| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,655,609 | Δ3,042 bp | [ynfA]–[ynfE] | [ynfA], ynfB, speG, ynfC, ynfD, [ynfE] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1655609 | 1658650 | 3042 | 39 [1] | [0] 38 | [ynfA]–[ynfE] | [ynfA],ynfB,speG,ynfC,ynfD,[ynfE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1655608 | 1 (0.020) | 38 (0.680) | 35/490 | 0.2 | 98.7% | coding (66/327 nt) | ynfA | putative transporter YnfA |
| ? | NC_000913 | 1658651 = | 0 (0.000) | coding (583/2427 nt) | ynfE | putative selenate reductase YnfE | |||||
CAATGAAACGCGTGGGCAAACGCGGCGAAGGCAAATTCGAACGGATTAGCTGGGATGAAGCCCTGGATACTATCGCCAGTAGCCTGAAGAAAACCGTCGAACAATATGGCAATGAGGCTGTATATATTCAGTACTCTTCGGGGATCGTTGGCGGCAATATGACCCGCTCTTCGCCATCAGCCTCGGCGGTCAAACGCCTGATGAACTGCTACGGCGGTTCACTCAACCAGTATGGCTCCTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACTTATCTTCTTGAAAAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCT > NC_000913/1658412‑1658895 | aaatgatcaacatgccgcaaagcgcaatcaacgcccccgtccagtcataaagagtcagtttcacgccatccacaacgcgcagccacatcaacgccgtgcagacataaacgccaccataagccgcgtaaacacgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTgcg < 1:124708‑M2/12‑1 (MQ=255) atgatcaacatgccgcaaagcgcaatcaacgcacccgtcaagtcataaagagtcagtttcacgccatccacaacgcgcagccacatcaacgccgtgcagacataaacgccaccataagccgcgtaaccacgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagagaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTgcgc > 1:271849‑M2/238‑250 (MQ=255) ccaacatgccgcaaagcgcaatcaccgcacccgtccagtcataaagagtcagtttcacgccatccacaacgcgcagccacatcaacgccgtgcagacataaacgccaccataagccgcgtaaacacgcccacccgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAAtt < 1:320412‑M2/18‑1 (MQ=255) acaacaggccgcaaagcgcaatcaacgcacccgtccagtcataaagagtcagtttcacgccatccacaacgcgcagccacagcaacgccgtgcagacataaacgccaccataagccgcgtaaacacgccctctcgccgctggatgtaacggtaacaaccagacaatcagcgccagtgaaagccccgccgtaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAAtt < 1:189191‑M2/18‑1 (MQ=255) aacatgccgcaaagcgcaatcaacgcacccgtccagtcataaagagtcagtttcacgccatccacaacgcgcagccacatcaacgccgtgcagacataaacgccaccataagccgcgtaaacacgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTc > 1:240558‑M2/232‑251 (MQ=255) gcaatcaacgcccccgtccaggcataaagaggcagttccacgccatccacaccgcgcagccacatcaccgccgtgcatacataaacgcctccataagcctcgtaaacacgcccactcgccgctggatgcaacgttaacaaccagacaaacatcgccagttaaacccccgccggaagcagcagccagatactggcgtttcgtgttaatgacagccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTa < 1:258803‑M2/35‑1 (MQ=255) gcacccgtccagtcataaagagtcagtttcacgccatccacaacgcgcagccacatcaacgccgtgcagacataaacgccaccataagccgcgtaaacacgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACgg < 1:218586‑M2/44‑1 (MQ=255) ccacccgcccagtcataaagagtaattttcacgccagccccaactcccagccacaccaccgccgtgcagacataaacgccaccaaaagccgcgtaaacacccccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACgg < 2:109258‑M2/44‑1 (MQ=255) ccccgcccagtcaaaaagatcaagtttcaccccccccccaacgcgcagccacatcaacgccgtgcagacataaacgcccccatacgccgcgtaaacacgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccggtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCa < 2:197286‑M2/46‑1 (MQ=255) ccgtccagtcataaagagtcagtttcacgccatccacaacgcgcagccacatcaacgccgtgcagacataaacgccaccataagccgcgtaaacacgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccaccaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGt > 2:429070‑M2/204‑251 (MQ=255) cagtcataaagagtcagtttcaccccatccacaacgcgcagccaaatcaacgccgtgcagacataaacgccacaataagccgcgtaaacacgcccactcgccgctggctgcaacgttaacaaccagaccaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAatg > 2:34208‑M2/199‑250 (MQ=255) aaaagtcagtttcacgccagccacaccgcgcagccacatcaccgccgttcagacataaacgccaccataagccgcgtaaacccgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatacgggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACa < 1:274663‑M2/61‑1 (MQ=255) gtttcacgccatccacaacgcgcagccacatcaacgccgtgcagacataaacgccaccataagccgcgtaaacacgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACg > 1:146573‑M2/183‑251 (MQ=255) gccatccacaccgcgcagccacatcaacgccgtgcagacataaacgccaccataagccgcgtaaacccgcccactcgccgctggatgcaacgttaacaaccagacacacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCCGTAATGATGGCAACAGCACCACGGATATTg > 2:378156‑M2/176‑251 (MQ=255) acaacgcgcagccacatcaacgccgtgcagacataaacgccaccataagccgcgtaaacacgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAAc > 1:225334‑M2/169‑249 (MQ=255) cgcgcagccacatcaacgccgtgcagacataaacgccaccataagccgcgtaaacacgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCa > 1:116724‑M2/165‑249 (MQ=255) cgcgcagccacatcaacgccgtgcagacataaacgccaccataagccgcgtaaacacgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAg < 1:377893‑M2/87‑1 (MQ=255) cccatcaacgccgtgcaaaaataaaccccaccatatgccgcgtaaacacgcccacacgccgatggttgcaacgttaacaacgagacaaacagcgccagtgaaatccccgccggaagcaacagccagctactggcgtttcgtattaaccacaaccagTACAGCTGTGCGCAAATTTTCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGt < 1:209945‑M2/95‑1 (MQ=255) acccccgggcaaacaaaaccgcccccaaaagccgcgtaaacacgcccacccgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGtt < 2:340072‑M2/101‑1 (MQ=255) aaaacgccaccataagccgcgtatacactcccactcgccgctggatgcaacgttaacaaccagacaagcagcgccattgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATAGTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGc < 1:186204‑M2/116‑1 (MQ=255) gccgcgaaaacacgcccactcgccgctggatgcaacgttaacaaccagacaaacagcgccagttaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAg < 1:218582‑M2/131‑1 (MQ=255) ccccgccgctggatgcaacgttaacaaccagacaaacagcgccagtaaactccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACtt < 2:116724‑M2/148‑1 (MQ=255) actcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCTCTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACtt > 1:236226‑M2/104‑251 (MQ=255) ctcgccgctggatgcaacgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACtt > 2:338524‑M2/103‑250 (MQ=255) ccgctggatgcaacgttaacaaccagaaaaacagcgccagtgaaagccccgccggaagcaacatccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCGAGCGGGTCGTGATGTTTGGTAACAACGCGGGAGAAACCCGCATTAGCGTTGGTGCCATCACTGAtctt < 2:37080‑M2/153‑1 (MQ=255) acgttaacaaccagacaaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGCTATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACTTATCTTCTTGAAAAAgcg > 1:240049‑M2/87‑251 (MQ=255) cacacaaacagagccagtgaaaacccccccggaatccacagccagatactggcgtttcgctttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGAGGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCAGTGGTGGCATCACTTAACGTCTTGAAAAAGCGCGCGAGAAATc < 2:277112‑M2/176‑1 (MQ=255) caaacagcgccagtgaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACTTATCTTCTTGAAAAAGCGCGCGAGAAATCGAAc > 1:81967‑M2/72‑251 (MQ=255) aaaatccccgccggaagcaacagccagatactggcgtttcgttttaaccacaaccagGACAGCACTGCGCAAAGTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTAGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACTTAGCTTCTTGAAAAAGCGCGCGAGAAATCGAACGCCAAAAGGATTGt < 2:317227‑M2/194‑1 (MQ=255) cggaagcaactgccagatacagcagtttcgttttaaccacaacccgTACAGCACTGCGCCAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGCGGCATCACTTATCTTCTTGAAAAAGCGCGCGAGCAATCGAACGCCAAAATGATTGTTATCGATCcgc > 2:51220‑M2/47‑251 (MQ=255) aagcaacagccagatactggcgtttcgttttaaccacacccagTAAAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACACCCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACTTATCTTCTTGAAAAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGat > 1:398825‑M2/44‑251 (MQ=255) aacagccagatactggcgtttcgttttaaccaccaccagTACAGCGCTGCGCAAATTTCCTGTGCCATGCCATACACCTACGGCAGTAATGATGGAAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGAAATCACCCGGCAGAAACCCGCATGAGCGGTGGTGACATCCATTATCTTCTTGAAAAAGCTCGAGAGAAATCGAACGCCAAAATGCTTGTTATCGATCCGTGATATAc > 2:393059‑M2/40‑251 (MQ=255) gccagatactggcgtttcgttttaactccaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGACCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACTTATCTTCTTGAAAAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGAt > 1:339333‑M2/36‑251 (MQ=255) gccagatactggcgtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGACGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACTTATCTTCTTGAAAAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGAt > 1:92041‑M2/36‑251 (MQ=255) gtttcgttttaaccacaaccagTACAGCACTGCGCAAATTTCCTGTGTCATGCCCTAAACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGAAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACGTATCTGATTGAAAAAGCGCGCGAGAAATCGAAAGCCAAAATGATTGTTATCGATACGAGATATACCGACAAGgctgccagtg > 2:83809‑M2/23‑247 (MQ=255) tttaaccacaaccagTACAGCTCTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACTTATCTTCTTGAAAAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAg < 2:236226‑M2/235‑1 (MQ=255) accacaaccagTACAGCACTGCGCAAATTTCCTGTGCCCTGCCCTACCACTCCGGCCGTAATGATGGCAACAGCACCACGGATATTGAAACCAGCAAGCTGGCCGTGATGTTTGGTAACACCCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCCCTTATCTTCTTGAAAAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGCTCCGCGATCTACCGATACGGCTGCCGGTCGTGAAGACGa > 2:274412‑M2/12‑250 (MQ=255) aaccagTACAGCAATGCCCAAATCTCATGTGCCATGCACTACACCTAAGGCAGTAATGATGGAAACCGCACCAAGGATATTGAAAACAGCAAGCTGGTCGTGCTGCTTGGTAACAACCAGGCAGACACCCGCATGAGCGGTGGTGGCATCACTTATCTTCTTGAAAAAGCGCGCGAGAAATCGAACGCCAAAATGCTTGTTATCGATCCGCGATATACTGATACGGCTGCCGGACGTGAAGACGACTGGCt > 2:183896‑M2/7‑251 (MQ=255) | CAATGAAACGCGTGGGCAAACGCGGCGAAGGCAAATTCGAACGGATTAGCTGGGATGAAGCCCTGGATACTATCGCCAGTAGCCTGAAGAAAACCGTCGAACAATATGGCAATGAGGCTGTATATATTCAGTACTCTTCGGGGATCGTTGGCGGCAATATGACCCGCTCTTCGCCATCAGCCTCGGCGGTCAAACGCCTGATGAACTGCTACGGCGGTTCACTCAACCAGTATGGCTCCTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACTTATCTTCTTGAAAAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCT > NC_000913/1658412‑1658895 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |