| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,488,473 | Δ111,735 bp | yjgR–yjjA | 100 genes yjgR, idnR, idnT, idnO, idnD, idnK, ahr, leuX, insC6, insD6, yjgZ, insG, nanX, nanY, ythA, insO, insI3, insO, insO, fecE, fecD, fecC, fecB, fecA, fecR, fecI, ykiE, insA7, yjhU, yjhF, yjhG, yjhH, yjhI, sgcR, sgcE, sgcA, ryjB, sgcQ, sgcC, sgcB, sgcX, yjhP, yjhQ, topAI, ythB, nanS, nanM, nanC, fimB, fimE, fimA, fimI, fimC, fimD, fimF, fimG, fimH, gntP, uxuA, uxuB, uxuR, yjiC, ytiC, ytiD, idlP, iraD, hypT, iadA, yjiG, yjiH, kptA, yjiJ, yjiK, ytiA, yjiL, yjiM, yjiN, mdtM, ytiE, yjiR, yjiS, yjiT, mcrC, mcrB, mcrB, symE, symR, hsdS, hsdM, hsdR, mrr, yjiA, yjiX, btsT, tsr, lgoT, lgoR, lgoD, opgB, yjjA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4488473 | 4600207 | 111735 | 60 [0] | [0] 60 | yjgR–yjjA | yjgR,idnR,idnT,idnO,idnD,idnK,ahr,leuX,insC6,insD6,yjgZ,insG,nanX,nanY,ythA,insO,insI3,insO,insO,fecE,fecD,fecC,fecB,fecA,fecR,fecI,ykiE,insA7,yjhU,yjhF,yjhG,yjhH,yjhI,sgcR,sgcE,sgcA,ryjB,sgcQ,sgcC,sgcB,sgcX,yjhP,yjhQ,topAI,ythB,nanS,nanM,nanC,fimB,fimE,fimA,fimI,fimC,fimD,fimF,fimG,fimH,gntP,uxuA,uxuB,uxuR,yjiC,ytiC,ytiD,idlP,iraD,hypT,iadA,yjiG,yjiH,kptA,yjiJ,yjiK,ytiA,yjiL,yjiM,yjiN,mdtM,ytiE,yjiR,yjiS,yjiT,mcrC,mcrB,mcrB,symE,symR,hsdS,hsdM,hsdR,mrr,yjiA,yjiX,btsT,tsr,lgoT,lgoR,lgoD,opgB,yjjA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4488472 | 0 (0.000) | 60 (0.890) | 53/488 | 0.2 | 100% | intergenic (+72/+89) | lptG/yjgR | lipopolysaccharide transport system protein LptG/DUF853 domain‑containing protein YjgR |
| ? | NC_000913 | 4600208 = | 0 (0.000) | intergenic (‑19/+30) | yjjA/dnaC | DUF2501 domain‑containing protein YjjA/DNA replication protein DnaC | |||||
TGCCTGCGGCATTGTTCATGTTATCTGCGCTTAAGGCCTGGTTTCCGCTGCTAAGCAAGTTAGTTAATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACAGAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCG‑CAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTCGATTCGGTCTG > NC_000913/4599958‑4600456 | ggtatcgaggggtgtgcgttggttcaccggtttctgtttcggttttgtcttcaacttccgggaccagaccttcggcgcgcggacgtgggtttatggaatcccgccgagcatcgtcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgat < 2:474736‑M2/1‑1 (MQ=255)ggtaccgatgggcgggcgtgtggccaccggtatcgttttcggttttgtcttctacgtcctggaccagatcttgggcccgctgccgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgat < 2:402724‑M2/1‑1 (MQ=255)cgtaccgatgggcgtgcgtgtggtcaccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgat < 1:259915‑M2/1‑1 (MQ=255) cgtgtggtcaccggtatcagtttcggttttgtcttctacggactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagctaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATAcc < 1:549986‑M2/17‑1 (MQ=255) gtcaccggtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGcc > 1:320932‑M2/229‑248 (MQ=255) cccggtatcagtttcggttttgtcttctacgtactggaccagatcgtcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAAc < 1:250223‑M2/26‑1 (MQ=255) cggtatcggtttcggttttttcttctccgttctggaccagatcttcggcccgctgacgttgtttaatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctcccttgattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACgg < 2:320040‑M2/28‑1 (MQ=255) gtatcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGACACgggg > 1:211147‑M2/222‑251 (MQ=255) atcagtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgtgggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattggtagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGAt < 1:342341‑M2/32‑1 (MQ=255) agcagtttcggttttgtcttctacgtactggaccagatcgtcggcccgctgacgttggtgtatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgtgcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGAt < 1:341350‑M2/32‑1 (MQ=255) agtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatccgcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcatttctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTa > 2:455143‑M2/217‑250 (MQ=255) gtttcggttttgtcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAAt < 1:223559‑M2/36‑1 (MQ=255) tcttctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTg > 1:149770‑M2/204‑251 (MQ=255) ctacgtactggaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTAc > 2:123235‑M2/200‑251 (MQ=255) gaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattcttgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCCGAAACGGGGCTTAATACTCTTTACCTGTTACCCGGCTACgg > 1:353550‑M2/190‑251 (MQ=255) gaccagatcttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgacaagcgccagcttcttcttaatcagcctgtggctgttaatgagcaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACgg > 1:378211‑M2/190‑251 (MQ=255) tcttcggcccgctgactttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTa < 2:343656‑M2/68‑1 (MQ=255) cttcggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATc > 1:415806‑M2/182‑251 (MQ=255) tctgccagctgacgttgttttatggcagcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgtgaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGTGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATc < 1:402283‑M2/70‑1 (MQ=255) ggcccgctgacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTAACTGTTACCCGGCTACGGTAGCTATccc > 1:537559‑M2/178‑249 (MQ=255) gctgacgttggtttatggcataccgccgatcatcggcgcactgttgccaagcgacagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagaaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGa > 1:540730‑M2/173‑250 (MQ=255) gacgttggtttatggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGAt < 1:539089‑M2/82‑1 (MQ=255) tggtttatggcaccccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaaggagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCAcc < 2:529244‑M2/86‑1 (MQ=255) atggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAAc < 2:428898‑M2/93‑1 (MQ=255) ggcatcccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGTTAGCTATCCCAGTTGAAGATCACCCACACACTg > 1:517662‑M2/157‑251 (MQ=255) ccgccgatcatcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTAccc < 2:415806‑M2/101‑1 (MQ=255) atcggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATa < 2:178508‑M2/110‑1 (MQ=255) cggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTGCCTGTTACCCGGCTACGGTAGCTATCCCAGTGGAAGATCACCCACAATCTGTTACCCAGGCGCATACg < 2:550922‑M2/112‑1 (MQ=255) ggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGt < 1:153956‑M2/49‑1 (MQ=255) ggcgcactgttgccaagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGt > 2:153956‑M2/139‑187 (MQ=255) aatcgccagcttcttattaagcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgattaaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTCCCTGTTACCCGGCTACGGTAGCTGTCCCAGTTGAAGATCACCCACAAACGGTTTCCCAGGCGCATACGGTACATCACGCGTTc < 2:253815‑M2/127‑1 (MQ=255) aagcgccagcttcttcttaatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTc > 1:103432‑M2/125‑251 (MQ=255) taatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGt < 1:168735‑M2/142‑1 (MQ=255) aatcagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCCACTTGgtcct > 2:475113‑M2/107‑249 (MQ=255) cagcctgtggctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCAtct < 1:440107‑M2/147‑1 (MQ=255) ctgttaatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATAtt > 2:421710‑M2/94‑250 (MQ=255) aatgagaaaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGtt > 2:166950‑M2/89‑251 (MQ=255) aaatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGc > 1:154409‑M2/82‑251 (MQ=255) aatcgtaaccgaatgaacgaataaagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGc > 2:428318‑M2/81‑250 (MQ=255) gtaaccgaatgaacgaataaagggagctaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATccc < 2:434528‑M2/175‑1 (MQ=255) aagggagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGgaaga > 2:295209‑M2/58‑250 (MQ=255) gggagcgaaagctccctttattattgttagcaaagtgtgcttcggtcattcctgaTGTGTCGCCAGTATACCGCCATAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTAGCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTGCGCCCAGCAACTTGGTCAGCTCGTCCATATGACTTTTGGGCATCATCCCGTTTGGGCGTTTGGAagaaga < 2:540730‑M2/196‑1 (MQ=255) gagcgaaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCCTATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgc > 1:567257‑M2/54‑251 (MQ=255) aaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAgcggcg > 1:558879‑M2/49‑250 (MQ=255) aaagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCAAGACACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCACAGTTGGAGATCACCAACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCCTCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGCAGAgcggcg > 2:88621‑M2/49‑250 (MQ=255) aaagctccctttattattgttagcaaaaagtgcttcgcttattcctgaTGTGTCGACAGTATACCGCCAGAAACGGGGATTAATACTCTTTCACTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACACACAAACTGTTACCCAGGCGCATACGGTCCATCACGCATTCGCCCAGCAAATTGGTCATCTCTTCCATATTAATTTTGGTCAGCATCCAGGTTGGGCGTTTGGAAGAAGtgcggcgt > 2:53228‑M2/49‑250 (MQ=255) aagctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGAt > 1:461529‑M2/48‑251 (MQ=255) gctccctttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATcg < 1:492688‑M2/206‑1 (MQ=255) ttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGAt < 1:198737‑M2/211‑1 (MQ=255) ttattattgttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCt > 1:353977‑M2/39‑251 (MQ=255) gttagcaaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTtgat < 2:149770‑M2/220‑1 (MQ=255) ttagcaaagtgtgcttcgttcattccttaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCGTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTtgatg < 2:456629‑M2/221‑1 (MQ=255) caaagtgtgcttcgttcattcctgaTGTGTCGCCAGTATGCCGCCAGAAACGGGGATTAATTCTCTTTACCTGTTTCCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCGTCCATATTACTGTTGGTCAGCATCCCGGTTGGTCGGTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCAc < 1:405140‑M2/226‑1 (MQ=255) gtgtgcttcgttcattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACtttt > 1:172487‑M2/22‑251 (MQ=255) cattcctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTCGAt > 1:94970‑M2/10‑251 (MQ=255) ctgaTGTGTCGCCAGTATACCGCCAGCAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATc > 2:92252‑M2/5‑216 (MQ=255) ctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCcaca > 2:288315‑M2/5‑94 (MQ=255) ctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATc < 1:92252‑M2/212‑1 (MQ=255) ctgaTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACGCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCcaca < 1:288315‑M2/90‑1 (MQ=255) aTGTGTCGCCAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTCGATTCGGTctc > 1:183401‑M2/2‑250 (MQ=255) | TGCCTGCGGCATTGTTCATGTTATCTGCGCTTAAGGCCTGGTTTCCGCTGCTAAGCAAGTTAGTTAATGACGCGAGCGACCAACCGCCTTCCTGTGTCGTGCTGTTTTGGTTGCCAAGTTCGCTGGCGGCGCTGGAGAGCGCATCTTTCCAGGACGCAGCATGCACCCCGGTGGAAATTAATGCGCTGGCGGCAATGGCACAGCACAGAAGATGTTTAACAGTTTTCATCATCATTACTCAAGGTGGAATTGTGTCG‑CAGTATACCGCCAGAAACGGGGATTAATACTCTTTACCTGTTACCCGGCTACGGTAGCTATCCCAGTTGAAGATCACCCACAAACTGTTACCCAGGCGCATACGGTCCATCACGCGTTCGCCCAGCAACTTGGTCATCTCTTCCATATTACTGTTGGTCAGCATCCCGGTTGGGCGTTTGGAAGAAGAGCGGCGATCGACGATCTGGTTGATGATCACTTTTTCGTATTTCGATTCGGTCTG > NC_000913/4599958‑4600456 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |