Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,101,395 Δ11,672 bp wbbLrfbB wbbL, insH7, wbbL, wbbK, wbbJ, wbbI, wbbH, glf, rfbX, rfbC, rfbA, rfbD, rfbB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2101395 2113066 11672 61 [0] [0] 60 wbbL–rfbB wbbL,insH7,wbbL,wbbK,wbbJ,wbbI,wbbH,glf,rfbX,rfbC,rfbA,rfbD,rfbB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 21013940 (0.000)60 (0.830) 56/488 0.1 100% intergenic (‑126/+2) gnd/wbbL 6‑phosphogluconate dehydrogenase, decarboxylating/interrupted rhamnosyltransferase WbbL
?NC_000913 2113067 = 0 (0.000)intergenic (‑6/+367) rfbB/galF dTDP‑glucose 4,6‑dehydratase 1/UTP:glucose‑1‑phosphate uridylyltransferase, low activity

ACTTCTTCCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATATTACGGGTGAAAAACTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGC  >  NC_000913/2101144‑2101640
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      
aCTTCTTCCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTtat                                                                                                                                                                                                                                                        <  1:482350/251‑1 (MQ=255)
   tcttcCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATtt                                                                                                                                                                                                                                                      <  1:218142‑M1/250‑3 (MQ=255)
       ccGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattcc                                                                                                                                                                                                                                                 >  1:527521‑M1/1‑244 (MQ=255)
          tcttctCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccat                                                                                                                                                                                                                                               >  1:206933‑M1/1‑241 (MQ=255)
                     gAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcag                                                                                                                                                                                                                                     >  2:98205‑M1/1‑230 (MQ=255)
                          gTTGAAAATAGAGACGGTATAACCATGGTTTTCGATGTTGAGCGCAAGGTTGCGTCCTATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattcctgcagagcatgc                                                                                                                                                                                                                              <  2:7218‑M1/251‑27 (MQ=255)
                            tGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgct                                                                                                                                                                                                                             <  1:282191‑M1/250‑28 (MQ=255)
                               aaaTAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCCCTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATCCTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtg                                                                                                                                                                                                                          >  1:287092‑M1/1‑220 (MQ=255)
                                    gagaCGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCCTAACGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGAGATCACCGCGCTGCATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttcttccatattacttcagagcatgctgtgaaata                                                                                                                                                                                                                     >  1:552564‑M1/1‑215 (MQ=255)
                                       aCGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcg                                                                                                                                                                                                                 >  1:257800‑M1/1‑212 (MQ=255)
                                                               ttGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggt                                                                                                                                                                                         >  1:526829‑M1/1‑188 (MQ=255)
                                                                tGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatg                                                                                                                                                                                                                               <  2:339321‑M1/212‑26 (MQ=255)
                                                                tGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatg                                                                                                                                                                                                                               >  1:339321‑M1/1‑187 (MQ=255)
                                                                                      cACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGCATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctg                                                                                                                                                                  >  2:576887‑M1/1‑165 (MQ=255)
                                                                                          gCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctt                                                                                                                                                              <  1:128324‑M1/251‑91 (MQ=255)
                                                                                          gCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggct                                                                                                                                                               <  1:181567‑M1/250‑90 (MQ=255)
                                                                                             aTACCGACTACGCCGCTCAGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGACTGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGAACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttcttccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttac                                                                                                                                                           >  2:477325‑M1/1‑158 (MQ=255)
                                                                                                   aCTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACACAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctac                                                                                                                                                     >  2:387484‑M1/1‑152 (MQ=255)
                                                                                                    cTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTCCGGCTTTATttattccatattacttc                                                                                                                                                                                                                                       <  1:65891‑M1/168‑18 (MQ=255)
                                                                                                    cTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttc                                                                                                                                                                                                                                       >  2:65891‑M1/1‑151 (MQ=255)
                                                                                                        gCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccag                                                                                                                                                  >  1:165604‑M1/1‑147 (MQ=255)
                                                                                                            aTCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcact                                                                                                                                            >  1:352325‑M1/1‑143 (MQ=255)
                                                                                                                gTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgt                                                                                                                                        <  1:406095‑M1/251‑113 (MQ=255)
                                                                                                                gTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcac                                                                                                                                             <  1:98205‑M1/246‑108 (MQ=255)
                                                                                                                  tGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgc                                                                                                                                      >  1:413954‑M1/1‑137 (MQ=255)
                                                                                                                       ggatattacATACTCCTGGCAGGTGTGATCACCGCGCTGAAGGCTCTCTGCCGTGAATGTTCGCAAATAAGTATACAAATTACTTATTAAATAATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgataaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagccctgcgtgcatgcc                                                                                                                                 <  2:441637‑M1/247‑120 (MQ=255)
                                                                                                                              aCATTCTCCTGTCAGGTGTGATCACCGCGCTGAAGGCTCGTGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatatttcttcagagcatgctgggaaataagcggctctcagtttgtttaatagaggtattaatgcacgctaccgcacctggctttacagcttccagagcactgcgtgcatgcctatgat                                                                                                                           <  1:301593‑M1/250‑126 (MQ=255)
                                                                                                                                          cAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgtt                                                                                                               <  1:293136‑M1/250‑138 (MQ=255)
                                                                                                                                                  aTCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgct                                                                                                                                                                                                                             >  1:496033‑M1/1‑105 (MQ=255)
                                                                                                                                                  aTCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgct                                                                                                                                                                                                                             <  2:496033‑M1/132‑28 (MQ=255)
                                                                                                                                                          gcTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagaactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctacac                                                                                              >  2:522368‑M1/1‑97 (MQ=255)
                                                                                                                                                             gAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccg                                                                                           >  2:452446‑M1/1‑94 (MQ=255)
                                                                                                                                                               aTGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaa                                                                                         <  1:452446‑M1/251‑160 (MQ=255)
                                                                                                                                                                tGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaa                                                                                         >  1:313243‑M1/1‑91 (MQ=255)
                                                                                                                                                                 gCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAATTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaa                                                                                        <  2:150336‑M1/250‑161 (MQ=255)
                                                                                                                                                                           gggaATGGTCGCAAATAAGTATAAAAAGTACGTATTAAAGTATAAAAAACTTATCCATGCTTATCTGTTTACGGCTTTATttattccatattactgcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggcttgacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccgctagcgctaaacttgaaaaattcaaacg                                                                              <  2:61626‑M1/249‑171 (MQ=255)
                                                                                                                                                                            ggAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgct                                                                            >  1:364613‑M1/1‑79 (MQ=255)
                                                                                                                                                                             gAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgcta                                                                           <  1:121516‑M1/251‑174 (MQ=255)
                                                                                                                                                                             gAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggaattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgcataattcaaacgct                                                                            >  2:58288‑M1/1‑78 (MQ=255)
                                                                                                                                                                              aaTGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgcta                                                                           >  1:213846‑M1/1‑77 (MQ=255)
                                                                                                                                                                                   tCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtc                                                                     >  1:538788‑M1/1‑72 (MQ=255)
                                                                                                                                                                                    cGCAAATAAGTAGACAAAGTTCTTATTAAAGTATAAATAGCATATCCAGGCTTATATGCTTACGGCTTTATttattccatattacgtcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgactatgatgtgacgagcgttacccactcgcgctaaccccgaaaaattcaaacgctaattgtc                                                                     <  2:410355‑M1/250‑180 (MQ=255)
                                                                                                                                                                                     gCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtctt                                                                   <  2:158363‑M1/251‑182 (MQ=255)
                                                                                                                                                                                        aaTAAGTATACAAAGTCCTTATAAAAGTAAANATAGCTTACCCAGGCTTATATGCTTACGGATTTATttattccatattacttcatagcatgcttggaaataagcggctctcattttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttacc                                                                <  2:261664‑M1/251‑185 (MQ=255)
                                                                                                                                                                                        aaTAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttacc                                                                >  1:105492‑M1/1‑67 (MQ=255)
                                                                                                                                                                                           aaGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaat                                                             <  1:508742‑M1/251‑188 (MQ=255)
                                                                                                                                                                                           aaGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaa                                                              <  1:565931‑M1/250‑187 (MQ=255)
                                                                                                                                                                                                              taAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttacc                                                                >  2:198500‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                              taAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttacc                                                                <  1:198500‑M1/229‑185 (MQ=255)
                                                                                                                                                                                                                    ataAATAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcct                                    <  1:86628‑M1/251‑213 (MQ=255)
                                                                                                                                                                                                                      aaaTAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctgg                                  <  1:522368‑M1/251‑215 (MQ=255)
                                                                                                                                                                                                                      aaaTAGCTTATCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgatctggaaacaaggaaaatcctgg                                  >  1:110654‑M1/1‑37 (MQ=255)
                                                                                                                                                                                                                        agagcTTAGCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgaacgctaccgcccctggctttacagctaccagagcactgcgagcatgcctctgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaatggtcttaccactccgcactggaaccaaggaaaatcatgga                                 >  2:87304‑M1/3‑35 (MQ=255)
                                                                                                                                                                                                                              tATCCATGCTTATATGTTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactt                           <  2:78669‑M1/250‑222 (MQ=255)
                                                                                                                                                                                                                               aTCCATGCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgccttaccaatccgctctggaaacaaggaaaatcctggaaaactttg                         >  1:536021‑M1/1‑28 (MQ=255)
                                                                                                                                                                                                                                     gCTTATATGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataa                    >  2:71761‑M1/1‑22 (MQ=255)
                                                                                                                                                                                                                                        tataTGCTTACGGTTTTTTttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaagccgctctggaaacaaggaaaatcctggaaaactttgaataaaa                  <  2:352325‑M1/249‑231 (MQ=255)
                                                                                                                                                                                                                                           atGCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccct              >  1:6304‑M1/1‑16 (MQ=255)
                                                                                                                                                                                                                                             gCTTACGGCTTTATttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaatccctac            <  2:179114‑M1/250‑237 (MQ=255)
                                                                                                                                                                                                                                                tACGGTTTTATttattccatattactgcagngcatgctgttaaataggcggctctcagtttgattaatagaggtattaaggcccgctaccgcccctgtctttacagttaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctactgc         <  2:275209‑M1/250‑240 (MQ=255)
                                                                                                                                                                                                                                                       ttatttattccatattacttcagagcatgctgtgaaataagcggctctcagtttgattaatagaggtattaatgcacgctaccgcccctggctttacagctaccagagcactgcgtgcatgcctatgatgtgacgagcgttacccactcgcgctaaacccgaaaaattcaaacgctaattgtcttaccaatccgctctggaaacaaggaaaatcctggaaaactttgaataaaaccctactgctaactcg  <  1:71761‑M1/250‑247 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                      
ACTTCTTCCGTCTTCTCACGGGAACGGTTGAAAATAGAGACGGTATAACCACGGCTTTCGATGTTGAGCGCAAGGTTGCGTCCCATCACTGCCATACCGACTACGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATATTACGGGTGAAAAACTGATGAAATTCGATCAAAGTTGCGATTTGATAAAATACGTTTTCTGGCTAAATATCTAAAAGTACTTTTTAAGTGCCATCTGAAGGCTTTTGAAAAAAAACTTCGATTGTCATGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGC  >  NC_000913/2101144‑2101640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: