Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,348,550 Δ41,411 bp [yfaE][yfbP] 40 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2348550 2389960 41411 62 [0] [0] 62 [yfaE]–[yfbP] [yfaE],inaA,glpQ,glpT,glpA,glpB,glpC,rpnE,yfaU,yfaV,rhmD,yfaX,yfaY,yfaZ,nudI,ais,arnB,arnC,arnA,arnD,arnT,arnE,arnF,pmrD,menE,menC,menB,menH,menD,menF,elaB,elaA,rbn,elaD,yfbK,yfbL,yfbM,yfbN,yfbO,[yfbP]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 23485490 (0.000)62 (0.870) 60/490 0.1 100% coding (36/255 nt) yfaE ferredoxin‑like diferric‑tyrosyl radical cofactor maintenance protein YfaE
?NC_000913 2389961 = 0 (0.000)coding (846/849 nt) yfbP uncharacterized protein YfbP

AGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGATGTGTGTTGATACTTATTTTGCGCAGAGAAAACCGCTTCAGGCATTAACCCTGTTACATAATTATGCCTGGATAATGTCCAGTGAAACGACTGCATTTCAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGATGGTGCATCGCGACCCGGTTGTTCCGGGGCGTGAA  >  NC_000913/2389712‑2390205
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    
ccagtacgttgaatacatcaccaatatccgtatgcaggcagtcggtttggatctgccgttccagacgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaatt                                                                                                                                                                                                                                                     <  2:130495‑M2/2‑1 (MQ=255)
   gtacgttgaatacatcaccaatatccgtatgcaggcagtcggtttggatctgccgttccagacgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgtttccctgcgcatcactggcacacaaTTAAc                                                                                                                                                                                                                                                  <  1:463248‑M2/5‑1 (MQ=255)
     acgttgaatacatcaccactatccgtctgcaggccgacggtttggatctgccgttccagacgcgctcccacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGc                                                                                                                                                                                                                                                >  2:389420‑M2/245‑251 (MQ=255)
              acatcacccatatccgtacgcaggcagtaggtttggatctgccgttccagacgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCtgcggct                                                                                                                                                                                                                                       >  1:163560‑M2/236‑248 (MQ=255)
                    ccaatatccgtatgcaggcagtcggtttggctctgccgttccagacgcgctccaacccgatcccgtggatccacacttggctggtgtctgataccgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTCTctac                                                                                                                                                                                                                                 >  2:104861‑M2/230‑251 (MQ=255)
                     caatatccgtatgcaggcagtcggtttggatctgccgttccagacgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATctact                                                                                                                                                                                                                                <  2:585482‑M2/23‑1 (MQ=255)
                            cgtatgcaggcagtcggtttggatctgccgttccagacgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctgcgcaggaagtggaagtcagttcttagctggttgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggctcgcgttgctcggcgctgcactggcacacaaTGAACGCTCTGCGGCTATCTACTATCCctt                                                                                                                                                                                                                         <  1:596173‑M2/30‑1 (MQ=255)
                             gtatgcaggcagtcggtttggatctgccgttccagacgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCcttc                                                                                                                                                                                                                        >  1:550688‑M2/221‑251 (MQ=255)
                               atgcaggcagtcggtttggatctgccgttccagacgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCcttctt                                                                                                                                                                                                                      <  2:20466‑M2/33‑1 (MQ=255)
                               atgcaggcagtcggtttggatctgccgttccagacgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACGATCCcttct                                                                                                                                                                                                                       <  1:197543‑M2/32‑1 (MQ=255)
                                 gcggtcagtcggtttggatctgccgttccagacgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCttt                                                                                                                                                                                                                     <  1:26720‑M2/34‑1 (MQ=255)
                                 gcaggcagtcggtttggatctgccgttccagacgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagttgaagtcagttcttatctgggcgggcagatggactcggaagtggacaccgacgatttgagtaacttccatctctgatggcccgctttaccctttgcatcactggcgcacaaTTATCGCTCTGCGTCTATCTACTATCCCTTCttt                                                                                                                                                                                                                     <  1:58397‑M2/34‑1 (MQ=255)
                                      cagtcggtttggatctgccgttccagacgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaGTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGa                                                                                                                                                                                                               <  1:377552‑M2/40‑1 (MQ=255)
                                            gtgtggatctgccggtcctgccgcggtccaacccgatcccgtggatctacactttgctcgtgtcggataacgtgcaggttgctccgcatgaagtggaagtcagttcttatctggacgggcagagtgactcggaagtggacaccgacgatttgagtagcttccatctctgatggcccgcgttaccctgcgcatcactggcacacaaGTAACGCTCTGCGGCTATGTACTATCCCTTCTTTATCAGAAAAAcc                                                                                                                                                                                                         <  2:504091‑M2/46‑1 (MQ=255)
                                               tggatctgccgttccagacgcgctaccacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacaccaTTAACGCTCTGCGGCTATCTAATATCCCTTCTTTTTCAGAAAaaccgac                                                                                                                                                                                                      >  1:196106‑M2/203‑249 (MQ=255)
                                                       ccgttccagacgcgctccaacccgatcccgttgatcaacgcttggctggtgtctgataacgtgcaggttgctccgcaggaggtggaattcagttcttatctggtcgggcagattgactcggaagtggcccccgacgatttgagtaactccctgctctgacggcccgctttcccctgcgcatccctggcgcacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGt                                                                                                                                                                                              <  1:375349‑M2/57‑1 (MQ=255)
                                                              aggcgcgctccaacccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCggcggc                                                                                                                                                                                       <  2:142013‑M2/64‑1 (MQ=255)
                                                                 cgcgctccaacccgatcccgtggctcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCttt                                                                                                                                                                                    >  1:529207‑M2/185‑251 (MQ=255)
                                                                          acccgatcccgtggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTAc                                                                                                                                                                           >  1:483066‑M2/176‑251 (MQ=255)
                                                                                     tggatcaacacttggctggtgtctgctaacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGCCTTACAAAGTAAc                                                                                                                                                                   >  2:273299‑M2/165‑248 (MQ=255)
                                                                                      ggatcaacacttggctggtgtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAAc                                                                                                                                                                   >  1:323765‑M2/164‑247 (MQ=255)
                                                                                                        ggtctgataacgtgcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaaggggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTCCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGcc                                                                                                                                             <  2:25576‑M2/106‑1 (MQ=255)
                                                                                                             gataacgtgcaggttgctccgtaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttcccctgcgcatcactggcacacaaTTAACGCTCGGCGGCTATCTTCTATCCCTCCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACg                                                                                                                                        <  1:569916‑M2/111‑1 (MQ=255)
                                                                                                               aaacttgcaggttgctacgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggccctcgttaccctgcggatcacaggcacacaaTTAACGCTCTGCGGCTAGCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGca                                                                                                                                      <  1:568347‑M2/113‑1 (MQ=255)
                                                                                                               aaacgggcaggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagatggacgcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGca                                                                                                                                      <  1:104861‑M2/113‑1 (MQ=255)
                                                                                                                       gggttgctccgcaggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTa                                                                                                                              <  2:68965‑M2/121‑1 (MQ=255)
                                                                                                                                  caggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTtg                                                                                                                   >  1:152377‑M2/120‑251 (MQ=255)
                                                                                                                                   aggaagtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTACTCAGCGGTtgt                                                                                                                  >  1:13546‑M2/119‑251 (MQ=255)
                                                                                                                                     gaaggggaagtcagttcttatctggtcgggcggattgactcggaggtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTAGCTACTATCCCTTCTTTTCCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTgg                                                                                                                <  2:411864‑M2/135‑1 (MQ=255)
                                                                                                                                       agtggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtcacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGcc                                                                                                              >  1:570753‑M2/115‑251 (MQ=255)
                                                                                                                                          ggaagtcagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACACTGCTAATCAGCGGTTGTGGCCAt                                                                                                            >  2:206443‑M2/112‑250 (MQ=255)
                                                                                                                                             agtcagttcttatctggtcgggcagattgactcggacgtggacaccgacgatttgagtaacttccagctctgctggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGATAATCAGCGGTTGTGGCCATacac                                                                                                        >  1:378692‑M2/109‑251 (MQ=255)
                                                                                                                                                cagttcttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACacca                                                                                                      >  1:534413‑M2/106‑249 (MQ=255)
                                                                                                                                                      ttatctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCaccc                                                                                               >  2:161247‑M2/100‑250 (MQ=255)
                                                                                                                                                        atctggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAg                                                                                              <  1:399629‑M2/153‑1 (MQ=255)
                                                                                                                                                           tggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTCTCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTAcc                                                                                          >  2:301756‑M2/95‑251 (MQ=255)
                                                                                                                                                            ggtcgggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTAcc                                                                                          >  1:545968‑M2/94‑250 (MQ=255)
                                                                                                                                                            ggtcgggcaaattgactcggaagtggacaccgccgatttgagtaacttccagctctgatggcccgcgttcccccgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAAAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTAcc                                                                                          <  2:163560‑M2/157‑1 (MQ=255)
                                                                                                                                                                gggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAAc                                                                                       >  2:175308‑M2/90‑249 (MQ=255)
                                                                                                                                                                 ggcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGt                                                                                    <  1:161247‑M2/163‑1 (MQ=255)
                                                                                                                                                                  gcagattgactcggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTg                                                                                   <  1:119577‑M2/164‑1 (MQ=255)
                                                                                                                                                                              ggaagtggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAATCCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGCTCAGca                                                                       <  1:292265‑M2/176‑1 (MQ=255)
                                                                                                                                                                                   tggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCa                                                                                               >  2:319284‑M2/71‑222 (MQ=255)
                                                                                                                                                                                   gggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCa                                                                                               <  1:319284‑M2/152‑1 (MQ=255)
                                                                                                                                                                                    ggacaccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACg                                                                  >  2:344096‑M2/70‑250 (MQ=255)
                                                                                                                                                                                         ccgacgatttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATAccg                                                            >  1:331468‑M2/65‑251 (MQ=255)
                                                                                                                                                                                                 ttgagtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCt                                                    >  1:208867‑M2/57‑251 (MQ=255)
                                                                                                                                                                                                    agtaacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTa                                                 <  1:335450‑M2/198‑1 (MQ=255)
                                                                                                                                                                                                       aacttccagctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGAGTACATCAGCGGCAGTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACt                                               <  1:273299‑M2/200‑1 (MQ=255)
                                                                                                                                                                                                           cccagccctgatgccccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAg                                          <  2:13546‑M2/205‑1 (MQ=255)
                                                                                                                                                                                                             cagctctgatggcccgcgttaccctgagcatcactggcccacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGtt                                        >  2:188124‑M2/45‑251 (MQ=255)
                                                                                                                                                                                                               gctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAAc                                                                   >  2:238019‑M2/43‑222 (MQ=255)
                                                                                                                                                                                                               gctctgatggcccgcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAAc                                                                   <  1:238019‑M2/180‑1 (MQ=255)
                                                                                                                                                                                                                            gcgttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACACAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTCCTGCCAGTTTGATGGTGCATcgcg                         >  2:85990‑M2/30‑251 (MQ=255)
                                                                                                                                                                                                                              gttaccctgcgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGATGGTGCATCGCGAc                       >  1:78373‑M2/28‑251 (MQ=255)
                                                                                                                                                                                                                                       cgcatcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGATGGTGCATCGCGACCCGgttgtt              >  1:585552‑M2/19‑251 (MQ=255)
                                                                                                                                                                                                                                         catcactggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGATGGTGCATCGCGACCCGGTTGTTcc            <  1:344096‑M2/235‑1 (MQ=255)
                                                                                                                                                                                                                                             actggcacacaaTTCACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGATGGTGCATCGCGACCCGGTTGTTCCgggg        >  1:192069‑M2/13‑251 (MQ=255)
                                                                                                                                                                                                                                                ggcacccaaTTAACGCTCTGCGGCTAGCTACTTTCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGATGGTGCATCGCGACCCGGTTGTTCCGGGGCGt     <  2:139228‑M2/242‑1 (MQ=255)
                                                                                                                                                                                                                                                ggcacacaaTTACCGCTCTGCGGCTATCTACTACCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGATGGTGCAGCGCGACCCGGTTGTTCCGGGGCg      <  2:99038‑M2/241‑1 (MQ=255)
                                                                                                                                                                                                                                                ggcacacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTACCAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAACGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGATGGAGCATAGCGACCCGGTTGTTCCGGGGCGt     >  1:101535‑M2/10‑251 (MQ=255)
                                                                                                                                                                                                                                                   acacaaTTAACGCTCTGCGGCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGATGGTGCATCGCGACCCGGTTGTTCCGGGGCGTGaa  <  1:331451‑M2/245‑1 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                    
AGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGATGTGTGTTGATACTTATTTTGCGCAGAGAAAACCGCTTCAGGCATTAACCCTGTTACATAATTATGCCTGGATAATGTCCAGTGAAACGACTGCATTTCAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAACGCTCTGCGTCTATCTACTATCCCTTCTTTTTCAGAAAAACCGCCGAGCATGTCGGCGGCTTTCTGACTTACAAAGTAACAGATTACATCAGCGGCATTGCCAAACGCACAATGCTAATCAGCGGTTGTGGCCATACACCCAGCACCAGTACCAACAGTGCAGAGATCAGCACAACGATACCGCCCGCGCTGTACTGCCAGTTTGATGGTGCATCGCGACCCGGTTGTTCCGGGGCGTGAA  >  NC_000913/2389712‑2390205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: