| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,488,473 | Δ111,735 bp | yjgR–yjjA | 100 genes yjgR, idnR, idnT, idnO, idnD, idnK, ahr, leuX, insC6, insD6, yjgZ, insG, nanX, nanY, ythA, insO, insI3, insO, insO, fecE, fecD, fecC, fecB, fecA, fecR, fecI, ykiE, insA7, yjhU, yjhF, yjhG, yjhH, yjhI, sgcR, sgcE, sgcA, ryjB, sgcQ, sgcC, sgcB, sgcX, yjhP, yjhQ, topAI, ythB, nanS, nanM, nanC, fimB, fimE, fimA, fimI, fimC, fimD, fimF, fimG, fimH, gntP, uxuA, uxuB, uxuR, yjiC, ytiC, ytiD, idlP, iraD, hypT, iadA, yjiG, yjiH, kptA, yjiJ, yjiK, ytiA, yjiL, yjiM, yjiN, mdtM, ytiE, yjiR, yjiS, yjiT, mcrC, mcrB, mcrB, symE, symR, hsdS, hsdM, hsdR, mrr, yjiA, yjiX, btsT, tsr, lgoT, lgoR, lgoD, opgB, yjjA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4488473 | 4600207 | 111735 | 60 [0] | [0] 60 | yjgR–yjjA | yjgR,idnR,idnT,idnO,idnD,idnK,ahr,leuX,insC6,insD6,yjgZ,insG,nanX,nanY,ythA,insO,insI3,insO,insO,fecE,fecD,fecC,fecB,fecA,fecR,fecI,ykiE,insA7,yjhU,yjhF,yjhG,yjhH,yjhI,sgcR,sgcE,sgcA,ryjB,sgcQ,sgcC,sgcB,sgcX,yjhP,yjhQ,topAI,ythB,nanS,nanM,nanC,fimB,fimE,fimA,fimI,fimC,fimD,fimF,fimG,fimH,gntP,uxuA,uxuB,uxuR,yjiC,ytiC,ytiD,idlP,iraD,hypT,iadA,yjiG,yjiH,kptA,yjiJ,yjiK,ytiA,yjiL,yjiM,yjiN,mdtM,ytiE,yjiR,yjiS,yjiT,mcrC,mcrB,mcrB,symE,symR,hsdS,hsdM,hsdR,mrr,yjiA,yjiX,btsT,tsr,lgoT,lgoR,lgoD,opgB,yjjA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4488472 | 0 (0.000) | 60 (0.890) | 53/488 | 0.2 | 100% | intergenic (+72/+89) | lptG/yjgR | lipopolysaccharide transport system protein LptG/DUF853 domain‑containing protein YjgR |
| ? | NC_000913 | 4600208 = | 0 (0.000) | intergenic (‑19/+30) | yjjA/dnaC | DUF2501 domain‑containing protein YjjA/DNA replication protein DnaC | |||||
CGTACCGATGGGCGTGCGTGTGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAGCGGCGCTTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAAT > NC_000913/4488223‑4488722 | ggtatcgaggggtgtgcgttggttcaccggtttctgtttcggttttgTCTTCAACTTCCGGGACCAGACCTTCGGCGCGCGGACGTGGGTTTATGGAATCCCGCCGAGCATCGTCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAt < 2:474736‑M1/228‑2 (MQ=255)ggtACCGATGGGCGGGCGTGTGGCCACCGGTATCGTTTTCGGTTTTGTCTTCTACGTCCTGGACCAGATCTTGGGCCCGCTGCCGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAt < 2:402724‑M1/250‑2 (MQ=255)cGTACCGATGGGCGTGCGTGTGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAt < 1:259915‑M1/251‑2 (MQ=255) cgtgTGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGGACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCTAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtatacc < 1:549986‑M1/251‑18 (MQ=255) gTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgcc > 1:320932‑M1/1‑228 (MQ=255) cccgGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCGTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaac < 1:250223‑M1/250‑27 (MQ=255) cGGTATCGGTTTCGGTTTTTTCTTCTCCGTTCTGGACCAGATCTTCGGCCCGCTGACGTTGTTTAATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTGATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacgg < 2:320040‑M1/251‑29 (MQ=255) gTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagacacgggg > 1:211147‑M1/1‑221 (MQ=255) agcagTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCGTCGGCCCGCTGACGTTGGTGTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTGCATTCCTGAtgtgtcgccagtataccgccagaaacggggat < 1:341350‑M1/249‑33 (MQ=255) aTCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTGGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGGTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggat < 1:342341‑M1/251‑33 (MQ=255) aGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCCGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTTCTGAtgtgtcgccagtataccgccagaaacggggatta > 2:455143‑M1/1‑216 (MQ=255) gTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaat < 1:223559‑M1/251‑37 (MQ=255) tcttctACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctg > 1:149770‑M1/1‑203 (MQ=255) ctACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttac > 2:123235‑M1/1‑199 (MQ=255) gACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTCTTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgcccgaaacggggcttaatactctttacctgttacccggctacgg > 1:353550‑M1/1‑189 (MQ=255) gACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGACAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGCAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacgg > 1:378211‑M1/1‑189 (MQ=255) tCTTCGGCCCGCTGACTTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagcta < 2:343656‑M1/250‑69 (MQ=255) cTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatc > 1:415806‑M1/1‑181 (MQ=255) tctgccagctgacgtTGTTTTATGGCAGCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTGAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggtgattaatactctttacctgttacccggctacggtagctatc < 1:402283‑M1/242‑71 (MQ=255) ggCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttaactgttacccggctacggtagctatccc > 1:537559‑M1/1‑177 (MQ=255) gCTGACGTTGGTTTATGGCATACCGCCGATCATCGGCGCACTGTTGCCAAGCGACAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGAAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttga > 1:540730‑M1/1‑172 (MQ=255) gACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagat < 1:539089‑M1/251‑83 (MQ=255) tGGTTTATGGCACCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAAGGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacc < 2:529244‑M1/250‑87 (MQ=255) aTGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaac < 2:428898‑M1/251‑94 (MQ=255) ggCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacgttagctatcccagttgaagatcacccacacactg > 1:517662‑M1/1‑156 (MQ=255) ccgccgATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttaccc < 2:415806‑M1/251‑102 (MQ=255) atcGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcata < 2:178508‑M1/251‑111 (MQ=255) cGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttgcctgttacccggctacggtagctatcccagtggaagatcacccacaatctgttacccaggcgcatacg < 2:550922‑M1/251‑113 (MQ=255) ggCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgt < 1:153956‑M1/187‑50 (MQ=255) ggCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgt > 2:153956‑M1/1‑138 (MQ=255) aatcgccagCTTCTTATTAAGCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGATTAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttccctgttacccggctacggtagctgtcccagttgaagatcacccacaaacggtttcccaggcgcatacggtacatcacgcgttc < 2:253815‑M1/248‑128 (MQ=255) aaGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttc > 1:103432‑M1/1‑124 (MQ=255) tAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggt < 1:168735‑M1/249‑143 (MQ=255) aaTCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagccacttggtcct > 2:475113‑M1/1‑106 (MQ=255) cAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatct < 1:440107‑M1/250‑148 (MQ=255) cTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatatt > 2:421710‑M1/1‑93 (MQ=255) aaTGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgtt > 2:166950‑M1/1‑88 (MQ=255) aaaTCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagc > 1:154409‑M1/1‑81 (MQ=255) aaTCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagc > 2:428318‑M1/1‑80 (MQ=255) gTAACCGAATGAACGAATAAAGGGAGCTAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatccc < 2:434528‑M1/251‑176 (MQ=255) aaGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaaga > 2:295209‑M1/1‑57 (MQ=255) gggAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGGTCATTCCTGAtgtgtcgccagtataccgccataaacggggattaatactctttacctgttacccggctacggtagctagcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgtgcgcccagcaacttggtcagctcgtccatatgacttttgggcatcatcccgtttgggcgtttggaagaaga < 2:540730‑M1/251‑197 (MQ=255) gAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccctattactgttggtcagcatcccggttgggcgtttggaagaagagc > 1:567257‑M1/1‑53 (MQ=255) aaaGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcg > 1:558879‑M1/1‑48 (MQ=255) aaaGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgcaagacacggggattaatactctttacctgttacccggctacggtagctatcacagttggagatcaccaacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcctctcttccatattactgttggtcagcatcccggttgggcgtttggaagcagagcggcg > 2:88621‑M1/1‑48 (MQ=255) aaaGCTCCCTTTATTATTGTTAGCAAAAAGTGCTTCGCTTATTCCTGAtgtgtcgacagtataccgccagaaacggggattaatactctttcactgttacccggctacggtagctatcccagttgaagatcacacacaaactgttacccaggcgcatacggtccatcacgcattcgcccagcaaattggtcatctcttccatattaattttggtcagcatccaggttgggcgtttggaagaagtgcggcgt > 2:53228‑M1/1‑48 (MQ=255) aaGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgat > 1:461529‑M1/1‑47 (MQ=255) gCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcg < 1:492688‑M1/251‑207 (MQ=255) ttattaTTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatct > 1:353977‑M1/1‑38 (MQ=255) ttattaTTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgat < 1:198737‑M1/249‑212 (MQ=255) gTTAGCAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgat < 2:149770‑M1/250‑221 (MQ=255) ttAGCAAAGTGTGCTTCGTTCATTCCTTAtgtgtcgccagtataccgccagaaacggggattaatactcgttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatg < 2:456629‑M1/250‑222 (MQ=255) cAAAGTGTGCTTCGTTCATTCCTGAtgtgtcgccagtatgccgccagaaacggggattaattctctttacctgtttcccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcgtccatattactgttggtcagcatcccggttggtcggttggaagaagagcggcgatcgacgatctggttgatgatcac < 1:405140‑M1/251‑227 (MQ=255) gtgtGCTTCGTTCATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcactttt > 1:172487‑M1/1‑21 (MQ=255) cATTCCTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcactttttcgtatttcgat > 1:94970‑M1/1‑9 (MQ=255) cTGAtgtgtcgccagtataccgccagcaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatc > 2:92252‑M1/1‑4 (MQ=255) cTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatc < 1:92252‑M1/216‑213 (MQ=255) cTGAtgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccaca > 2:288315‑M1/1‑4 (MQ=255) cTGAtgtgtcgccagtataccgccagaaacggggattaatacgctttacctgttacccggctacggtagctatcccagttgaagatcacccaca < 1:288315‑M1/94‑91 (MQ=255) atgtgtcgccagtataccgccagaaacggggattaatactctttacctgttacccggctacggtagctatcccagttgaagatcacccacaaactgttacccaggcgcatacggtccatcacgcgttcgcccagcaacttggtcatctcttccatattactgttggtcagcatcccggttgggcgtttggaagaagagcggcgatcgacgatctggttgatgatcactttttcgtatttcgattcggtctc > 1:183401‑M1/1‑1 (MQ=255) | CGTACCGATGGGCGTGCGTGTGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAACCGAATGAACGAATAAAGGGAGCGAAAGCTCCCTTTATTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAGCGGCGCTTTTGGCCATTGTTTGCACCACACCATCTTTCTTCCCGCCGCGTGGTCCGGTAGTGCCGAACAAAATATCCTTCAATCCACCAAGAAT > NC_000913/4488223‑4488722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |