| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,756,159 | Δ33,804 bp | [intA]–[glaH] | 28 genes [intA], yfjH, alpA, yfjI, yfjJ, abpB, abpA, yfjM, rnlA, rnlB, yfjP, yfjQ, yfjR, ypjK, yfjS, yfjT, yfjU, yfjW, yfjX, yfjY, ypjJ, yfjZ, ypjF, ypjA, ypjB, ypjC, ileY, [glaH] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2756159 | 2789962 | 33804 | 69 [0] | [0] 70 | [intA]–[glaH] | [intA],yfjH,alpA,yfjI,yfjJ,abpB,abpA,yfjM,rnlA,rnlB,yfjP,yfjQ,yfjR,ypjK,yfjS,yfjT,yfjU,yfjW,yfjX,yfjY,ypjJ,yfjZ,ypjF,ypjA,ypjB,ypjC,ileY,[glaH] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2756158 | 0 (0.000) | 69 (0.950) | 62/492 | 0.0 | 100% | intergenic (+203/‑1) | ssrA/intA | tmRNA/integrase IntA |
| ? | NC_000913 | 2789963 = | 0 (0.000) | intergenic (+1/‑19) | glaH/lhgD | glutarate dioxygenase GlaH/L‑2‑hydroxyglutarate dehydrogenase | |||||
GAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGA > NC_000913/2755917‑2756408 | gAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGACGAGAACTAATTAAATCCGAAACTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCAATTGTTTCCGTTGGGCCTAAACGCAGGGAGACTCCCCgcgccaagg > 2:17459‑M1/1‑242 (MQ=255) aaTTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaagg > 1:411519‑M1/1‑241 (MQ=255) cGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgg > 1:170525‑M1/1‑236 (MQ=255) ggACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTACTTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAANGCAGGGAGACTCCCCgcgccaaggacttg > 2:284571‑M1/1‑235 (MQ=255) ggACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGCCTCCCCgcgcaaaggaattgcg > 2:553047‑M1/1‑235 (MQ=255) gtcAACCCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCAGCCGATGAAGTCCTAAGAGCCCGCCCGGCGCAAGCCCGTCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGGCCGAAGAGAACTAATTAAAGCCGAACCTTGTAGGCCCATTGATAGGCCCAACGAAAAGCGCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCtcgcaaaggaattgatcgtatttat < 2:226586‑M1/250‑26 (MQ=255) cctCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCTCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGTGAGACTCCCCgcgcaaaggaattgagcggatgtatgatt < 1:485668‑M1/250‑30 (MQ=255) cccccgcCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattt < 1:454212‑M1/249‑31 (MQ=255) cccGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGCACCTTTTAGGCCCATTGATAGGCCCAACGAAACGCTCTAATGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaagtaattgagcggctggatgattttg > 2:550975‑M1/1‑219 (MQ=255) caccaAAATTCGCCAGCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCTCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAAGCCGAACCTTTTAGGCCCATTGATAGGCCCAACTAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGGCTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggc < 2:448572‑M1/251‑44 (MQ=255) ggTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcat > 1:554549‑M1/1‑191 (MQ=255) gATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCCCGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtc < 2:130904‑M1/251‑64 (MQ=255) tACCAGAATCATCCGATGAAGTCCTAAGAGCCCGCGCGGCTCAAGCCCTGCGGGCTTTGTTGTGCCCTCAAT‑GTGTCCCGCGAAGTCCGAAGAGAAGTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTTGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcga < 2:242814‑M1/250‑66 (MQ=255) aCCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgacc < 2:210575‑M1/251‑68 (MQ=255) gTCATCCGATGAAGGCCAAAGAGCCCGCACGGGGCAAGCCCTGGGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGCCCGAAGAGAACTAATAAAATCCGACCCTTTTAGGCCCATTGATAGGCCCAACAAAAAGCTCTATTGTTTACGTGGGGCCTAAACGCAGGGAGCCTCCCCgcgcaaaggaattgagcggatgtatgtttttgtgattattggcggcggcatcatcggcatgtggaccgccatg < 2:100254‑M1/251‑74 (MQ=255) cGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactg > 1:225279‑M1/1‑172 (MQ=255) tGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggcattgagcggatgtatgattttgtgatgattggcggcggcataatcggcatgtcgaccgccatgcaactgatt > 2:444737‑M1/1‑169 (MQ=255) gAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcacaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattg > 2:234270‑M1/1‑168 (MQ=255) aaGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattg > 1:131384‑M1/1‑167 (MQ=255) gTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatg < 2:170525‑M1/251‑87 (MQ=255) aaGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGACCCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaacggaattgagcggatgtatgattttgtgattattggcggcggcatcctcggcatgtcgaccgccatgccactgattgttgtctat > 2:543332‑M1/1‑160 (MQ=255) cccGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGCAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgnccgccatgccactgattgatgtatatccggg > 2:297358‑M1/1‑155 (MQ=255) ccGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgccaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggac > 1:346128‑M1/1‑154 (MQ=255) ggCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATACGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggaatgtcgaccgccatgcaactgattgttgtctatccggacgcccgc > 1:249765‑M1/1‑148 (MQ=255) cAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcacaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatggcgaacgccatgcaactgattgaagtctatccggacgcccgcattg > 2:554424‑M1/1‑144 (MQ=255) aaGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccctgccactgattgatgtctatccggacgcccgcattgc > 1:122285‑M1/1‑143 (MQ=255) gtgggtttttgtgtgcccTCAATGTTG‑CCCGCGAAGTCCGAAGAGAACTAATTAAAGCCGATCCTTTTAGGCCCATTGATAGGCCCATCGAAAAGCTCTATTGATTACGGTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgct < 2:346128‑M1/244‑115 (MQ=255) ttGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagt > 1:173217‑M1/1‑126 (MQ=255) tgCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatggatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccg > 2:195978‑M1/1‑123 (MQ=255) ccTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccc > 1:56860‑M1/1‑120 (MQ=255) cccGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcac < 1:196750‑M1/251‑143 (MQ=255) ccGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggcc < 1:573677‑M1/251‑153 (MQ=255) cGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGCGACTCACCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcctcatcggcatgtcgaccgccatgaaactgattgatgtatatacggacgcccgccgtgcgtttctggaaaaagtgtccgccccggcctgtccccagaagggcc > 2:580557‑M1/1‑98 (MQ=255) gagaACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcaccggcatgtcgaccgccatgcaaatgattgagttctttccggacgcccgccttgcggtgctggaaaaagagtccgccccgggctgtcaccagacaggccacaa > 2:9560‑M1/1‑94 (MQ=255) aaacTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTCCGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacag < 1:312903‑M1/250‑160 (MQ=255) aaacTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACTTTGGGCCTAAACGCAGGGATACTCCCCgcgcaaagtaattgagcggatgtatgattttgtgatttttggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgcgggaaaaagagtccgccccggcctgtcaccagacgggccacaacag < 1:351544‑M1/250‑160 (MQ=255) aaCTAATTAAATCCGAACCGTTTAGGCCTATTGATGGGCCCACCGAAAAGCTCTATTTTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaatggatttgagcggatttatgattttgtgattattggcggctgcatcatcggcatgtcgaccgccatgcaactgattgatgtctttccggacgcccgcattgcgttgcgggaaaaagagtccgccccggcctgtctccagacgggccacaacagc < 1:76141‑M1/251‑161 (MQ=255) aaTTAAATCCGAACCTTTTAGGCCCATTGATATGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggtattgagcggatgtatgattttgtgaattttggcggcggcatcatcggcatgttgaccgccatgcaactgctttgtgcctatcccgtcacccgcattgcgttgctggcaaaagagtcggccccggcctttcaccagaacggccacaacaacgacg > 2:545247‑M1/1‑87 (MQ=255) aTTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccgncccgtcaccagccgggccccaacagcggcgg > 2:290388‑M1/1‑86 (MQ=255) aaTCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatc < 1:234270‑M1/251‑170 (MQ=255) gAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaaccgcggcgtgaaccatgc > 1:498970‑M1/1‑77 (MQ=255) gAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccctgc > 1:121020‑M1/1‑77 (MQ=255) aCCTTTTAGGCCCATTGATAGGCACAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatggcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccaaaacagcggcgtgctccatgccg > 1:40510‑M1/1‑75 (MQ=255) ccTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccctgccgg > 1:15177‑M1/1‑74 (MQ=255) ggCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctat > 1:488125‑M1/1‑67 (MQ=255) gCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgcttgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccaaaacagcggcgggatccatgccggggtctatt > 1:356870‑M1/1‑66 (MQ=255) cgacgcgcgtccgatctaagttctattgtttacgttgggcctaaaCGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtagtattttgtgattattggcggcggcatcatcggcaggtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacg < 2:61297‑M1/230‑191 (MQ=255) ccAACGAAAACCTATAGTGTTTTCGTTGGGCCTAAACGCAGGGAGCCCCCCCgcgcaaaggaattgagcgaatgtatgattttgtgattattggcggcggcatcaccggcatgtcgaccgccatgcaacggattgatgtctatccggacgcccgcgttgcgttgctggaaaaagggtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagc < 2:99896‑M1/251‑200 (MQ=255) caacaaAAAGCTCTTTTGTTTACGTTGGGCCAAAACGAGGGGAGACCCCCCgcgcaaagaaattgggcggatgtatgattttgtgattattggcggcgccatcaccggcatgtcgaccgccatgcaactgattgatgtctacccggacgcccgcattgcgttgctggaaaaagagtcccccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcc < 2:530359‑M1/251‑201 (MQ=255) cctaaaagctCTATTTTTTACGTTGGGCCTAACCGCAGGGAAACCCCCCgcgcaagggaattgaggggatgtatgattttgtgattttgggcggcgccatcatcggcatgtcgaccgccaggcaactgattgatgtctatccggacgcccgcattgcgtggcttgaaaaagatcccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctg < 2:536309‑M1/248‑203 (MQ=255) cgacaagctcTATTGATTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaagggattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgcccgccatgcaactgattgatgtccatccggacgcccgcattgcggtgctggaaaaagagtccgccccggcctggcaccagacgggccaccacagcggcgggagcaangccggggtctattaaacgtgcggcagactg > 2:270706‑M1/5‑48 (MQ=255) gAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcacccgacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctga > 1:60574‑M1/1‑47 (MQ=255) aaGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacg > 1:61297‑M1/1‑44 (MQ=255) gCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaagtaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgc > 1:567888‑M1/1‑42 (MQ=255) tctATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgc > 1:563235‑M1/1‑40 (MQ=255) ctATTGTTTACGTGGGGCTTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggaggtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgca < 1:240962‑M1/249‑211 (MQ=255) gTTTACGTTGGGCCAAACCGCAGGGAGACTCCCCgcccaaaggaattgagcggttgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggccgcccgcattgcgttgctggaaaaagagtccgccccggcctgtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgc < 1:436784‑M1/251‑218 (MQ=255) gTTTACGTTGGGACTAAACGCAGGGAGACTCCCCgcgcaaaggaatggagcggaggtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgc < 1:550975‑M1/251‑218 (MQ=255) aCGTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctgg > 2:403660‑M1/1‑30 (MQ=255) gTTGGGCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctttcaccagacgggccacaacagcggcgtgatccatgccggggtctattacccgtccggcagcctgaaggcgcagtttttcctggcg > 1:438176‑M1/1‑28 (MQ=255) gggCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagattccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcggg < 1:4196‑M1/250‑226 (MQ=255) ggCCTAAACGCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcggga > 1:132880‑M1/1‑24 (MQ=255) ccctAAACGCAGGGAGACTCCCCgcgcaaaggaatggggcggatttatgattttgtgattattggcggcggcatcatcggcatgtcgcccgccatgcaactgattgatgtctatccggacgcccgcattgctttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaa < 1:480219‑M1/250‑229 (MQ=255) tAAACGCAGGGAGACCCCCCgcgcaaaggaattgaggggatgtatggttttttgattatggggggcggcatcctcggcatggcgaccgccatgcaactgattgatgtctacccggccgcccgcatggcgttgctggaaaaagagtccgccccggccggtccccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaacc < 2:5617‑M1/250‑231 (MQ=255) aaaCGCAGGGAGACTCCCCgcgcaaaggcattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgc > 1:420044‑M1/1‑19 (MQ=255) gCAGGGAGACTCCCCgcgcaaaggaattgagcggatgtatgattttgtgattattggaggcggcatcatcggcatgtcgaccgccatgcaactggttgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgcc > 1:262384‑M1/1‑15 (MQ=255) cccccgcgcaaaggaattgagcggatgtttgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccaccaaagcctt < 1:164257‑M1/250‑247 (MQ=255) cgcgcaagggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagcccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccgcgccaccaaagccttttgc < 1:453952‑M1/251‑251 (MQ=255) cgcgcaaaggaattgagcggatgtatgattttgtgattattggcggcggcatcatcggcatgtcgaccgccatgcaactgattgatgtctatccggacgcccgcattgcgttgctggaaaaagagtccgccccggcctgtcaccagacgggccacaacagcggcgtgatccatgccggggtctattacacgtccggcagcctgaaggcgcagttttgcctggcgggaaaccccgccaccaaagccttttgc > 1:252170‑M1/1‑1 (MQ=255) | GAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAATTCTCCATCGGTGATTACCAGAGTCATCCGATGAAGTCCTAAGAGCCCGCACGGCGCAAGCCCTGCGGGCTTTTTTGTGCCCTCAAT‑TTGTCCCGCGAAGTCCGAAGAGAACTAATTAAATCCGAACCTTTTAGGCCCATTGATAGGCCCAACGAAAAGCTCTATTGTTTACGTTGGGCCTAAACGCAGGGAGACTCCCCATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGA > NC_000913/2755917‑2756408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |