Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp insB9–[crl] insB9, insA9, [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908 258683 776 62 [0] [2] 63 insB9–[crl] insB9,insA9,[crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)61 (0.990) 56/470 0.1 100% intergenic (+8/+16) crl/insB9 RNA polymerase holoenzyme assembly factor Crl/IS1 family transposase B
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl RNA polymerase holoenzyme assembly factor Crl

CCTCATCATCTGCTGACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTC  >  NC_000913/257659‑258147
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                
ccTCATCATCTGCTGACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAa                                                                                                                                                                                                                                                 <  1:148316‑M1/250‑2 (MQ=255)
      catcTGCTGACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTGAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAATAGCAGATTGATCATAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaa                                                                                                                                                                                                                                           <  1:516689‑M1/250‑8 (MQ=255)
      catcTGCTGACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaa                                                                                                                                                                                                                                           >  1:268663‑M1/1‑243 (MQ=255)
           gctgACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGAGCAAAAAAAGTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaag                                                                                                                                                                                                                                         <  1:526910‑M1/247‑10 (MQ=255)
              gacgggatattattAGAGATCCCATTTAACCCGGTGTATAGGAATTTTGACAAAGGGCTTCAGGCAATAACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCGAATTTGGTAAAACCGTTGCATCACAACAGGAGAGAGGAACGACGTTACCGAGTGGACACCCGACGGGCGGATTGATCGATACACTTACCGCACTAGGCCCGTATTATT‑GTGAaggtaagggaaaagataatcg                                                                                                                                                                                                                                  >  2:6915/9‑235 (MQ=255)
              gACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcg                                                                                                                                                                                                                                  >  1:169872‑M1/1‑235 (MQ=255)
                 ggTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgatt                                                                                                                                                                                                                               <  1:427184‑M1/251‑20 (MQ=255)
                                    cATTTAACCCGGTGGATCGGAATTTTGACCAAGGCCTTCAGGAAATCACCGACTGGATCGAACAACGCTTGTGTTAAAAATTTACTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGAAagtgaaaagataatcgattctttttcgattgtctgtct                                                                                                                                                                                                            >  2:241971‑M1/1‑213 (MQ=255)
                                     aTTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctg                                                                                                                                                                                                           >  2:31572‑M1/1‑212 (MQ=255)
                                     aTTTAACCAGGTGTATCGGAATTTTGAAAAAGGTCTTCAGGCTATCACCGACTGGATAGAACAACGATTGTGTTAAAAATTTGCTAAATTTTGAAAATTTGGCAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATAAAAAAATTTAACGCACTAGGCCGGCAT‑ATTCGTGAAGGTAagggcaaagataatagattcttgttcgtttgtctggctg                                                                                                                                                                                                           >  1:502042‑M1/1‑212 (MQ=255)
                                        tAACCCGGTGTATCGGAATTCTGACAAAGGACTTCACGAAATCACCGACCGGACCGCAAAACGCTTGTGTTACACATTTGCTCAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgcttctttttcgattgtctggctgtat                                                                                                                                                                                                        >  2:526669‑M1/1‑209 (MQ=255)
                                         aaCCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatg                                                                                                                                                                                                       <  2:571649‑M1/251‑44 (MQ=255)
                                         aaCCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataaacgattctttttcgattgtctggctgtatg                                                                                                                                                                                                       <  2:268663‑M1/251‑44 (MQ=255)
                                                       gAATTTTGAAAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATGTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGCGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATGTACCGCACTAGGACCCTAT‑ATTCGTGAAGGTAagtgcaaatataatcgagtctttgacgattgtctggctggatgcgtcaatgtgaaac                                                                                                                                                                                         <  2:279554‑M1/251‑58 (MQ=255)
                                                        aaTTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATGTGCTAAATTTTGCCAAGTTGGTAAAACAGTTGCATCACAACAGTAGATAGCAATGACGTTACCGAGTGGTCACCCGAAGAGCAGATTGATCAAAAAATTTACCGCTCTAGGCCCGTAG‑AGGCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaacc                                                                                                                                                                                        <  1:288423‑M1/251‑59 (MQ=255)
                                                             tGACAAAGGTCTTCAGGCAATCACCGACTGGCTAGAAAAACGCTTGTGTTAAACATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcac                                                                                                                                                                                   >  2:335931‑M1/1‑188 (MQ=255)
                                                                              aaaTCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattc                                                                                                                                                                  <  1:20607‑M1/251‑81 (MQ=255)
                                                                                    ccGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggc                                                                                                                                                            <  1:405330‑M1/251‑87 (MQ=255)
                                                                                       aCTGGATAGAAAAAAGCTTGTGTTAAAAATTGGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCAAAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGTTCAAAAATTTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAggtgaaaagataatcgtttctttttcgatggtctggctgtatgcgtcaacgtgaaaccggaaccggaagtgcgtgaattctggggctgg                                                                                                                                                         >  1:452846‑M1/1‑162 (MQ=255)
                                                                                                  aaaCGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAACACAGTTGCATCACAAAAGGAGATAGCACTGACGTTCCCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagct                                                                                                                                              >  1:538513‑M1/1‑151 (MQ=255)
                                                                                                      gCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctgga                                                                                                                                           >  1:510010‑M1/1‑147 (MQ=255)
                                                                                                                aaaaTTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACACCAGGAGATAGCAATGAAGTTACCGCGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaat                                                                                                                                >  1:500031‑M1/1‑137 (MQ=255)
                                                                                                                  aaTTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGACTCAAAAAAGGCGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAACATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggcgctggaagcgcaggaatcc                                                                                                                              >  1:51733‑M1/1‑135 (MQ=255)
                                                                                                                      tGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTCCCGCGTGGACACACGAAGAGCAGCTTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgtt                                                                                                                          >  1:546949‑M1/1‑131 (MQ=255)
                                                                                                                       gCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttt                                                                                                                         >  1:225680‑M1/1‑130 (MQ=255)
                                                                                                                          aaaTTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCATTGACGGTACCGAGTGGACACCAGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGAAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttac                                                                                                                      >  1:71242‑M1/1‑127 (MQ=255)
                                                                                                                            aTTTTGCAAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacct                                                                                                                    >  1:444439‑M1/1‑125 (MQ=255)
                                                                                                                                 gCCAATTTGGTAAAACAGTTGCATCGCAACAGGAGATAGCAAGGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattcttgttcgattgtctggctgtatgcgtcagcgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacag                                                                                                                <  2:4932‑M1/250‑131 (MQ=255)
                                                                                                                                    aaTTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaagtctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttac                                                                                                            <  2:416953‑M1/251‑135 (MQ=255)
                                                                                                                                       ttGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataagcgatgcttgttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccgtaagtgcgtgaattctgtggcttgtggatggagcgggaagcgcaggaatcccgttttacctacagttacca                                                                                                          <  1:525672‑M1/250‑137 (MQ=255)
                                                                                                                                          gTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTAAAGGAAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagagcgtgaattctggggctggtggatggagctggaagcgcaggcatcccgttttacctacagttaccagttt                                                                                                      >  1:419336‑M1/1‑111 (MQ=255)
                                                                                                                                               aCAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtct                                                                                                 <  1:124513‑M1/251‑146 (MQ=255)
                                                                                                                                                   ttGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccgtaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttaccta                                                                                                                   <  1:53524‑M1/229‑128 (MQ=255)
                                                                                                                                                   ttGCACCACAACAGGAGATAGCAATGACGTTACCGAGTGGCCACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttaccta                                                                                                                   >  2:53524‑M1/1‑102 (MQ=255)
                                                                                                                                                             acaGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTTGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagc                                                                                     >  1:324964‑M1/1‑92 (MQ=255)
                                                                                                                                                             acaGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagc                                                                                     >  2:407218‑M1/1‑92 (MQ=255)
                                                                                                                                                               aGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaagtctggggcttgtggatggagctggaagcgcaggaatcccgttttgcctacagttaccagtttggtctgttcgataaagcaggc                                                                                 <  1:99102‑M1/251‑162 (MQ=255)
                                                                                                                                                                      aGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactgga                                                                          <  2:192523‑M1/251‑169 (MQ=255)
                                                                                                                                                                            gACGTTACCGAGTGGACCCCCGAAGAGCCGATTGATCACAAAATTTACAGCACTAGGCCCGTAT‑ATTCGAGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggacgtgcgtgaattctggggctggtggatggagctggaagcgcaggactcccgttttacctacagttaccagtttggtctgttcgatcaagcaggcgactggaagagtg                                                                    >  2:262480‑M1/1‑77 (MQ=255)
                                                                                                                                                                               gTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttc                                                                 >  1:60597‑M1/1‑74 (MQ=255)
                                                                                                                                                                                  aCCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccg                                                               <  1:436710‑M1/250‑180 (MQ=255)
                                                                                                                                                                                   ccGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggt                                                             <  1:15081‑M1/251‑182 (MQ=255)
                                                                                                                                                                                             acCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagggcgtgaattctggggctggtggatggagctggaagcgcaggaatcgcgtttaacctacaggtaccagtgtgggctgttcgagaaagcaggcggctggaagaatgttcctgtaaaagacact                                                   <  2:285571‑M1/251‑192 (MQ=255)
                                                                                                                                                                                              cccGAAGAGCAGATTGATCAAAAAATTTACCGCACTTGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactg                                                  <  2:324964‑M1/251‑193 (MQ=255)
                                                                                                                                                                                                       cAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttg                                         >  2:11734‑M1/1‑50 (MQ=255)
                                                                                                                                                                                                         gATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttga                                        >  2:188524‑M1/1‑48 (MQ=255)
                                                                                                                                                                                                          aTTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaac                                      <  2:169872‑M1/251‑205 (MQ=255)
                                                                                                                                                                                                          aTTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaac                                      <  1:309656‑M1/251‑205 (MQ=255)
                                                                                                                                                                                                              aTCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaacgact                                  <  2:112078‑M1/251‑209 (MQ=255)
                                                                                                                                                                                                                cAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTCactgcaaagataatcgattctttttagattgtctggctgtatgcgtcaccgtgaaacaggcaccggaagtgcgtgaattctggggctggtggctggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggcagagtgttccggtcaaagacactgaagtggttgaacgactgg                                >  1:533874‑M1/1‑41 (MQ=255)
                                                                                                                                                                                                                   aaaaTTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagttgggtctgttcgataaagcaggcgactggaagagtgttgcggtaaaagacactgaagtggttgaacgactggagc                             <  1:262480‑M1/251‑214 (MQ=255)
                                                                                                                                                                                                                          aCCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaacgactggagcacaccct                      >  1:198630‑M1/1‑31 (MQ=255)
                                                                                                                                                                                                                           ccGCACTAGGCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaacgactggagcacaccctg                     >  2:178188‑M1/1‑30 (MQ=255)
                                                                                                                                                                                                                            cGCACTAGGTCCGTAG‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattggctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaagtctggggctggtggatggagcgggaagcgcaggaatcccgttttacctacagttaccagtttggcctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaa                                                <  2:107945‑M1/223‑195 (MQ=255)
                                                                                                                                                                                                                                cTAGGCCCGGCT‑AGTCGTGAAGGGAagggcaaagataatcgattctttttcgattgtctggctgaatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgctaaagcaggcgactggaagagtgttccgggaaaagacactgaagtggttgaacgactggtgaccaccctgct                   >  2:56905‑M1/1‑25 (MQ=255)
                                                                                                                                                                                                                                   ggCCCGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaacgactggagcacaccctgcgtgagtt             >  1:420874‑M1/1‑22 (MQ=255)
                                                                                                                                                                                                                                   ggCCCGTAT‑ATTCGTGAACGTAagtgcacagctactcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttgccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaacgactggagcacaccctgcgtgagtt             >  2:357498‑M1/1‑22 (MQ=255)
                                                                                                                                                                                                                                      ccGTAT‑ATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaacgactggagcacaccctgcgtgagtttca          <  1:488686‑M1/251‑233 (MQ=255)
                                                                                                                                                                                                                                          at‑atTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaacgactggagcacaccctgcgtgagtttcacg        >  1:9189‑M1/1‑15 (MQ=255)
                                                                                                                                                                                                                                           t‑atTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagac                                                      >  2:321632‑M1/1‑14 (MQ=255)
                                                                                                                                                                                                                                           t‑atTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagac                                                      <  1:321632‑M1/202‑189 (MQ=255)
                                                                                                                                                                                                                                               tCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaacgactggagcacaccctgcgtgagtttcacgagaagc  >  2:264819‑M1/1‑11 (MQ=255)
                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                
CCTCATCATCTGCTGACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAT‑ATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCACGTC  >  NC_000913/257659‑258147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.