Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,348,550 Δ41,411 bp [yfaE][yfbP] 40 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2348550 2389960 41411 62 [0] [0] 62 [yfaE]–[yfbP] [yfaE],inaA,glpQ,glpT,glpA,glpB,glpC,rpnE,yfaU,yfaV,rhmD,yfaX,yfaY,yfaZ,nudI,ais,arnB,arnC,arnA,arnD,arnT,arnE,arnF,pmrD,menE,menC,menB,menH,menD,menF,elaB,elaA,rbn,elaD,yfbK,yfbL,yfbM,yfbN,yfbO,[yfbP]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 23485490 (0.000)62 (0.870) 60/490 0.1 100% coding (36/255 nt) yfaE ferredoxin‑like diferric‑tyrosyl radical cofactor maintenance protein YfaE
?NC_000913 2389961 = 0 (0.000)coding (846/849 nt) yfbP uncharacterized protein YfbP

CCAGTACGTTGAATACATCACCAATATCCGTATGCAGGCAGTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAACTGCTGTGCCAGGATGAACACCCTTCCCTTCTGGCGGCGCTGGAATCCCACAATGTGGCGGTTGAGTACCAGTGTCGCGAAGGTTACTGCGGCTCCTGTCGCACACGCCTGGTTGCAGGTCAAGTTGACTGGATTGCCGAACCGTTAGCCTTTATTCAGCCGGGGGAAATTTTGCCCTGTTGTTGCCGGGCAAAAGGCGATATTGAAATCGAGATGTGAATTGGTTGTAGTGCCAGATACAACGC  >  NC_000913/2348301‑2348794
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                     
ccAGTACGTTGAATACATCACCAATATCCGTATGCAGGCAGTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAtt                                                                                                                                                                                                                                                     <  2:130495‑M1/251‑3 (MQ=255)
   gTACGTTGAATACATCACCAATATCCGTATGCAGGCAGTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTTCCCTGCGCATCACTGGCACACAAttaac                                                                                                                                                                                                                                                  <  1:463248‑M1/251‑6 (MQ=255)
     aCGTTGAATACATCACCACTATCCGTCTGCAGGCCGACGGTTTGGATCTGCCGTTCCAGACGCGCTCCCACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgc                                                                                                                                                                                                                                                >  2:389420‑M1/1‑244 (MQ=255)
              aCATCACCCATATCCGTACGCAGGCAGTAGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggct                                                                                                                                                                                                                                       >  1:163560‑M1/1‑235 (MQ=255)
                    ccAATATCCGTATGCAGGCAGTCGGTTTGGCTCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCCACACTTGGCTGGTGTCTGATACCGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctctctac                                                                                                                                                                                                                                 >  2:104861‑M1/1‑229 (MQ=255)
                     cAATATCCGTATGCAGGCAGTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctact                                                                                                                                                                                                                                <  2:585482‑M1/251‑24 (MQ=255)
                            cGTATGCAGGCAGTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTGCGCAGGAAGTGGAAGTCAGTTCTTAGCTGGTTGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCTCGCGTTGCTCGGCGCTGCACTGGCACACAAtgaacgctctgcggctatctactatccctt                                                                                                                                                                                                                         <  1:596173‑M1/251‑31 (MQ=255)
                             gTATGCAGGCAGTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttc                                                                                                                                                                                                                        >  1:550688‑M1/1‑220 (MQ=255)
                               aTGCAGGCAGTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctt                                                                                                                                                                                                                      <  2:20466‑M1/251‑34 (MQ=255)
                               aTGCAGGCAGTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctacgatcccttct                                                                                                                                                                                                                       <  1:197543‑M1/250‑33 (MQ=255)
                                 gcggtcagtcggtTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttcttt                                                                                                                                                                                                                     <  1:26720‑M1/245‑35 (MQ=255)
                                 gcaggcagTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTTGAAGTCAGTTCTTATCTGGGCGGGCAGATGGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCATCTCTGATGGCCCGCTTTACCCTTTGCATCACTGGCGCACAAttatcgctctgcgtctatctactatcccttcttt                                                                                                                                                                                                                     <  1:58397‑M1/250‑35 (MQ=255)
                                      cagTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAgtaacgctctgcggctatctactatcccttctttttcaga                                                                                                                                                                                                               <  1:377552‑M1/251‑41 (MQ=255)
                                            gtgtggaTCTGCCGGTCCTGCCGCGGTCCAACCCGATCCCGTGGATCTACACTTTGCTCGTGTCGGATAACGTGCAGGTTGCTCCGCATGAAGTGGAAGTCAGTTCTTATCTGGACGGGCAGAGTGACTCGGAAGTGGACACCGACGATTTGAGTAGCTTCCATCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAgtaacgctctgcggctatgtactatcccttctttatcagaaaaacc                                                                                                                                                                                                         <  2:504091‑M1/248‑47 (MQ=255)
                                               tGGATCTGCCGTTCCAGACGCGCTACCACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACCAttaacgctctgcggctatctaatatcccttctttttcagaaaaaccgac                                                                                                                                                                                                      >  1:196106‑M1/1‑202 (MQ=255)
                                                       ccGTTCCAGACGCGCTCCAACCCGATCCCGTTGATCAACGCTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAGGTGGAATTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGCCCCCGACGATTTGAGTAACTCCCTGCTCTGACGGCCCGCTTTCCCCTGCGCATCCCTGGCGCACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgt                                                                                                                                                                                              <  1:375349‑M1/251‑58 (MQ=255)
                                                              aggcgcgctcCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggc                                                                                                                                                                                       <  2:142013‑M1/248‑65 (MQ=255)
                                                                 cgcgCTCCAACCCGATCCCGTGGCTCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggcttt                                                                                                                                                                                    >  1:529207‑M1/1‑184 (MQ=255)
                                                                          aCCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttac                                                                                                                                                                           >  1:483066‑M1/1‑175 (MQ=255)
                                                                                     tGGATCAACACTTGGCTGGTGTCTGCTAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgccttacaaagtaac                                                                                                                                                                   >  2:273299‑M1/1‑164 (MQ=255)
                                                                                      ggATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaac                                                                                                                                                                   >  1:323765‑M1/1‑163 (MQ=255)
                                                                                                        ggtcTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGGGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttcttttccagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgcc                                                                                                                                             <  2:25576‑M1/250‑107 (MQ=255)
                                                                                                             gATAACGTGCAGGTTGCTCCGTAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTCCCCTGCGCATCACTGGCACACAAttaacgctcggcggctatcttctatccctcctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacg                                                                                                                                        <  1:569916‑M1/251‑112 (MQ=255)
                                                                                                               aaacttgcaggTTGCTACGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCTCGTTACCCTGCGGATCACAGGCACACAAttaacgctctgcggctagctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgca                                                                                                                                      <  1:568347‑M1/246‑114 (MQ=255)
                                                                                                               aaacGGGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATGGACGCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgca                                                                                                                                      <  1:104861‑M1/250‑114 (MQ=255)
                                                                                                                       gggtTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgcta                                                                                                                              <  2:68965‑M1/250‑122 (MQ=255)
                                                                                                                                  cAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttg                                                                                                                   >  1:152377‑M1/1‑119 (MQ=255)
                                                                                                                                   aGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctactcagcggttgt                                                                                                                  >  1:13546‑M1/1‑118 (MQ=255)
                                                                                                                                     gaaggggaagtCAGTTCTTATCTGGTCGGGCGGATTGACTCGGAGGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctagctactatcccttcttttccagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtgg                                                                                                                <  2:411864‑M1/251‑136 (MQ=255)
                                                                                                                                       agtggaagtCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTCACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggcc                                                                                                              >  1:570753‑M1/1‑114 (MQ=255)
                                                                                                                                          ggaagtCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacactgctaatcagcggttgtggccat                                                                                                            >  2:206443‑M1/1‑111 (MQ=255)
                                                                                                                                             agtCAGTTCTTATCTGGTCGGGCAGATTGACTCGGACGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGCTGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgataatcagcggttgtggccatacac                                                                                                        >  1:378692‑M1/1‑108 (MQ=255)
                                                                                                                                                cAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacca                                                                                                      >  1:534413‑M1/1‑105 (MQ=255)
                                                                                                                                                      ttATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccc                                                                                               >  2:161247‑M1/1‑99 (MQ=255)
                                                                                                                                                        aTCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccag                                                                                              <  1:399629‑M1/250‑154 (MQ=255)
                                                                                                                                                           tGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactctcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtacc                                                                                          >  2:301756‑M1/1‑94 (MQ=255)
                                                                                                                                                            ggTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtacc                                                                                          >  1:545968‑M1/1‑93 (MQ=255)
                                                                                                                                                            ggTCGGGCAAATTGACTCGGAAGTGGACACCGCCGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTCCCCCGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcaaaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtacc                                                                                          <  2:163560‑M1/250‑158 (MQ=255)
                                                                                                                                                                gggCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaac                                                                                       >  2:175308‑M1/1‑89 (MQ=255)
                                                                                                                                                                 ggCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagt                                                                                    <  1:161247‑M1/251‑164 (MQ=255)
                                                                                                                                                                  gCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtg                                                                                   <  1:119577‑M1/251‑165 (MQ=255)
                                                                                                                                                                              ggAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaatccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagctcagca                                                                       <  1:292265‑M1/251‑177 (MQ=255)
                                                                                                                                                                                   tGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcacca                                                                                               >  2:319284‑M1/1‑70 (MQ=255)
                                                                                                                                                                                   gggaCACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcacca                                                                                               <  1:319284‑M1/221‑153 (MQ=255)
                                                                                                                                                                                    ggACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacg                                                                  >  2:344096‑M1/1‑69 (MQ=255)
                                                                                                                                                                                         ccGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccg                                                            >  1:331468‑M1/1‑64 (MQ=255)
                                                                                                                                                                                                 ttGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgct                                                    >  1:208867‑M1/1‑56 (MQ=255)
                                                                                                                                                                                                    aGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgta                                                 <  1:335450‑M1/251‑199 (MQ=255)
                                                                                                                                                                                                       aaCTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagagtacatcagcggcagtgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtact                                               <  1:273299‑M1/250‑201 (MQ=255)
                                                                                                                                                                                                           cccaGCCCTGATGCCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtactgccag                                          <  2:13546‑M1/250‑206 (MQ=255)
                                                                                                                                                                                                             cAGCTCTGATGGCCCGCGTTACCCTGAGCATCACTGGCCCACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtactgccagtt                                        >  2:188124‑M1/1‑44 (MQ=255)
                                                                                                                                                                                                               gCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaac                                                                   >  2:238019‑M1/1‑42 (MQ=255)
                                                                                                                                                                                                               gCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaac                                                                   <  1:238019‑M1/222‑181 (MQ=255)
                                                                                                                                                                                                                            gcgTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacacagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtcctgccagtttgatggtgcatcgcg                         >  2:85990‑M1/1‑29 (MQ=255)
                                                                                                                                                                                                                              gTTACCCTGCGCATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtactgccagtttgatggtgcatcgcgac                       >  1:78373‑M1/1‑27 (MQ=255)
                                                                                                                                                                                                                                       cgcATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtactgccagtttgatggtgcatcgcgacccggttgtt              >  1:585552‑M1/1‑18 (MQ=255)
                                                                                                                                                                                                                                         cATCACTGGCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtactgccagtttgatggtgcatcgcgacccggttgttcc            <  1:344096‑M1/251‑236 (MQ=255)
                                                                                                                                                                                                                                             aCTGGCACACAAttcacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtactgccagtttgatggtgcatcgcgacccggttgttccgggg        >  1:192069‑M1/1‑12 (MQ=255)
                                                                                                                                                                                                                                                ggCACCCAAttaacgctctgcggctagctactttcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtactgccagtttgatggtgcatcgcgacccggttgttccggggcgt     <  2:139228‑M1/251‑243 (MQ=255)
                                                                                                                                                                                                                                                ggCACACAAttaccgctctgcggctatctactaccccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtactgccagtttgatggtgcagcgcgacccggttgttccggggcg      <  2:99038‑M1/250‑242 (MQ=255)
                                                                                                                                                                                                                                                ggCACACAAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaccagattacatcagcggcattgccaaacgcacaatgctaatcaacggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtactgccagtttgatggagcatagcgacccggttgttccggggcgt     >  1:101535‑M1/1‑9 (MQ=255)
                                                                                                                                                                                                                                                   acacaAttaacgctctgcggctatctactatcccttctttttcagaaaaaccgccgagcatgtcggcggctttctgacttacaaagtaacagattacatcagcggcattgccaaacgcacaatgctaatcagcggttgtggccatacacccagcaccagtaccaacagtgcagagatcagcacaacgataccgcccgcgctgtactgccagtttgatggtgcatcgcgacccggttgttccggggcgtgaa  <  1:331451‑M1/251‑246 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                     
CCAGTACGTTGAATACATCACCAATATCCGTATGCAGGCAGTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGATGGCCCGCGTTACCCTGCGCATCACTGGCACACAACTGCTGTGCCAGGATGAACACCCTTCCCTTCTGGCGGCGCTGGAATCCCACAATGTGGCGGTTGAGTACCAGTGTCGCGAAGGTTACTGCGGCTCCTGTCGCACACGCCTGGTTGCAGGTCAAGTTGACTGGATTGCCGAACCGTTAGCCTTTATTCAGCCGGGGGAAATTTTGCCCTGTTGTTGCCGGGCAAAAGGCGATATTGAAATCGAGATGTGAATTGGTTGTAGTGCCAGATACAACGC  >  NC_000913/2348301‑2348794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: