑69 (MQ=255) ggCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttca < 1:395678‑M1/251‑76 (MQ=255) aaCACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgta < 2:609124‑M1/241‑69 (MQ=255) aaCACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgta > 1:609124‑M1/1‑173 (MQ=255) acCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagc > 1:301301‑M1/1‑170 (MQ=255) cGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTACAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcat < 1:90952‑M1/251‑84 (MQ=255) ggTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatc > 2:402074‑M1/1‑167 (MQ=255) aCCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtc < 1:531650‑M1/251‑89 (MQ=255) ccAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcg > 1:109371‑M1/1‑162 (MQ=255) ngaATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcc > 2:308899‑M1/2‑160 (MQ=255) gAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcct > 1:468378‑M1/1‑159 (MQ=255) gAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcct > 1:578639‑M1/1‑159 (MQ=255) cTTACCGGAAAGCAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttc > 1:488564‑M1/1‑152 (MQ=255) aCCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcatt < 2:661283‑M1/250‑102 (MQ=255) aaagaaaACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacg > 1:432789‑M1/1‑144 (MQ=255) gaaaACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtag < 2:335187‑M1/251‑111 (MQ=255) aaaaCCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagc < 2:686647‑M1/251‑112 (MQ=255) tAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGACAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctt > 2:525305‑M1/1‑132 (MQ=255) aGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctg < 1:402074‑M1/250‑120 (MQ=255) cTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatg > 2:455540‑M1/1‑129 (MQ=255) cTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatg < 1:455540‑M1/150‑22 (MQ=255) tAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctaataccg > 2:86060‑M1/1‑126 (MQ=255) tAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattc > 1:504732‑M1/1‑126 (MQ=255) tAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacagcgtaatgttcattc < 2:504732‑M1/204‑79 (MQ=255) aTTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgact > 2:90346‑M1/1‑118 (MQ=255) aTTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgact < 1:90346‑M1/214‑97 (MQ=255) gCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccg > 2:239734‑M1/1‑109 (MQ=255) gtgCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgat < 2:201428‑M1/250‑149 (MQ=255) tGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatt < 2:559791‑M1/212‑116 (MQ=255) tGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatt > 1:559791‑M1/1‑97 (MQ=255) aaTCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtcctta > 1:486219‑M1/1‑93 (MQ=255) cAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaat > 2:666205‑M1/1‑90 (MQ=255) aGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaata > 1:208534‑M1/1‑89 (MQ=255) aTTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatcc < 2:401219‑M1/234‑151 (MQ=255) aTTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatcc > 1:401219‑M1/1‑84 (MQ=255) gtcgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgcatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagc > 2:547167‑M1/1‑80 (MQ=255) cgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcacc > 2:620608‑M1/1‑78 (MQ=255) cgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcacc < 2:488564‑M1/251‑174 (MQ=255) cgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcacc > 1:613888‑M1/1‑78 (MQ=255) gtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccc < 1:86060‑M1/251‑175 (MQ=255) tttAGTCAACAGTACGAACAGATAACCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagaataggctgctgtggtgacatcgtaatgttcattcagcatctgacgcctgccttcattgagacgtagccatttcttctatcggagtggaatcattccagcttgctccgtccttatataatgaaaagcaccct > 2:454499‑M1/1‑75 (MQ=255) gTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggt < 1:666205‑M1/251‑181 (MQ=255) aaaCAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgt > 1:639963‑M1/1‑69 (MQ=255) aaCAGTACGAACAGATAAACGATTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcaaatattcccgactaaaatgtgatagcttccgtaaccgacatcatagtctgctgtagtgacatcgtaattttcattcagcatctgtcgcctgacttcatttagacttacccatttctgataccggatttgactcattcccgcttgatccgtccttaaataaataacagcaccctcttatgtn < 2:312907‑M1/251‑184 (MQ=255) aGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttc < 2:301301‑M1/251‑187 (MQ=255) cgaccagatAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtat < 2:116919‑M1/247‑191 (MQ=255) aaCAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgc > 1:39346‑M1/1‑59 (MQ=255) aaCAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgc > 1:327282‑M1/1‑59 (MQ=255) cAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgc > 2:366531‑M1/1‑57 (MQ=255) gATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtg < 2:486219‑M1/251‑197 (MQ=255) aaaCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgaga < 2:4000‑M1/157‑106 (MQ=255) aaaCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgaga > 1:4000‑M1/1‑52 (MQ=255) ataATCAACCTGGCTGTGAGTAGATATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagac > 1:211950‑M1/1‑41 (MQ=255) cAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgc > 1:76542‑M1/1‑36 (MQ=255) ggCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctct < 1:274103‑M1/250‑221 (MQ=255) gCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctc > 2:82270‑M1/1‑29 (MQ=255) gCTGTGAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctc < 1:82270‑M1/205‑177 (MQ=255) gtgAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagca < 2:48329‑M1/251‑226 (MQ=255) gAGTAGCTATAGTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatg > 2:126676‑M1/1‑24 (MQ=255) gTTGCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcgtctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaat > 1:69950‑M1/1‑13 (MQ=255) gCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgatccgtccttaaataagtaacagcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataa < 2:109371‑M1/250‑241 (MQ=255) gCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattccc < 2:132922‑M1/151‑142 (MQ=255) gCCAGGTCCGcgaatattcccgactgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattccc > 1:132922‑M1/1‑10 (MQ=255) ccAGGTCCGcgaatattcccggctgaaatgggatagcttccgtaaccgacagcataggctgctgtggtgacatcgtaatgttcattcagcatctgtcgcctgacttcattgagacgtagccatttctgataccggagtggactcattcccgcttgagccgtccttaaataagtaacagcaccctctggtggtttcgtatgcagtgtctatgcgacagacactgcgttcttagcatggggcagggaataacc < 2:211950‑M1/251‑243 (MQ=255) | GAATGCCAGTTCAGCTCCTTCGCGGTGCATCGCCTGAGCGATACCGTAGGCGATGGATAGTTTGCTGGCAACACCGGTTACCAGAATGCGCTTACCGGAAAGAAAACCCATAGCTTTAATCCTTATTGTTGATGCTTGTTGTGCCTGAAAATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGACCGTATTGTGCAAATATTGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAGCTATTCGGCTCGGTCTGCCCCCTCGCTCTTTCAGGG > NC_000913/1350929‑1351412 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |