| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,655,609 | Δ3,042 bp | [ynfA]–[ynfE] | [ynfA], ynfB, speG, ynfC, ynfD, [ynfE] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1655609 | 1658650 | 3042 | 39 [1] | [0] 38 | [ynfA]–[ynfE] | [ynfA],ynfB,speG,ynfC,ynfD,[ynfE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1655608 | 1 (0.020) | 38 (0.680) | 35/490 | 0.2 | 98.7% | coding (66/327 nt) | ynfA | putative transporter YnfA |
| ? | NC_000913 | 1658651 = | 0 (0.000) | coding (583/2427 nt) | ynfE | putative selenate reductase YnfE | |||||
GCAACAATGATCAACATGCCGCAAAGCGCAATCAACGCACCCGTCCAGTCATAAAGAGTC‑AGTTTCACGCCATCCACAACGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGGGCAGAAAGCATCCAATAATTTCACACAGCGCAGTAGCAAAAAATAGTAACGTTGTTTTAATCATCTTTGTCTCTTATTGACATCATGTATAGTTATAGGGCGACATAATATCATCAATATAAACACCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGTGTAGAATCACCTTTAATCATTCATACAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGC > NC_000913/1655366‑1655853 | gaaaaaattataaaCATGCCACAAAGCTCAAACAACGCCCTCCTCCAGACAGAAAGAGTC‑AGTTTCACGCCAGCCACAACGCGCAGACACCCCAGCGCCGGGCAGACATAAACGCCACAATAAGCGGTGAAAACCCGCCCACGCCCCGCTGGATGCTACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGAGACTGGCGTTTCTTTTCAACCACAACCAGTGCAgcac < 2:49984/239‑4 (MQ=255) aaatGATCAACATGCCGCAAAGCGCAATCAACGCCCCCGTCCAGTCATAAAGAGTC‑AGTTTCACGCCATCCACAACGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcg < 1:124708‑M1/250‑13 (MQ=255) aTGATCAACATGCCGCAAAGCGCAATCAACGCACCCGTCAAGTCATAAAGAGTC‑AGTTTCACGCCATCCACAACGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAACCACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGAGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgc > 1:271849‑M1/1‑237 (MQ=255) ccaACATGCCGCAAAGCGCAATCACCGCACCCGTCCAGTCATAAAGAGTC‑AGTTTCACGCCATCCACAACGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCACCCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatt < 1:320412‑M1/250‑19 (MQ=255) acaACAGGCCGCAAAGCGCAATCAACGCACCCGTCCAGTCATAAAGAGTC‑AGTTTCACGCCATCCACAACGCGCAGCCACAGCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCTCTCGCCGCTGGATGTAACGGTAACAACCAGACAATCAGCGCCAGTGAAAGCCCCGCCGTAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatt < 1:189191‑M1/250‑19 (MQ=255) aaCATGCCGCAAAGCGCAATCAACGCACCCGTCCAGTCATAAAGAGTC‑AGTTTCACGCCATCCACAACGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttc > 1:240558‑M1/1‑231 (MQ=255) gcAATCAACGCCCCCGTCCAGGCATAAAGAGGC‑AGTTCCACGCCATCCACACCGCGCAGCCACATCACCGCCGTGCATACATAAACGCCTCCATAAGCCTCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACATCGCCAGTTAAACCCCCGCCGGAAGCAGCAGCCAGATACTGGCGTTTCGTGTTAATGACAGCCAGtacagcactgcgcaaatttcctgtgccatgcccta < 1:258803‑M1/251‑36 (MQ=255) gCACCCGTCCAGTCATAAAGAGTC‑AGTTTCACGCCATCCACAACGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacgg < 1:218586‑M1/251‑45 (MQ=255) ccaCCCGCCCAGTCATAAAGAGTA‑ATTTTCACGCCAGCCCCAACTCCCAGCCACACCACCGCCGTGCAGACATAAACGCCACCAAAAGCCGCGTAAACACCCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacgg < 2:109258‑M1/250‑45 (MQ=255) ccccgCCCAGTCAAAAAGA‑TCAAGTTTCACCCCCCCCCCAACGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCCCCATACGCCGCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCGGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggca < 2:197286‑M1/250‑47 (MQ=255) ccGTCCAGTCATAAAGAGTC‑AGTTTCACGCCATCCACAACGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACCACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagt > 2:429070‑M1/1‑203 (MQ=255) cAGTCATAAAGAGTC‑AGTTTCACCCCATCCACAACGCGCAGCCAAATCAACGCCGTGCAGACATAAACGCCACAATAAGCCGCGTAAACACGCCCACTCGCCGCTGGCTGCAACGTTAACAACCAGACCAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatg > 2:34208‑M1/1‑198 (MQ=255) aaaagtc‑aGTTTCACGCCAGCCACACCGCGCAGCCACATCACCGCCGTTCAGACATAAACGCCACCATAAGCCGCGTAAACCCGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACGGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaaca < 1:274663‑M1/248‑62 (MQ=255) gTTTCACGCCATCCACAACGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacg > 1:146573‑M1/1‑182 (MQ=255) gCCATCCACACCGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACCCGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACACACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggccgtaatgatggcaacagcaccacggatattg > 2:378156‑M1/1‑175 (MQ=255) acaACGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaac > 1:225334‑M1/1‑168 (MQ=255) cgcgCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaag < 1:377893‑M1/251‑88 (MQ=255) cgcgCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagca > 1:116724‑M1/1‑164 (MQ=255) cccatcAACGCCGTGCAAAAATAAACCCCACCATATGCCGCGTAAACACGCCCACACGCCGATGGTTGCAACGTTAACAACGAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGCTACTGGCGTTTCGTATTAACCACAACCAGtacagctgtgcgcaaattttctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtcgt < 1:209945‑M1/249‑96 (MQ=255) acccccgggcaaacaaaaccgcccccaaaagccgcgtaaACACGCCCACCCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtcgtgatgtt < 2:340072‑M1/232‑102 (MQ=255) aaaacGCCACCATAAGCCGCGTATACACTCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAGCAGCGCCATTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatagtgaaaacagcaagctggtcgtgatgtttggtaacaacccggc < 1:186204‑M1/250‑117 (MQ=255) gCCGCGAAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTTAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtcgtgatgtttggtaacaacccggcagaaacccgcatgag < 1:218582‑M1/251‑132 (MQ=255) ccccgccgctggATGCAACGTTAACAACCAGACAAACAGCGCCAGTAAACTCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtcgtgatgtttggtaacaacccggcagaaacccgcatgagcggtggtggcatcactt < 2:116724‑M1/248‑149 (MQ=255) aCTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagctctgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtcgtgatgtttggtaacaacccggcagaaacccgcatgagcggtggtggcatcactt > 1:236226‑M1/1‑103 (MQ=255) cTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtcgtgatgtttggtaacaacccggcagaaacccgcatgagcggtggtggcatcactt > 2:338524‑M1/1‑102 (MQ=255) ccgcTGGATGCAACGTTAACAACCAGAAAAACAGCGCCAGTGAAAGCCCCGCCGGAAGCAACATCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcgagcgggtcgtgatgtttggtaacaacgcgggagaaacccgcattagcgttggtgccatcactgatctt < 2:37080‑M1/251‑154 (MQ=255) aCGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggctattgaaaacagcaagctggtcgtgatgtttggtaacaacccggcagaaacccgcatgagcggtggtggcatcacttatcttcttgaaaaagcg > 1:240049‑M1/1‑86 (MQ=255) cacacaaACAGAGCCAGTGAAAACCCCCCCGGAATCCACAGCCAGATACTGGCGTTTCGCTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgagggcaacagcaccacggatattgaaaacagcaagctggtcgtgatgtttggtaacaacccggcagaaacccgcatgagcagtggtggcatcacttaacgtcttgaaaaagcgcgcgagaaatc < 2:277112‑M1/248‑177 (MQ=255) cAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtcgtgatgtttggtaacaacccggcagaaacccgcatgagcggtggtggcatcacttatcttcttgaaaaagcgcgcgagaaatcgaac > 1:81967‑M1/1‑71 (MQ=255) aaaatCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGgacagcactgcgcaaagttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtagtgatgtttggtaacaacccggcagaaacccgcatgagcggtggtggcatcacttagcttcttgaaaaagcgcgcgagaaatcgaacgccaaaaggattgt < 2:317227‑M1/250‑195 (MQ=255) cgGAAGCAACTGCCAGATACAGCAGTTTCGTTTTAACCACAACCCGtacagcactgcgccaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtcgtgatgtttggtaacaacccggcagaaacccgcatgagcggtggcggcatcacttatcttcttgaaaaagcgcgcgagcaatcgaacgccaaaatgattgttatcgatccgc > 2:51220‑M1/1‑46 (MQ=255) aaGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACACCCAGtaaagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtcgtgatgtttggtaacaccccggcagaaacccgcatgagcggtggtggcatcacttatcttcttgaaaaagcgcgcgagaaatcgaacgccaaaatgattgttatcgatccgcgat > 1:398825‑M1/1‑43 (MQ=255) aaCAGCCAGATACTGGCGTTTCGTTTTAACCACCACCAGtacagcgctgcgcaaatttcctgtgccatgccatacacctacggcagtaatgatggaaacagcaccacggatattgaaaacagcaagctggtcgtgatgtttggaaatcacccggcagaaacccgcatgagcggtggtgacatccattatcttcttgaaaaagctcgagagaaatcgaacgccaaaatgcttgttatcgatccgtgatatac > 2:393059‑M1/1‑39 (MQ=255) gCCAGATACTGGCGTTTCGTTTTAACTCCAACCAGtacagcactgcgcaaatttcctgtgccatgacctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtcgtgatgtttggtaacaacccggcagaaacccgcatgagcggtggtggcatcacttatcttcttgaaaaagcgcgcgagaaatcgaacgccaaaatgattgttatcgatccgcgatataccgat > 1:339333‑M1/1‑35 (MQ=255) gCCAGATACTGGCGTTTCGTTTTAACCACAACCAGtacagcactgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggacgtgatgtttggtaacaacccggcagaaacccgcatgagcggtggtggcatcacttatcttcttgaaaaagcgcgcgagaaatcgaacgccaaaatgattgttatcgatccgcgatataccgat > 1:92041‑M1/1‑35 (MQ=255) gtttcgtttTAACCACAACCAGtacagcactgcgcaaatttcctgtgtcatgccctaaacctacggcagtaatgatggcaacagcaccacggatattgaaaacagaaagctggtcgtgatgtttggtaacaacccggcagaaacccgcatgagcggtggtggcatcacgtatctgattgaaaaagcgcgcgagaaatcgaaagccaaaatgattgttatcgatacgagatataccgacaaggctgccagtg > 2:83809‑M1/1‑22 (MQ=255) tttAACCACAACCAGtacagctctgcgcaaatttcctgtgccatgccctacacctacggcagtaatgatggcaacagcaccacggatattgaaaacagcaagctggtcgtgatgtttggtaacaacccggcagaaacccgcatgagcggtggtggcatcacttatcttcttgaaaaagcgcgcgagaaatcgaacgccaaaatgattgttatcgatccgcgatataccgatacggctgccggtcgtgaag < 2:236226‑M1/250‑236 (MQ=255) aCCACAACCAGtacagcactgcgcaaatttcctgtgccctgccctaccactccggccgtaatgatggcaacagcaccacggatattgaaaccagcaagctggccgtgatgtttggtaacaccccggcagaaacccgcatgagcggtggtggcatcccttatcttcttgaaaaagcgcgcgagaaatcgaacgccaaaatgattgttatcgctccgcgatctaccgatacggctgccggtcgtgaagacga > 2:274412‑M1/1‑11 (MQ=255) aaCCAGtacagcaatgcccaaatctcatgtgccatgcactacacctaaggcagtaatgatggaaaccgcaccaaggatattgaaaacagcaagctggtcgtgctgcttggtaacaaccaggcagacacccgcatgagcggtggtggcatcacttatcttcttgaaaaagcgcgcgagaaatcgaacgccaaaatgcttgttatcgatccgcgatatactgatacggctgccggacgtgaagacgactggct > 2:183896‑M1/1‑6 (MQ=255) | GCAACAATGATCAACATGCCGCAAAGCGCAATCAACGCACCCGTCCAGTCATAAAGAGTC‑AGTTTCACGCCATCCACAACGCGCAGCCACATCAACGCCGTGCAGACATAAACGCCACCATAAGCCGCGTAAACACGCCCACTCGCCGCTGGATGCAACGTTAACAACCAGACAAACAGCGCCAGTGAAATCCCCGCCGGAAGCAACAGCCAGATACTGGCGTTTCGTTTTAACCACAACCAGGGCAGAAAGCATCCAATAATTTCACACAGCGCAGTAGCAAAAAATAGTAACGTTGTTTTAATCATCTTTGTCTCTTATTGACATCATGTATAGTTATAGGGCGACATAATATCATCAATATAAACACCCTCCTGGTACGTTTTGCGTCCGCAGTGGATGGTGTAGAATCACCTTTAATCATTCATACAGGGAATGAATTATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGC > NC_000913/1655366‑1655853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |