| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,756,415 | Δ57,799 bp | [intA]–emrB | 53 genes [intA], yfjH, alpA, yfjI, yfjJ, abpB, abpA, yfjM, rnlA, rnlB, yfjP, yfjQ, yfjR, ypjK, yfjS, yfjT, yfjU, yfjW, yfjX, yfjY, ypjJ, yfjZ, ypjF, ypjA, ypjB, ypjC, ileY, glaH, lhgD, gabD, gabT, gabP, glaR, kbp, yqaE, ygaV, ygaP, stpA, alaE, ygaC, ygaM, nrdH, nrdI, nrdE, nrdF, proV, proW, proX, ygaZ, ygaH, mprA, emrA, emrB |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2756415 | 2814213 | 57799 | 81 [0] | [1] 82 | [intA]–emrB | [intA],yfjH,alpA,yfjI,yfjJ,abpB,abpA,yfjM,rnlA,rnlB,yfjP,yfjQ,yfjR,ypjK,yfjS,yfjT,yfjU,yfjW,yfjX,yfjY,ypjJ,yfjZ,ypjF,ypjA,ypjB,ypjC,ileY,glaH,lhgD,gabD,gabT,gabP,glaR,kbp,yqaE,ygaV,ygaP,stpA,alaE,ygaC,ygaM,nrdH,nrdI,nrdE,nrdF,proV,proW,proX,ygaZ,ygaH,mprA,emrA,emrB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2756414 | 0 (0.000) | 81 (1.460) | 77/488 | 0.0 | 100% | coding (256/1242 nt) | intA | integrase IntA |
| ? | NC_000913 | 2814214 = | 0 (0.000) | intergenic (+60/+4) | emrB/luxS | multidrug efflux pump membrane subunit EmrB/S‑ribosylhomocysteine lyase | |||||
CCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACATTGATCCTCAGGAACATCAGAAAGAACAGGTGAGGAATTCTCAAGAGGCCAAAACCAATACCTTCTTGTTAGTTGCCGAGCGTTGGTGGAATGTGAAGAAAACCAGCGTAACAGAGGACTATGCCGACGATATCTGGCGCTCGCTTGAGAGAGATATTTTCCCGGCAATCGGTGATATCAGTATCACTGAGATTAAGGCTCATACTCTGGTTAAAGCAGTTCAGCCGGTTCAGGCCAGAGGTGCATTA > NC_000913/2756172‑2756662 | ccAAGCCGTTAACTGATACGGCAATCCAAGCCGCCAAACCTCAAGATGCCGATTACCAGCTTTATGACGGTGAAGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGAAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGCACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgact > 2:289605‑M1/1‑243 (MQ=255) cAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATGGGCGAAAGACActgactaga < 2:365257‑M1/251‑10 (MQ=255) aaGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgact > 1:93027‑M1/1‑241 (MQ=255) tAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAAGCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcag < 1:197137‑M1/250‑17 (MQ=255) aCTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTACGAGCCGAATCTAAAGTTTTATTGGCGAACGACActgactagctgtgcagttc > 2:416859‑M1/1‑232 (MQ=255) gATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctg < 1:373821‑M1/251‑23 (MQ=255) aaaTCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActtactagatgtgcagttccttcaacttt > 2:102593‑M1/1‑222 (MQ=255) cAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGGGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAGTTCCGTTACTATCGGCCTTTGACCAAGCAGCAAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTGTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctct < 1:225765‑M1/250‑33 (MQ=255) aaGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttc > 2:339261‑M1/1‑216 (MQ=255) aGCCGCCAAACCTACAGACGCCGATTACCAGCTTTATGACGGTGACCGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATTCACGTAAACTCAGAGCCGGATCTAAAGTTTTATTGGCTAAAGACActgactagatgtgcagttcctgcaacttctctttcg > 2:109139‑M1/1‑215 (MQ=255) cAAACCTAAAGCTGCCGATTACCAGCTTTATGACGGTGACGGGCTTAATCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCCTTGACCCAGCAGCGAACCCAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAAATCCGAGCCGACTCTAAAGTTTTATTGGCGAAAGCCActgactagatgtgccgtttctgcaacttctctttcggccgtg > 2:78677‑M1/1‑209 (MQ=255) cAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtg < 1:92000‑M1/251‑43 (MQ=255) aaaCCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTCTCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGCCActgactagctgtgcagttcctgcacctttgctttaggcagcgc > 2:18936‑M1/1‑208 (MQ=255) aaaCCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAACGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcattgc > 1:263370‑M1/1‑208 (MQ=255) aaaCCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctatttcggcagtgg > 2:334777‑M1/1‑208 (MQ=255) aCCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgcca < 2:21460‑M1/251‑46 (MQ=255) aGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgggcagttcctgcaccttctctttcggcagtgccagttctt > 2:359342‑M1/1‑200 (MQ=255) gATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttattt > 2:263974‑M1/1‑199 (MQ=255) gATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgct < 1:297103‑M1/251‑59 (MQ=255) gATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgct < 1:263974‑M1/251‑59 (MQ=255) gATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAAACAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgacagttcttcgttgct > 2:92972‑M1/1‑193 (MQ=255) tACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTCAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgtt > 1:52234‑M1/1‑190 (MQ=255) cAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgat < 2:140456‑M1/251‑65 (MQ=255) cAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaac < 2:145191‑M1/213‑27 (MQ=255) cAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaac > 1:145191‑M1/1‑187 (MQ=255) aTGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacg > 1:321860‑M1/1‑180 (MQ=255) gtgacggGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgt < 1:217036‑M1/251‑78 (MQ=255) gacggGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcggtgctgttgatgcgtccgtcacgttc > 2:131662‑M1/1‑172 (MQ=255) acggGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttcc < 2:161646‑M1/251‑81 (MQ=255) acggGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCCTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttcc > 2:338422‑M1/1‑171 (MQ=255) ggCTTACTCTGTTAATCCCGTACAGTGGCAGTAAGCTTTGGCAATTCCGTTAATCTCGGCCTTTGACCCAGCAGCGAAACAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgatgttgatgcgtacgtcccgttcc > 2:136030‑M1/1‑168 (MQ=255) tACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaat < 1:159225‑M1/249‑86 (MQ=255) tctGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGAAGCGAACCAAACAGAGCTTCGGTGCCTATCATGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagctgtgcagttcctgccacttctctttcggcagtgccagttcttcgttgctgttgatgcgtccgtcacgttccagcatgctac > 1:416232‑M1/1‑161 (MQ=255) tAATCAAGTACAGTGGCAATACGCTTTGGCAATTCCGTTACTATCGGCCCTTGACCAAGCACCGAACCCAACAGCGCTTCGGTGCCTAACCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGCATCTAACGTTTTATTGGCGCAAGACActgactaaatgtgcagttcctgcaccttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcaccttccagaatgctacgcgcc > 2:192418‑M1/1‑156 (MQ=255) aGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcc > 1:130389‑M1/1‑150 (MQ=255) ccAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcccgttccagaatgctacgcgcaatatcctgc > 2:200546‑M1/1‑147 (MQ=255) ggCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttc > 1:314370‑M1/1‑142 (MQ=255) ggCAGTAAGCTTTGGCAACTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTTTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactatatgtgcagttcctgcaacttctctttcggcagtgccagttcgtcgttgctggagatgcgtacgtcacgttccagaagtctacgcgcaagatcctgcgcttc < 2:26736‑M1/251‑110 (MQ=255) cAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcct > 2:100710‑M1/1‑140 (MQ=255) gCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacg < 1:166237‑M1/251‑118 (MQ=255) ttGGCAATTCCGTTACTATCGGCCTTTGGCCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCGGCCGTTTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttcgctttcggcagtgccatttctgcgttgctgttgatgcggacgtcacgttccagaatgctacgcgcaatatcctgcgctgccggcaacgag < 2:418452‑M1/250‑120 (MQ=255) cAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttccggcaacgagtgcat < 1:123477‑M1/251‑125 (MQ=255) gTTACTATCGGCCGTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTAGCCTGCCGTCTCGCTTTCTGACGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACAgtgactagatgtgcagttcctgcaacttctctttcgggagttccagtgcttcgttgctgtggatgcggacgtcacgttccagaatgcgacgggcaatatcctgcgcttcctgcaacgagtgcatcgggtaa < 1:289605‑M1/251‑132 (MQ=255) cGGCCTGTGACCACGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACGCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgaccagatgtgcagtgcctgcaacttcactctcggcagggccagttcttcgttgctggtcatgcgtatgtcacgttccagaatgctacgcgcaatatccggcgcttcccgcaaccagtgcatctggtaagtgcca < 2:272995‑M1/249‑138 (MQ=255) ggCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacac < 1:53290‑M1/251‑141 (MQ=255) ttGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggt < 1:102593‑M1/250‑145 (MQ=255) gcccaaGCAGCGAACCAATCAGAGCGTCGGTGGCTAGCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActtactagatgtgcagttcctgcaacttcgctgtcggcggtgccagttcgtcgttgctgttgatgcgtacgtcacgttccagaatgcttcgcgcaatatcctgcgcggccggcaacgggtgcatcttggaagtgccacactggtag < 2:219689‑M1/248‑147 (MQ=255) aCCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCGGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAAGCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagggccagttcttcgttgctttggatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcgtcctgcaacgagtgcatctggtaagtgccacactggtagac < 1:221623‑M1/251‑149 (MQ=255) aaGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgtt > 1:323590‑M1/1‑100 (MQ=255) gcagcGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTATCGATTTCTGATGAACGTAAACTCAGAGCCGAATCTAACGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtcgacgttc > 1:75132‑M1/1‑98 (MQ=255) agcGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggcaagtgccacactggtagacgttcagt > 1:312277‑M1/1‑96 (MQ=255) aaCAGAGATTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGCATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaccttctctttcggcagagccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtcagtgccacactggtagacgttcagttccgggatc > 2:374576‑M1/1‑87 (MQ=255) cAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctg > 1:15530‑M1/1‑85 (MQ=255) agagATTCGGTGCCCTTCCTGCCGTCTCGCATTCTGATGCACGTAAACTCAGAGCCGTATCTAAAGTTTTATTGGCGAAAGACActgtctagatgtgcagttcctgcaacttctctttcggcagtgccagtgcttcgttgctgttgatgctgacgtcacgttccagaatgcgacgcgcaatattctgcgctgcctgcaacgagtgcatcttgtaagtgccacacttgtaagcgttcaggtccgtgatctga < 2:38989‑M1/251‑168 (MQ=255) gagCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgat < 1:310022‑M1/251‑169 (MQ=255) agCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgatt > 2:369081‑M1/1‑82 (MQ=255) tCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattct < 1:359342‑M1/249‑172 (MQ=255) aTCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcact < 1:18936‑M1/251‑183 (MQ=255) ccTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagttccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtggatgttcagtgccgggatctgattctgatcctgcacttt < 1:164745‑M1/251‑185 (MQ=255) ccTGCCGTCGCGCGGTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggtagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggagctgattctgatcctgcac < 2:93027‑M1/248‑182 (MQ=255) gCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttc < 1:83004‑M1/249‑186 (MQ=255) gCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacg > 2:285162‑M1/1‑64 (MQ=255) gCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacg < 1:285162‑M1/213‑150 (MQ=255) cGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctgggaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtc < 1:49123‑M1/250‑194 (MQ=255) gCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtctt < 2:321860‑M1/251‑196 (MQ=255) tGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGAAActgactagatgtgcagttcctgccacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtcttccattg > 1:26423‑M1/1‑50 (MQ=255) gATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtcttccattgc < 1:205697‑M1/251‑203 (MQ=255) aTGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtcttccattgcc < 1:339261‑M1/251‑204 (MQ=255) ggcACGTAAACTCAGAGCCGAATCGTAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccaggtcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgctgcctgcaacgagtgcatctgttaagtgccagacgggtagacgttcatgtccttgatctgagtcgaatcctgcactttcagcatgtcttccattgccg < 2:189041‑M1/250‑205 (MQ=255) gCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtcttccattgccgc > 1:100463‑M1/1‑46 (MQ=255) cACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGACAGACActaactagatgtgcagttcctgcaacttgtctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtcttccattgccgct > 1:431075‑M1/1‑45 (MQ=255) aaTCTAAAGTCTTATTGGCGAAAGACActgacttgatgtgcagttcctgaaacttctctttcggaagtgccagttcttcgttgctggtgatgcgtacgtcacgttccagaatgctacgcggaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtcgacgttcagttccgggatctgattctgatccttcactttcagcacgtcttccattgccgcgttccaggcatcagcaaca < 2:52234‑M1/251‑225 (MQ=255) cagTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagaagttcagttccgggatctgattctgatcctgcactttcagcacgtcttccattgccgctttacaggcatcagcaacacgctgc > 2:374535‑M1/2‑21 (MQ=255) gTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtcttccattgccgctttccaggcatcagca < 2:301312‑M1/240‑222 (MQ=255) gTTTTATTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtcttccattgccgctttccaggcatcagca > 1:301312‑M1/1‑19 (MQ=255) aTTGGCGAAAGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtcttccattgccgctttccaggcatcagcaacacgctgctcatctg > 2:112248‑M1/1‑14 (MQ=255) aaaGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcattatcctgcgcttcatgcaacgagtgcatctggtcagtgcaacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcccgtcttccattgccgctttcaaggcatcagcaacacgctgctcatctggcgtccc > 2:137923‑M1/1‑7 (MQ=255) aaaGACActgactagatgtgcagttcctgcaacttctcttacggcagtgccagttcttcgttgcggttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtcttccatggccgctttccaggcatcagcaacacgctggtcatctggcgtacc < 2:191389‑M1/251‑245 (MQ=255) aaGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtcttccattgccgctttccaggcatcagcaacacgctgctcatctggcgtacc > 1:368955‑M1/1‑6 (MQ=255) aGACActgactagatgtgcagttcctgcaacttctctttcggcagtgccagttcttcgttgatgttgatgagtacgtaacgttacagaatgctacgcgcaatatcctgcgattcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgatcctgcactttcagcacgtcttccattgccgctttccaggcatcagcaacacgctgctcatctggcgtacca > 1:383901‑M1/1‑5 (MQ=255) cactgactagatgtgcagttcctgcaacttctctttaggcagtgccagttcttcgttgctgttgatgcgtacgtcacgttccagaatgctacgcgcaatatcctgcgcttcctgcaacgagtgcatctggtaagtgccacactggtagacgttcagttccgggatctgattctgttcctgcactttcagcacgtcttccattgccgctttccaggcatcagcaccacgctgctcctctggcgtaccaatc > 2:321547‑M1/1‑2 (MQ=255) | CCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACATTGATCCTCAGGAACATCAGAAAGAACAGGTGAGGAATTCTCAAGAGGCCAAAACCAATACCTTCTTGTTAGTTGCCGAGCGTTGGTGGAATGTGAAGAAAACCAGCGTAACAGAGGACTATGCCGACGATATCTGGCGCTCGCTTGAGAGAGATATTTTCCCGGCAATCGGTGATATCAGTATCACTGAGATTAAGGCTCATACTCTGGTTAAAGCAGTTCAGCCGGTTCAGGCCAGAGGTGCATTA > NC_000913/2756172‑2756662 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |