| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,756,159 | Δ33,804 bp | [intA]–[glaH] | 28 genes [intA], yfjH, alpA, yfjI, yfjJ, abpB, abpA, yfjM, rnlA, rnlB, yfjP, yfjQ, yfjR, ypjK, yfjS, yfjT, yfjU, yfjW, yfjX, yfjY, ypjJ, yfjZ, ypjF, ypjA, ypjB, ypjC, ileY, [glaH] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2756159 | 2789962 | 33804 | 69 [0] | [0] 70 | [intA]–[glaH] | [intA],yfjH,alpA,yfjI,yfjJ,abpB,abpA,yfjM,rnlA,rnlB,yfjP,yfjQ,yfjR,ypjK,yfjS,yfjT,yfjU,yfjW,yfjX,yfjY,ypjJ,yfjZ,ypjF,ypjA,ypjB,ypjC,ileY,[glaH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2756158 | 0 (0.000) | 69 (0.950) | 62/492 | 0.0 | 100% | intergenic (+203/‑1) | ssrA/intA | tmRNA/integrase IntA |
| ? | NC_000913 | 2789963 = | 0 (0.000) | intergenic (+1/‑19) | glaH/lhgD | glutarate dioxygenase GlaH/L‑2‑hydroxyglutarate dehydrogenase | |||||
AGTTCGTCCAGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAAGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCG > NC_000913/2789721‑2790213 | gaatttcggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgacgagaactaattaaatccgaaacttttaggcccattgataggcccaacgaaaagctcaattgtttccgttgggcctaaacgcagggagactccccGCGCCAAgg > 2:17459‑M2/243‑251 (MQ=255) aatttcggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAgg > 1:411519‑M2/242‑250 (MQ=255) cggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATtgg > 1:170525‑M2/237‑250 (MQ=255) ggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactacttaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaangcagggagactccccGCGCCAAGGACTTg > 2:284571‑M2/236‑249 (MQ=255) ggacgcgggttcaactcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagcctccccGCGCAAAGGAAttgcg > 2:553047‑M2/236‑249 (MQ=255) gtcaacccccgccagctccaccaaaattctccatcggtgattaccagagtcagccgatgaagtcctaagagcccgcccggcgcaagcccgtcgggcttttttgtgccctcaatttgtcccgcgaaggccgaagagaactaattaaagccgaaccttgtaggcccattgataggcccaacgaaaagcgctattgtttacgttgggcctaaacgcagggagactccccTCGCaaaggaattgatcgtatttat < 2:226586‑M2/25‑11 (MQ=255) cctcccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtctcgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagtgagactccccGCGCAAAGGAATTGAGCGGATGTATGAtt < 1:485668‑M2/29‑1 (MQ=255) cccccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGAttt < 1:454212‑M2/30‑1 (MQ=255) cccgccagctccaccaaaattctccatcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgcaccttttaggcccattgataggcccaacgaaacgctctaatgtttacgttgggcctaaacgcagggagactccccGCGCAAAGTAATTGAGCGGCTGGATGATTTtg > 2:550975‑M2/220‑251 (MQ=255) caccaaaattcgccagcggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagctctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaagccgaaccttttaggcccattgataggcccaactaaaagctctattgtttacgttgggcctaaacgcagggaggctccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTggc < 2:448572‑M2/43‑1 (MQ=255) ggtgattaccagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCAt > 1:554549‑M2/192‑251 (MQ=255) gattaccagagtcatccgatgaagtcctaagagcccgcccggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTc < 2:130904‑M2/63‑1 (MQ=255) taccagaatcatccgatgaagtcctaagagcccgcgcggctcaagccctgcgggctttgttgtgccctcaatgtgtcccgcgaagtccgaagagaagtaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgtttggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGa < 2:242814‑M2/65‑1 (MQ=255) accagagtcatccgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGAcc < 2:210575‑M2/67‑1 (MQ=255) gtcatccgatgaaggccaaagagcccgcacggggcaagccctgggggcttttttgtgccctcaatttgtcccgcgaagcccgaagagaactaataaaatccgacccttttaggcccattgataggcccaacaaaaagctctattgtttacgtggggcctaaacgcagggagcctccccGCGCAAAGGAATTGAGCGGATGTATGTTTTTGTGATTATTGGCGGCGGCATCATCGGCATGTGGACCGCCATg < 2:100254‑M2/73‑1 (MQ=255) cgatgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACtg > 1:225279‑M2/173‑251 (MQ=255) tgaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGCATTGAGCGGATGTATGATTTTGTGATGATTGGCGGCGGCATAATCGGCATGTCGACCGCCATGCAACtgatt > 2:444737‑M2/170‑251 (MQ=255) gaagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCACAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACtgattg > 2:234270‑M2/169‑251 (MQ=255) aagtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACtgattg > 1:131384‑M2/168‑250 (MQ=255) gtcctaagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATg < 2:170525‑M2/86‑1 (MQ=255) aagagcccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgacccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAACGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCCTCGGCATGTCGACCGCCATGCCACTGATTGTTGTCTAt > 2:543332‑M2/161‑251 (MQ=255) cccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgcagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGNCCGCCATGCCACTGATTGATGTATATCcggg > 2:297358‑M2/156‑250 (MQ=255) ccgcacggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCCAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGAc > 1:346128‑M2/155‑251 (MQ=255) ggcgcaagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatacgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGAATGTCGACCGCCATGCAACTGATTGTTGTCTATCCGGACGCCCGc > 1:249765‑M2/149‑251 (MQ=255) caagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCACAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGGCGAACGCCATGCAACTGATTGAAGTCTATCCGGACGCCCGCATTg > 2:554424‑M2/145‑251 (MQ=255) aagccctgcgggcttttttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCCTGCCACTGATTGATGTCTATCCGGACGCCCGCATTGc > 1:122285‑M2/144‑251 (MQ=255) gtgggtttttgtgtgccctcaatgttgcccgcgaagtccgaagagaactaattaaagccgatccttttaggcccattgataggcccatcgaaaagctctattgattacggtgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCt < 2:346128‑M2/114‑1 (MQ=255) ttgtgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGt > 1:173217‑M2/127‑251 (MQ=255) tgccctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGGATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCg > 2:195978‑M2/124‑251 (MQ=255) cctcaatttgtcccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGccc > 1:56860‑M2/121‑251 (MQ=255) cccgcgaagtccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCAc < 1:196750‑M2/142‑1 (MQ=255) ccgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGcc < 1:573677‑M2/152‑1 (MQ=255) cgaagagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggcgactcaccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCCTCATCGGCATGTCGACCGCCATGAAACTGATTGATGTATATACGGACGCCCGCCGTGCGTTTCTGGAAAAAGTGTCCGCCCCGGCCTGTCCCCAGAAGGGcc > 2:580557‑M2/99‑250 (MQ=255) gagaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCACCGGCATGTCGACCGCCATGCAAATGATTGAGTTCTTTCCGGACGCCCGCCTTGCGGTGCTGGAAAAAGAGTCCGCCCCGGGCTGTCACCAGACAGGCCacaa > 2:9560‑M2/95‑250 (MQ=255) aaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttccgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAg < 1:312903‑M2/159‑1 (MQ=255) aaactaattaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttactttgggcctaaacgcagggatactccccGCGCAAAGTAATTGAGCGGATGTATGATTTTGTGATTTTTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCGGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAg < 1:351544‑M2/159‑1 (MQ=255) aactaattaaatccgaaccgtttaggcctattgatgggcccaccgaaaagctctattttttacgttgggcctaaacgcagggagactccccGCGCAATGGATTTGAGCGGATTTATGATTTTGTGATTATTGGCGGCTGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTTTCCGGACGCCCGCATTGCGTTGCGGGAAAAAGAGTCCGCCCCGGCCTGTCTCCAGACGGGCCACAACAgc < 1:76141‑M2/160‑1 (MQ=255) aattaaatccgaaccttttaggcccattgatatgcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGTATTGAGCGGATGTATGATTTTGTGAATTTTGGCGGCGGCATCATCGGCATGTTGACCGCCATGCAACTGCTTTGTGCCTATCCCGTCACCCGCATTGCGTTGCTGGCAAAAGAGTCGGCCCCGGCCTTTCACCAGAacggccacaacaacgacg > 2:545247‑M2/88‑245 (MQ=255) attaaatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGNCCCGTCACCAGCCGGGCCCCAACagcggcgg > 2:290388‑M2/87‑250 (MQ=255) aatccgaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATc < 1:234270‑M2/169‑1 (MQ=255) gaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACCGCGGCGTGAACCATGc > 1:498970‑M2/78‑251 (MQ=255) gaaccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCCTGc > 1:121020‑M2/78‑251 (MQ=255) accttttaggcccattgataggcacaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGGCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCAAAACAGCGGCGTGCTCCATGCCg > 1:40510‑M2/76‑251 (MQ=255) ccttttaggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCCTGCCgg > 1:15177‑M2/75‑251 (MQ=255) ggcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTAt > 1:488125‑M2/68‑251 (MQ=255) gcccattgataggcccaacgaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGCTTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCAAAACAGCGGCGGGATCCATGCCGGGGTCTAtt > 1:356870‑M2/67‑251 (MQ=255) cgacgcgcgtccgatctaagttctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTAGTATTTTGTGATTATTGGCGGCGGCATCATCGGCAGGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACg < 2:61297‑M2/190‑1 (MQ=255) ccaacgaaaacctatagtgttttcgttgggcctaaacgcagggagcccccccGCGCAAAGGAATTGAGCGAATGTATGATTTTGTGATTATTGGCGGCGGCATCACCGGCATGTCGACCGCCATGCAACGGATTGATGTCTATCCGGACGCCCGCGTTGCGTTGCTGGAAAAAGGGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGc < 2:99896‑M2/199‑1 (MQ=255) caacaaaaagctcttttgtttacgttgggccaaaacgaggggagaccccccGCGCAAAGAAATTGGGCGGATGTATGATTTTGTGATTATTGGCGGCGCCATCACCGGCATGTCGACCGCCATGCAACTGATTGATGTCTACCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCCCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGcc < 2:530359‑M2/200‑1 (MQ=255) cctaaaagctctattttttacgttgggcctaaccgcagggaaaccccccGCGCAAGGGAATTGAGGGGATGTATGATTTTGTGATTTTGGGCGGCGCCATCATCGGCATGTCGACCGCCAGGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTGGCTTGAAAAAGATCCCGCCCCGGCCTGTCCCCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTg < 2:536309‑M2/202‑1 (MQ=255) cgacaagctctattgattacgttgggcctaaacgcagggagactccccGCGCAAAGGGATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGCCCGCCATGCAACTGATTGATGTCCATCCGGACGCCCGCATTGCGGTGCTGGAAAAAGAGTCCGCCCCGGCCTGGCACCAGACGGGCCACCACAGCGGCGGGAGCAANGCCGGGGTCTATTAAACGTGCGGCAGACTg > 2:270706‑M2/49‑250 (MQ=255) gaaaagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCCGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGa > 1:60574‑M2/48‑250 (MQ=255) aagctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACg > 1:61297‑M2/45‑234 (MQ=255) gctctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGTAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGgcgc > 1:567888‑M2/43‑251 (MQ=255) tctattgtttacgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGgcgc > 1:563235‑M2/41‑249 (MQ=255) ctattgtttacgtggggcttaaacgcagggagactccccGCGCAAAGGAATTGAGCGGAGGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCa < 1:240962‑M2/210‑1 (MQ=255) gtttacgttgggccaaaccgcagggagactccccGCCCAAAGGAATTGAGCGGTTGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGCCGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCCCCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGc < 1:436784‑M2/217‑1 (MQ=255) gtttacgttgggactaaacgcagggagactccccGCGCAAAGGAATGGAGCGGAGGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGc < 1:550975‑M2/217‑1 (MQ=255) acgttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTgg > 2:403660‑M2/31‑251 (MQ=255) gttgggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTTTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACCCGTCCGGCAGCCTGAAGGCGCAGTTTTTCCTGGCg > 1:438176‑M2/29‑251 (MQ=255) gggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGATTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCggg < 1:4196‑M2/225‑1 (MQ=255) ggcctaaacgcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGa > 1:132880‑M2/25‑250 (MQ=255) ccctaaacgcagggagactccccGCGCAAAGGAATGGGGCGGATTTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGCCCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCTTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGaaa < 1:480219‑M2/228‑1 (MQ=255) taaacgcagggagaccccccGCGCAAAGGAATTGAGGGGATGTATGGTTTTTTGATTATGGGGGGCGGCATCCTCGGCATGGCGACCGCCATGCAACTGATTGATGTCTACCCGGCCGCCCGCATGGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCGGTCCCCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAAcc < 2:5617‑M2/230‑1 (MQ=255) aaacgcagggagactccccGCGCAAAGGCATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACcgc > 1:420044‑M2/20‑251 (MQ=255) gcagggagactccccGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGAGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGGTTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGcc > 1:262384‑M2/16‑250 (MQ=255) cccccGCGCAAAGGAATTGAGCGGATGTTTGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCtt < 1:164257‑M2/246‑1 (MQ=255) cGCGCAAGGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGCCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGc < 1:453952‑M2/250‑1 (MQ=255) cGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCCCGCCACCAAAGCCTTTTGc > 1:252170‑M2/2‑251 (MQ=255) gcgcAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGCCCGCCATGCAACTGATTGATGTCTATCCGGCCGCCCGCATTGCGTTGCTGGAAAAAGAGCCCGCCCCGGCCTGTCCCCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGTCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCg < 1:554424/251‑1 (MQ=255) | AGTTCGTCCAGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAAGCGCAAAGGAATTGAGCGGATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCG > NC_000913/2789721‑2790213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |